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Carg10963 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10963
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionrepetitive proline-rich cell wall protein 3-like
Genome locationCarg_Chr08:6413469..6413744
RNA-Seq ExpressionCarg10963
SyntenyCarg10963
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
POE15980.1 hypothetical protein BV923_23575 [Pectobacterium odoriferum]7.3e-2472.63Show/hide
Query:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYR----KRPYKKYPPYKRYPPYKKRPPYKKYPPSSN
        MF+KYFLLLLLAVVLLTTTQALKHPSDS  EVIP+++++LP+TT T+T+P    EESKFY+    KRPY K PPYK+YPPYKK PPYKKYPPSS+
Subjt:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYR----KRPYKKYPPYKRYPPYKKRPPYKKYPPSSN

WP_219729224.1 hypothetical protein, partial [Pectobacterium odoriferum]7.3e-2472.63Show/hide
Query:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYR----KRPYKKYPPYKRYPPYKKRPPYKKYPPSSN
        MF+KYFLLLLLAVVLLTTTQALKHPSDS  EVIP+++++LP+TT T+T+P    EESKFY+    KRPY K PPYK+YPPYKK PPYKKYPPSS+
Subjt:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYR----KRPYKKYPPYKRYPPYKKRPPYKKYPPSSN

XP_004147144.2 repetitive proline-rich cell wall protein 3 [Cucumis sativus]1.4e-1971.72Show/hide
Query:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIP---VSNQKLPSTTATDTEPASEHEESKFYR-----KRPYKKYPPYKRYPPYKKRPPYKKYPPSSN
        MF+KYFLLLLLAVVLLTTTQALKHPS+S  EVIP   V++ KLP TT TD      +EESKFYR     K+PYK+ PPYKRYPPYKKRPPYKKYPPSS+
Subjt:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIP---VSNQKLPSTTATDTEPASEHEESKFYR-----KRPYKKYPPYKRYPPYKKRPPYKKYPPSSN

XP_022930415.1 uncharacterized protein LOC111436870 [Cucurbita moschata]5.2e-3898.9Show/hide
Query:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYRKRPYKKYPPYKRYPPYKKRPPYKKYPPSSN
        MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYRKR YKKYPPYKRYPPYKKRPPYKKYPPSSN
Subjt:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYRKRPYKKYPPYKRYPPYKKRPPYKKYPPSSN

XP_023513909.1 repetitive proline-rich cell wall protein 3-like [Cucurbita pepo subsp. pepo]3.6e-39100Show/hide
Query:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYRKRPYKKYPPYKRYPPYKKRPPYKKYPPSSN
        MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYRKRPYKKYPPYKRYPPYKKRPPYKKYPPSSN
Subjt:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYRKRPYKKYPPYKRYPPYKKRPPYKKYPPSSN

TrEMBL top hitse value%identityAlignment
A0A0A0LI79 Uncharacterized protein6.9e-2071.72Show/hide
Query:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIP---VSNQKLPSTTATDTEPASEHEESKFYR-----KRPYKKYPPYKRYPPYKKRPPYKKYPPSSN
        MF+KYFLLLLLAVVLLTTTQALKHPS+S  EVIP   V++ KLP TT TD      +EESKFYR     K+PYK+ PPYKRYPPYKKRPPYKKYPPSS+
Subjt:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIP---VSNQKLPSTTATDTEPASEHEESKFYR-----KRPYKKYPPYKRYPPYKKRPPYKKYPPSSN

A0A0A0LNP2 Uncharacterized protein7.1e-1766.67Show/hide
Query:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIP---VSNQKLPSTTATDTEPASEHEESKFYR-----KRPYKKYPPYKRYPPYKKRPPYKKYPPSSN
        MF KYFLLLLLAVVLLTTTQALKHP +S  E IP   +++ KLP TT TD      +EESKF+R     K+PYK+ PPYK+YPPYKKRPPYKKYPPSS+
Subjt:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIP---VSNQKLPSTTATDTEPASEHEESKFYR-----KRPYKKYPPYKRYPPYKKRPPYKKYPPSSN

A0A1S3CE34 repetitive proline-rich cell wall protein 3-like1.9e-1764.58Show/hide
Query:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYR-----KRPYKKYPPYKRYPPYKKRPPYKKYPPSSN
        MF+KYFLLLLLA VLL+TTQALKHPS S  EVIP ++    +   T  +P   +EESKFYR     K+PYK+ PPYK+YPPYKKRPPYKKYPPSS+
Subjt:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYR-----KRPYKKYPPYKRYPPYKKRPPYKKYPPSSN

A0A5A7VEY7 Repetitive proline-rich cell wall protein 3-like1.9e-1764.58Show/hide
Query:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYR-----KRPYKKYPPYKRYPPYKKRPPYKKYPPSSN
        MF+KYFLLLLLA VLL+TTQALKHPS S  EVIP ++    +   T  +P   +EESKFYR     K+PYK+ PPYK+YPPYKKRPPYKKYPPSS+
Subjt:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYR-----KRPYKKYPPYKRYPPYKKRPPYKKYPPSSN

A0A6J1EWV3 uncharacterized protein LOC1114368702.5e-3898.9Show/hide
Query:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYRKRPYKKYPPYKRYPPYKKRPPYKKYPPSSN
        MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYRKR YKKYPPYKRYPPYKKRPPYKKYPPSSN
Subjt:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYRKRPYKKYPPYKRYPPYKKRPPYKKYPPSSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTCAAGTACTTCCTATTGCTTCTCCTCGCAGTGGTGCTTCTTACCACCACTCAAGCTCTGAAACATCCCTCCGACTCTGCCCATGAAGTGATTCCGGTCAGCAA
CCAAAAGCTTCCGAGCACCACCGCCACCGACACCGAGCCTGCGTCAGAGCATGAGGAATCCAAGTTCTACAGGAAGCGACCCTACAAAAAGTACCCACCCTACAAGAGGT
ACCCACCATACAAGAAACGCCCCCCATACAAGAAGTACCCACCATCCTCCAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGTCAAGTACTTCCTATTGCTTCTCCTCGCAGTGGTGCTTCTTACCACCACTCAAGCTCTGAAACATCCCTCCGACTCTGCCCATGAAGTGATTCCGGTCAGCAA
CCAAAAGCTTCCGAGCACCACCGCCACCGACACCGAGCCTGCGTCAGAGCATGAGGAATCCAAGTTCTACAGGAAGCGACCCTACAAAAAGTACCCACCCTACAAGAGGT
ACCCACCATACAAGAAACGCCCCCCATACAAGAAGTACCCACCATCCTCCAACTAA
Protein sequenceShow/hide protein sequence
MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYRKRPYKKYPPYKRYPPYKKRPPYKKYPPSSN