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Carg10954 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10954
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHR-like lesion-inducing protein-related protein
Genome locationCarg_Chr08:6451960..6453473
RNA-Seq ExpressionCarg10954
SyntenyCarg10954
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008637 - HR-like lesion-inducer


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593847.1 hypothetical protein SDJN03_13323, partial [Cucurbita argyrosperma subsp. sororia]9.8e-6599.25Show/hide
Query:  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFL
        FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFL
Subjt:  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFL

Query:  LHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
        LHVALAGALLFF GTKNSISRRQQKKKAHKAKTN
Subjt:  LHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN

KAG7026179.1 hypothetical protein SDJN02_12678, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-94100Show/hide
Query:  MCQQEAELRMGVDTRRCASKGVDWGCPTSIVEGTSDNEDARASMYRFNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGG
        MCQQEAELRMGVDTRRCASKGVDWGCPTSIVEGTSDNEDARASMYRFNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGG
Subjt:  MCQQEAELRMGVDTRRCASKGVDWGCPTSIVEGTSDNEDARASMYRFNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGG

Query:  LLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
        LLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
Subjt:  LLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN

XP_022930412.1 uncharacterized protein LOC111436866 [Cucurbita moschata]9.8e-6599.25Show/hide
Query:  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFL
        FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLN FL
Subjt:  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFL

Query:  LHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
        LHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
Subjt:  LHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN

XP_023000553.1 uncharacterized protein LOC111494794 [Cucurbita maxima]1.4e-6397.76Show/hide
Query:  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFL
        FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFV GSQIGA+LLLLYLAISSPILFDFFNYGRGNSQY+LLLNDFL
Subjt:  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFL

Query:  LHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
        LHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
Subjt:  LHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN

XP_023513661.1 uncharacterized protein LOC111778204 [Cucurbita pepo subsp. pepo]1.7e-6497.78Show/hide
Query:  RFNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDF
        +FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLP IDVSHLVAAFLSLKGIGGLLFVFGSQIGA+LLLLYLAISSPILFDFFNYGRGNSQYSLLLNDF
Subjt:  RFNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDF

Query:  LLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
        LLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
Subjt:  LLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN

TrEMBL top hitse value%identityAlignment
A0A5A7VEG5 Uncharacterized protein5.1e-5985.71Show/hide
Query:  RASMYRFNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSL
        +AS +RFNEFGTDGG AAKELLPKLNT R N SARFGF+LPVIDVSHLVAAFLSLKGIGGLLFVFGS IGA+LLLLYLAIS+PIL+DFFNYGR NSQ+ +
Subjt:  RASMYRFNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSL

Query:  LLNDFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
        L+NDF+LHVALAGALLFFIGTKNSI R+QQKKKAHKAKTN
Subjt:  LLNDFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN

A0A6J1EQF2 uncharacterized protein LOC1114368664.8e-6599.25Show/hide
Query:  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFL
        FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLN FL
Subjt:  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFL

Query:  LHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
        LHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
Subjt:  LHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN

A0A6J1H651 uncharacterized protein LOC1114599551.9e-5889.55Show/hide
Query:  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFL
        FNEFGTDGGPAAKEL+PK+ TLR NVSARFGF LPVIDVSHLVAAFLSLKGIGGLLFVFGS IGA+LLLLYLAIS+PIL+DFFNYGR  SQ+S+L+NDFL
Subjt:  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFL

Query:  LHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
        LHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
Subjt:  LHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN

A0A6J1KMY5 uncharacterized protein LOC1114947946.9e-6497.76Show/hide
Query:  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFL
        FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFV GSQIGA+LLLLYLAISSPILFDFFNYGRGNSQY+LLLNDFL
Subjt:  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFL

Query:  LHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
        LHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
Subjt:  LHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN

A0A6J1L5U1 uncharacterized protein LOC1114993951.5e-5889.55Show/hide
Query:  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFL
        FNEFGTDGGPAAKEL+PKL TLR NVSA+FGF+LPVIDVSHLVAAFLSLKGIGGLLFVFGS IGA+LLLLYLAIS+PIL+DFFNYGR  SQ+S+L+NDFL
Subjt:  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFL

Query:  LHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
        LHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
Subjt:  LHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04340.1 HR-like lesion-inducing protein-related1.1e-3456.72Show/hide
Query:  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFL
        FN+FGTDGGPAAKEL PKL+  ++++S+  G +LP ++V  +V A ++LKG+GGLLFV G+  GA+LL +YL + SPIL+DF+NYG  + Q+SLLL +FL
Subjt:  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFL

Query:  LHVALAGALLFFIGTKNSI--SRRQQKKKAHKAK
          VAL GALLFFIG KNS   S+R  KK+  K K
Subjt:  LHVALAGALLFFIGTKNSI--SRRQQKKKAHKAK

AT3G23175.1 HR-like lesion-inducing protein-related7.6e-0731.5Show/hide
Query:  GTDGGPAAKELLPKLNTLRSNVSAR----FGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFL
        G  GGP  K + P +N L    S      FG  +   DV  +  A +S K    L F+FG  I A+ LL     S+ I F               LNDF 
Subjt:  GTDGGPAAKELLPKLNTLRSNVSAR----FGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFL

Query:  LHVALAGALLFFIGTKNSISRRQQKKK
         ++ L GALL++IG K+++     ++K
Subjt:  LHVALAGALLFFIGTKNSISRRQQKKK

AT3G23190.1 HR-like lesion-inducing protein-related3.1e-0836.26Show/hide
Query:  GPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDF
        G AA EL PKL    +   A             +VA  + +K +GG+LF+F + +GA LLL+Y AI SPIL+DF+N       +++    F
Subjt:  GPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDF

AT4G14420.1 HR-like lesion-inducing protein-related1.2e-3153.33Show/hide
Query:  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFL
        FN+FG DGG +AK L PK N   ++V+   G  LP +D+  LVAA ++LKGIGGLLFVFGS +GA+LLLL+ A+++PIL+DF+NY     ++  L + F 
Subjt:  FNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFL

Query:  LHVALAGALLFFIGTKNSISR-RQQKKKAHKAKTN
          +AL G LLFFIG KNS    RQ +KKA KAK N
Subjt:  LHVALAGALLFFIGTKNSISR-RQQKKKAHKAKTN

AT5G43460.1 HR-like lesion-inducing protein-related2.6e-3154.33Show/hide
Query:  DGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFLLHVALA
        DGGPAAKEL PKL+ +++++S+R G  LP I+V  +VA  ++LKG+GGLLFV G+  GA+LL  YL +  PIL+DF+NYG     +SLLL +FL  VAL 
Subjt:  DGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIGAHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFLLHVALA

Query:  GALLFFIGTKNSI-SRRQQKKKAHKAK
        GALLFFIG KNS  +++  KK+  K K
Subjt:  GALLFFIGTKNSI-SRRQQKKKAHKAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCCAGCAGGAAGCTGAGCTCCGAATGGGGGTGGACACGAGGCGGTGTGCTAGCAAGGGGGTGGATTGGGGATGTCCCACATCGATTGTAGAAGGGACGAGTGACAA
CGAGGACGCTAGGGCGTCTATGTATAGGTTCAACGAGTTTGGCACTGATGGTGGACCTGCTGCAAAGGAATTGCTTCCAAAGTTGAACACTCTTAGGTCAAACGTCTCTG
CTAGATTTGGATTCAACCTTCCTGTCATTGATGTTTCCCATTTAGTTGCTGCATTCCTGTCTCTGAAAGGCATTGGCGGGCTACTCTTTGTTTTTGGGAGTCAGATTGGA
GCTCATCTTCTGCTTCTCTACTTGGCAATTAGCAGCCCAATTCTGTTTGATTTCTTCAACTATGGCCGTGGGAATTCCCAATATAGCCTACTATTGAATGACTTCTTATT
GCACGTCGCACTTGCTGGTGCATTGCTCTTCTTCATCGGCACGAAGAACTCGATTTCGAGGAGGCAACAGAAGAAGAAGGCACACAAAGCCAAAACAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGCCAGCAGGAAGCTGAGCTCCGAATGGGGGTGGACACGAGGCGGTGTGCTAGCAAGGGGGTGGATTGGGGATGTCCCACATCGATTGTAGAAGGGACGAGTGACAA
CGAGGACGCTAGGGCGTCTATGTATAGGTTCAACGAGTTTGGCACTGATGGTGGACCTGCTGCAAAGGAATTGCTTCCAAAGTTGAACACTCTTAGGTCAAACGTCTCTG
CTAGATTTGGATTCAACCTTCCTGTCATTGATGTTTCCCATTTAGTTGCTGCATTCCTGTCTCTGAAAGGCATTGGCGGGCTACTCTTTGTTTTTGGGAGTCAGATTGGA
GCTCATCTTCTGCTTCTCTACTTGGCAATTAGCAGCCCAATTCTGTTTGATTTCTTCAACTATGGCCGTGGGAATTCCCAATATAGCCTACTATTGAATGACTTCTTATT
GCACGTCGCACTTGCTGGTGCATTGCTCTTCTTCATCGGCACGAAGAACTCGATTTCGAGGAGGCAACAGAAGAAGAAGGCACACAAAGCCAAAACAAACTAGAAATGTA
AGAGAAACCACTACTTCAACTCGA
Protein sequenceShow/hide protein sequence
MCQQEAELRMGVDTRRCASKGVDWGCPTSIVEGTSDNEDARASMYRFNEFGTDGGPAAKELLPKLNTLRSNVSARFGFNLPVIDVSHLVAAFLSLKGIGGLLFVFGSQIG
AHLLLLYLAISSPILFDFFNYGRGNSQYSLLLNDFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN