; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg10993 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10993
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGlutamyl-tRNA(Gln) amidotransferase subunit B
Genome locationCarg_Chr08:6252647..6255157
RNA-Seq ExpressionCarg10993
SyntenyCarg10993
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026142.1 hypothetical protein SDJN02_12641, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-35100Show/hide
Query:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLALEEWRKRKMERARVREMEKNGTLRSPTSKSV
        METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLALEEWRKRKMERARVREMEKNGTLRSPTSKSV
Subjt:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLALEEWRKRKMERARVREMEKNGTLRSPTSKSV

XP_022138362.1 uncharacterized protein LOC111009555 [Momordica charantia]6.1e-1744.3Show/hide
Query:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNL------------------------------------------------
        ME QQ  RLRFSF+NAT+A+CLLNLVAAF +LQGFL AASSRNR SSTNP+L                                                
Subjt:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNL------------------------------------------------

Query:  ---------------------ALEEWRKRKMERARVREMEKNGTLRSPT
                             ALEEWRKRKMERAR+REMEKNGTL SP+
Subjt:  ---------------------ALEEWRKRKMERARVREMEKNGTLRSPT

XP_022964013.1 uncharacterized protein LOC111464164 [Cucurbita moschata]4.2e-2654.9Show/hide
Query:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNL------------------------------------------------
        METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNL                                                
Subjt:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNL------------------------------------------------

Query:  ---------------------ALEEWRKRKMERARVREMEKNGTLRSPTSKSV
                             ALEEWRKRKMERARVREMEKNGTLRSPTSKSV
Subjt:  ---------------------ALEEWRKRKMERARVREMEKNGTLRSPTSKSV

XP_023000555.1 uncharacterized protein LOC111494796 [Cucurbita maxima]4.2e-2654.9Show/hide
Query:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNL------------------------------------------------
        METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNL                                                
Subjt:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNL------------------------------------------------

Query:  ---------------------ALEEWRKRKMERARVREMEKNGTLRSPTSKSV
                             ALEEWRKRKMERARVREMEKNGTLRSPTSKSV
Subjt:  ---------------------ALEEWRKRKMERARVREMEKNGTLRSPTSKSV

XP_038874445.1 uncharacterized protein LOC120067104 [Benincasa hispida]2.3e-1645.58Show/hide
Query:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNL------------------------------------------------
        ME QQS RLRFSFRNAT+A+CLLNLVA FL+LQGFL AASSRNR SSTN NL                                                
Subjt:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNL------------------------------------------------

Query:  ---------------------ALEEWRKRKMERARVREMEKNGTLRS
                             ALEEWRKRKMERAR+REMEKNGTL S
Subjt:  ---------------------ALEEWRKRKMERARVREMEKNGTLRS

TrEMBL top hitse value%identityAlignment
A0A5A7SNT0 Uncharacterized protein5.5e-1643.62Show/hide
Query:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNL------------------------------------------------
        ME QQS RLRFSFRNAT+A+C LNLVAAFL+LQGFL AASSR+R  STN  L                                                
Subjt:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNL------------------------------------------------

Query:  ---------------------ALEEWRKRKMERARVREMEKNGTLRSPT
                             ALEEWRKRKMERAR+REMEKNGTL SP+
Subjt:  ---------------------ALEEWRKRKMERARVREMEKNGTLRSPT

A0A5D3D0K8 Uncharacterized protein1.9e-1644.3Show/hide
Query:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNL------------------------------------------------
        ME QQS RLRFSFRNAT+A+CLLNLVAAFL+LQGFL AASSR+R  STN  L                                                
Subjt:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNL------------------------------------------------

Query:  ---------------------ALEEWRKRKMERARVREMEKNGTLRSPT
                             ALEEWRKRKMERAR+REMEKNGTL SP+
Subjt:  ---------------------ALEEWRKRKMERARVREMEKNGTLRSPT

A0A6J1CAW5 uncharacterized protein LOC1110095552.9e-1744.3Show/hide
Query:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNL------------------------------------------------
        ME QQ  RLRFSF+NAT+A+CLLNLVAAF +LQGFL AASSRNR SSTNP+L                                                
Subjt:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNL------------------------------------------------

Query:  ---------------------ALEEWRKRKMERARVREMEKNGTLRSPT
                             ALEEWRKRKMERAR+REMEKNGTL SP+
Subjt:  ---------------------ALEEWRKRKMERARVREMEKNGTLRSPT

A0A6J1HJK6 uncharacterized protein LOC1114641642.0e-2654.9Show/hide
Query:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNL------------------------------------------------
        METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNL                                                
Subjt:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNL------------------------------------------------

Query:  ---------------------ALEEWRKRKMERARVREMEKNGTLRSPTSKSV
                             ALEEWRKRKMERARVREMEKNGTLRSPTSKSV
Subjt:  ---------------------ALEEWRKRKMERARVREMEKNGTLRSPTSKSV

A0A6J1KIP3 uncharacterized protein LOC1114947962.0e-2654.9Show/hide
Query:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNL------------------------------------------------
        METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNL                                                
Subjt:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNL------------------------------------------------

Query:  ---------------------ALEEWRKRKMERARVREMEKNGTLRSPTSKSV
                             ALEEWRKRKMERARVREMEKNGTLRSPTSKSV
Subjt:  ---------------------ALEEWRKRKMERARVREMEKNGTLRSPTSKSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04555.1 unknown protein2.5e-0527.4Show/hide
Query:  RLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNL-------------------------------------------------------
        R+RFSF+NAT+A+ ++N++    +LQGF  ++SS + SSS+   +                                                       
Subjt:  RLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNL-------------------------------------------------------

Query:  ---------------ALEEWRKRKMERARVREMEKNGTLRSPTSKS
                       ALEEWRKRKMERAR R++EK G + S T  S
Subjt:  ---------------ALEEWRKRKMERARVREMEKNGTLRSPTSKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACCCAACAGTCAGGGAGGTTGAGATTCTCGTTTAGGAATGCGACCGTAGCTGTGTGCTTGTTGAACCTGGTGGCGGCTTTTCTTATGCTTCAGGGTTTCTTGTT
TGCTGCCTCTTCCCGCAATAGATCCTCCTCAACAAACCCTAATTTGGCTTTGGAGGAATGGCGGAAAAGGAAGATGGAAAGAGCAAGAGTGCGAGAAATGGAGAAAAATG
GGACACTGAGATCCCCAACTTCTAAATCTGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGACCCAACAGTCAGGGAGGTTGAGATTCTCGTTTAGGAATGCGACCGTAGCTGTGTGCTTGTTGAACCTGGTGGCGGCTTTTCTTATGCTTCAGGGTTTCTTGTT
TGCTGCCTCTTCCCGCAATAGATCCTCCTCAACAAACCCTAATTTGGCTTTGGAGGAATGGCGGAAAAGGAAGATGGAAAGAGCAAGAGTGCGAGAAATGGAGAAAAATG
GGACACTGAGATCCCCAACTTCTAAATCTGTATGA
Protein sequenceShow/hide protein sequence
METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLALEEWRKRKMERARVREMEKNGTLRSPTSKSV