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Carg10997 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10997
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr08:6227449..6229391
RNA-Seq ExpressionCarg10997
SyntenyCarg10997
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013676.1 hypothetical protein SDJN02_23843, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-0954.29Show/hide
Query:  PPSSLHSFLPPID--VGLPPNSPSLGSSDLTGTPPRVYPLWRTVRKLTHRPMSSSDTICNAQDPPLADIV
        PPS+      P     G  P S   G S LTGTPP  YP+  T R+LTH PMS +DTICN  DPPLADIV
Subjt:  PPSSLHSFLPPID--VGLPPNSPSLGSSDLTGTPPRVYPLWRTVRKLTHRPMSSSDTICNAQDPPLADIV

KAG7016581.1 NAC domain-containing protein 86, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-1255.95Show/hide
Query:  RRPPSSLHSFLPPIDVGLPPNSPSLGSSDLTGTPPRVYPLWRTVRKLTHRPMSSSDTI-CNAQDPPLADIVLSGLSLSRFPQAF
        R P   L  F      G  P S   G+S L GTPPRVYP+  TVRKL HR MS SDTI CNA DPPLADI+L GLSL      F
Subjt:  RRPPSSLHSFLPPIDVGLPPNSPSLGSSDLTGTPPRVYPLWRTVRKLTHRPMSSSDTI-CNAQDPPLADIVLSGLSLSRFPQAF

KAG7020717.1 WD repeat-containing protein DWA2, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-1359.52Show/hide
Query:  LKRRRRPPSSLHSFLPPIDVGLPPNSPSLGSSDLTGTPPRVYPLWRTVRKLTHRPMSSSDTICNAQDPPLADIVLSGLSLSRFP
        L R +RP   L  FL PIDV  PPN P   S+ LTGTP  VYPL   V  L H PMS SDTIC+  +PPLADIVL GLSLS  P
Subjt:  LKRRRRPPSSLHSFLPPIDVGLPPNSPSLGSSDLTGTPPRVYPLWRTVRKLTHRPMSSSDTICNAQDPPLADIVLSGLSLSRFP

KAG7020816.1 hypothetical protein SDJN02_17504, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-1056.58Show/hide
Query:  DVGLPPNSPSLGSSDLTGTPPRVYPLWRTVRKLTHRPMSSSDTICNAQDPPLADIVLSGLSLSRFPQAFKTHLHTL
        +VG PPN P  G S LTGTPPRVYPL  T R+ TH P++ S+T CN  D  LADIVL GL  S FP       HTL
Subjt:  DVGLPPNSPSLGSSDLTGTPPRVYPLWRTVRKLTHRPMSSSDTICNAQDPPLADIVLSGLSLSRFPQAFKTHLHTL

KAG7026138.1 hypothetical protein SDJN02_12637, partial [Cucurbita argyrosperma subsp. argyrosperma]5.3e-83100Show/hide
Query:  MTAATALNGKKRRDDTELLKRRRRPPSSLHSFLPPIDVGLPPNSPSLGSSDLTGTPPRVYPLWRTVRKLTHRPMSSSDTICNAQDPPLADIVLSGLSLSR
        MTAATALNGKKRRDDTELLKRRRRPPSSLHSFLPPIDVGLPPNSPSLGSSDLTGTPPRVYPLWRTVRKLTHRPMSSSDTICNAQDPPLADIVLSGLSLSR
Subjt:  MTAATALNGKKRRDDTELLKRRRRPPSSLHSFLPPIDVGLPPNSPSLGSSDLTGTPPRVYPLWRTVRKLTHRPMSSSDTICNAQDPPLADIVLSGLSLSR

Query:  FPQAFKTHLHTLYKRWCSPPELHLACVSSYVFVPLSFAALSTGAEKGVMNKRIES
        FPQAFKTHLHTLYKRWCSPPELHLACVSSYVFVPLSFAALSTGAEKGVMNKRIES
Subjt:  FPQAFKTHLHTLYKRWCSPPELHLACVSSYVFVPLSFAALSTGAEKGVMNKRIES

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGCGGCGACAGCACTGAACGGGAAAAAGAGGCGCGATGACACTGAGCTGCTGAAACGGAGGAGGAGACCACCGTCCTCGCTGCACTCTTTCCTTCCTCCAATTGA
TGTGGGACTGCCCCCAAATTCACCCTCTTTAGGGTCTAGCGACCTTACTGGCACACCGCCTCGTGTCTACCCCCTTTGGAGAACAGTGAGAAAGCTGACACATCGTCCGA
TGTCTAGCTCTGATACCATTTGTAACGCCCAAGATCCACCGCTAGCCGATATTGTTCTCTCTGGGCTCTCCCTTTCGAGATTCCCTCAAGCCTTTAAAACCCATTTGCAC
ACCCTCTATAAACGGTGGTGTTCTCCTCCCGAGTTGCATCTCGCATGTGTCTCATCATACGTTTTCGTTCCTCTTTCATTCGCGGCTTTGTCTACTGGAGCGGAAAAGGG
TGTAATGAATAAGAGAATTGAATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGGCGGCGACAGCACTGAACGGGAAAAAGAGGCGCGATGACACTGAGCTGCTGAAACGGAGGAGGAGACCACCGTCCTCGCTGCACTCTTTCCTTCCTCCAATTGA
TGTGGGACTGCCCCCAAATTCACCCTCTTTAGGGTCTAGCGACCTTACTGGCACACCGCCTCGTGTCTACCCCCTTTGGAGAACAGTGAGAAAGCTGACACATCGTCCGA
TGTCTAGCTCTGATACCATTTGTAACGCCCAAGATCCACCGCTAGCCGATATTGTTCTCTCTGGGCTCTCCCTTTCGAGATTCCCTCAAGCCTTTAAAACCCATTTGCAC
ACCCTCTATAAACGGTGGTGTTCTCCTCCCGAGTTGCATCTCGCATGTGTCTCATCATACGTTTTCGTTCCTCTTTCATTCGCGGCTTTGTCTACTGGAGCGGAAAAGGG
TGTAATGAATAAGAGAATTGAATCTTGA
Protein sequenceShow/hide protein sequence
MTAATALNGKKRRDDTELLKRRRRPPSSLHSFLPPIDVGLPPNSPSLGSSDLTGTPPRVYPLWRTVRKLTHRPMSSSDTICNAQDPPLADIVLSGLSLSRFPQAFKTHLH
TLYKRWCSPPELHLACVSSYVFVPLSFAALSTGAEKGVMNKRIES