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Carg10977 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10977
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEmbryo sac development arrest protein
Genome locationCarg_Chr08:6333400..6334596
RNA-Seq ExpressionCarg10977
SyntenyCarg10977
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593829.1 hypothetical protein SDJN03_13305, partial [Cucurbita argyrosperma subsp. sororia]2.3e-6792.76Show/hide
Query:  MSSVHSRTTTTMLPPGASRKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQS
        MSSVHSRTTTTMLPPGASRKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQS
Subjt:  MSSVHSRTTTTMLPPGASRKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQS

Query:  YAEVASILKMEGAHLPGIVNPAQLARWIKI----------YLVASVSEMQVC
        YAEVASILKMEGAHLPGIVNPAQLARWIK+          YLVASVSEMQVC
Subjt:  YAEVASILKMEGAHLPGIVNPAQLARWIKI----------YLVASVSEMQVC

KAG7026157.1 hypothetical protein SDJN02_12656, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-74100Show/hide
Query:  MSSVHSRTTTTMLPPGASRKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQS
        MSSVHSRTTTTMLPPGASRKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQS
Subjt:  MSSVHSRTTTTMLPPGASRKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQS

Query:  YAEVASILKMEGAHLPGIVNPAQLARWIKIYLVASVSEMQVCNGCMNI
        YAEVASILKMEGAHLPGIVNPAQLARWIKIYLVASVSEMQVCNGCMNI
Subjt:  YAEVASILKMEGAHLPGIVNPAQLARWIKIYLVASVSEMQVCNGCMNI

XP_022964143.1 uncharacterized protein LOC111464257 [Cucurbita moschata]2.2e-6298.46Show/hide
Query:  MSSVHSRTTTTMLPPGASRKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQS
        MSSVHSRTTTTMLPPGASRKRKEVE FVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQS
Subjt:  MSSVHSRTTTTMLPPGASRKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQS

Query:  YAEVASILKMEGAHLPGIVNPAQLARWIKI
        YAEVASILKMEGAHLPGIVNPAQLARWIK+
Subjt:  YAEVASILKMEGAHLPGIVNPAQLARWIKI

XP_023514270.1 uncharacterized protein LOC111778588 [Cucurbita pepo subsp. pepo]1.9e-6197.69Show/hide
Query:  MSSVHSRTTTTMLPPGASRKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQS
        MSSVHSRTTTTMLPPGASRKRKEVE FVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGE YEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQS
Subjt:  MSSVHSRTTTTMLPPGASRKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQS

Query:  YAEVASILKMEGAHLPGIVNPAQLARWIKI
        YAEVASILKMEGAHLPGIVNPAQLARWIK+
Subjt:  YAEVASILKMEGAHLPGIVNPAQLARWIKI

XP_023514451.1 uncharacterized protein LOC111778710 [Cucurbita pepo subsp. pepo]1.9e-6197.69Show/hide
Query:  MSSVHSRTTTTMLPPGASRKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQS
        MSSVHSRTTTTMLPPGASRKRKEVE FVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGE YEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQS
Subjt:  MSSVHSRTTTTMLPPGASRKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQS

Query:  YAEVASILKMEGAHLPGIVNPAQLARWIKI
        YAEVASILKMEGAHLPGIVNPAQLARWIK+
Subjt:  YAEVASILKMEGAHLPGIVNPAQLARWIKI

TrEMBL top hitse value%identityAlignment
A0A0A0LI65 Uncharacterized protein2.5e-3572.5Show/hide
Query:  MLPPGAS-RKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQSYAEVASILKM
        M PPG S RKRKEVE  VKPK   ADS+ +NRLLAGYLAHEFL  GTLFGEKYEPA +EAVGM  S+  E K+TK EAAAA S++K N SYAEVA ILKM
Subjt:  MLPPGAS-RKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQSYAEVASILKM

Query:  EGAHLPGIVNPAQLARWIKI
        +GAHLPGIVNP QLA WIK+
Subjt:  EGAHLPGIVNPAQLARWIKI

A0A5A7UAS9 Uncharacterized protein8.5e-3672.5Show/hide
Query:  MLPPGAS-RKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQSYAEVASILKM
        M PPG S RKRKEVE  VKPK   AD++ +NRLLAGYLAHEFLS GTLFGEKYE A++EAVGM   + AE K+TKPEAAAA  ++K N SYAEVASILKM
Subjt:  MLPPGAS-RKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQSYAEVASILKM

Query:  EGAHLPGIVNPAQLARWIKI
        +GAHLPGIVNP QLA WIK+
Subjt:  EGAHLPGIVNPAQLARWIKI

A0A6J1H3W4 uncharacterized protein LOC1114601905.1e-4981.34Show/hide
Query:  SVHSRTTTTMLPPGASRKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPE------AAAAPSVEK
        SVHSRT TTMLPP ASRKRKEVE FVKPKA   DSV SN+LLAGYLAHEFLSKGTLFGEKYEPARSEAVGMT S+P+E K+ KPE      AAAAPSV K
Subjt:  SVHSRTTTTMLPPGASRKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPE------AAAAPSVEK

Query:  ENQSYAEVASILKMEGAHLPGIVNPAQLARWIKI
        E+ SYAEVASILKM+GAHLPGIVNPAQLARWIK+
Subjt:  ENQSYAEVASILKMEGAHLPGIVNPAQLARWIKI

A0A6J1HJY7 uncharacterized protein LOC1114642571.1e-6298.46Show/hide
Query:  MSSVHSRTTTTMLPPGASRKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQS
        MSSVHSRTTTTMLPPGASRKRKEVE FVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQS
Subjt:  MSSVHSRTTTTMLPPGASRKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQS

Query:  YAEVASILKMEGAHLPGIVNPAQLARWIKI
        YAEVASILKMEGAHLPGIVNPAQLARWIK+
Subjt:  YAEVASILKMEGAHLPGIVNPAQLARWIKI

A0A6J1KXG9 uncharacterized protein LOC1114990928.5e-5285.94Show/hide
Query:  SVHSRTTTTMLPPGASRKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQSYA
        S HSRT TTMLPP ASRKRKEVE FVKPKA G DSV SN+LLAGYLAHEFLSKGTLFGEKYEP RSEAVGMT S+P+E K+TKPEAAAAPSV KEN SYA
Subjt:  SVHSRTTTTMLPPGASRKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQSYA

Query:  EVASILKMEGAHLPGIVNPAQLARWIKI
        EVASILKM+GAHLPGIVNPAQLARWIK+
Subjt:  EVASILKMEGAHLPGIVNPAQLARWIKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04000.1 unknown protein1.1e-1646.67Show/hide
Query:  KPKAVGADSVVSNRL-LAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKE--NQSYAEVASILKMEGAHLPGIVNPAQLA
        K     A+ + SN+L LAGYL+HE+L++GTLFGE++  AR++         AE  K KP     P+ E E   + Y EVA++L+ +GA LPGIVNPAQLA
Subjt:  KPKAVGADSVVSNRL-LAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKE--NQSYAEVASILKMEGAHLPGIVNPAQLA

Query:  RWIKI
        R++K+
Subjt:  RWIKI

AT3G23440.1 embryo sac development arrest 65.1e-1740Show/hide
Query:  GASRKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQSYAEVASILKMEGAHL
        GASRKRK+ E+ ++      ++   N LLAGY+AHE+L+ GT+ G K     +E   +    P + ++          V+K  QSY+EVAS+ K +G H+
Subjt:  GASRKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQSYAEVASILKMEGAHL

Query:  PGIVNPAQLARWIKI
        PG+VNP QLA+WI++
Subjt:  PGIVNPAQLARWIKI

AT5G44060.1 unknown protein6.5e-2052.08Show/hide
Query:  ADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQSYAEVASILKMEGAHLPGIVNPAQLARWIKI
        A+ V SN+LLAGYLAHEFL+ GTLFGE + P +++A G   ++  + +K KP     PS  K  + Y EVA+IL+++G HLPGIVNP+QLAR++K+
Subjt:  ADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQSYAEVASILKMEGAHLPGIVNPAQLARWIKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGTGTTCACTCACGCACCACTACCACCATGTTGCCTCCTGGGGCGTCTAGGAAGCGGAAGGAAGTTGAGACGTTTGTGAAGCCGAAGGCTGTGGGAGCCGACTC
CGTTGTGTCGAATCGCCTTCTGGCTGGCTACTTGGCTCACGAGTTTCTCAGTAAAGGCACTTTGTTTGGGGAGAAATACGAGCCGGCTCGAAGTGAAGCCGTTGGAATGA
CTTGCTCGCGGCCAGCCGAGTATAAGAAGACGAAGCCGGAAGCCGCCGCCGCGCCTAGTGTTGAAAAGGAAAATCAGAGCTATGCTGAGGTGGCAAGCATCTTGAAGATG
GAGGGGGCCCACTTGCCTGGGATTGTTAACCCGGCCCAGCTCGCTCGGTGGATTAAAATATATTTGGTTGCTTCGGTTTCTGAAATGCAGGTCTGTAATGGATGCATGAA
TATATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTAGTGTTCACTCACGCACCACTACCACCATGTTGCCTCCTGGGGCGTCTAGGAAGCGGAAGGAAGTTGAGACGTTTGTGAAGCCGAAGGCTGTGGGAGCCGACTC
CGTTGTGTCGAATCGCCTTCTGGCTGGCTACTTGGCTCACGAGTTTCTCAGTAAAGGCACTTTGTTTGGGGAGAAATACGAGCCGGCTCGAAGTGAAGCCGTTGGAATGA
CTTGCTCGCGGCCAGCCGAGTATAAGAAGACGAAGCCGGAAGCCGCCGCCGCGCCTAGTGTTGAAAAGGAAAATCAGAGCTATGCTGAGGTGGCAAGCATCTTGAAGATG
GAGGGGGCCCACTTGCCTGGGATTGTTAACCCGGCCCAGCTCGCTCGGTGGATTAAAATATATTTGGTTGCTTCGGTTTCTGAAATGCAGGTCTGTAATGGATGCATGAA
TATATAGCTTTCAAATATTGCATCGATATTTGCATTAGAAAATGGAGTCACGATGATTGAGGTACGTACGCTGTTAAAATATTGTGCGCCTTACGAATTTATTTAGTTAT
ATGTGGATCGATGAATGATTCCTCTCGTGTTTGTTCTCAATGATTGGTTCGATCGATCATCTTTTATTTAGTCGGCACGGCAGCCATTGCTGTCAAGGTTCGTTCCTCTG
TCGTGCCAATTTAGAATTTGTACCATCCTTCGATTTTCGATGCGATTTTTTCCGTTTCCGTCGATATATTGCTTTGTTTTCTTTGGAAGGAAACCGCAGTTAATCTTGTA
AACATTCTTTGTGGAAGAATGTCGGATGATCAGATACTCGATTCGTCATATGCATTAACAAGTTCTTTCACAAAGACCTTGTTA
Protein sequenceShow/hide protein sequence
MSSVHSRTTTTMLPPGASRKRKEVETFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQSYAEVASILKM
EGAHLPGIVNPAQLARWIKIYLVASVSEMQVCNGCMNI