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Carg11004 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11004
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionsmall acidic protein 1
Genome locationCarg_Chr08:6175083..6176418
RNA-Seq ExpressionCarg11004
SyntenyCarg11004
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593800.1 Small acidic protein 2, partial [Cucurbita argyrosperma subsp. sororia]1.3e-4396.12Show/hide
Query:  LCFSSSAQRRSKKNKSETELRNKSWAARSVIVKARSAARGEMRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDS
        +  S SAQRRSKKNKSETELRNKSWAARSVIVKARSAARGEMRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDS
Subjt:  LCFSSSAQRRSKKNKSETELRNKSWAARSVIVKARSAARGEMRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDS

Query:  DIN
        DIN
Subjt:  DIN

KAG7026131.1 Small acidic protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-53100Show/hide
Query:  KRDCEGSIYLSLCFSSSAQRRSKKNKSETELRNKSWAARSVIVKARSAARGEMRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADF
        KRDCEGSIYLSLCFSSSAQRRSKKNKSETELRNKSWAARSVIVKARSAARGEMRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADF
Subjt:  KRDCEGSIYLSLCFSSSAQRRSKKNKSETELRNKSWAARSVIVKARSAARGEMRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADF

Query:  FNSFEDDFDDSDIN
        FNSFEDDFDDSDIN
Subjt:  FNSFEDDFDDSDIN

XP_022964281.1 small acidic protein 1 [Cucurbita moschata]3.1e-24100Show/hide
Query:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

XP_023513491.1 small acidic protein 1 [Cucurbita pepo subsp. pepo]7.0e-2498.39Show/hide
Query:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLAD+DFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

XP_038875245.1 small acidic protein 1 [Benincasa hispida]7.0e-2498.39Show/hide
Query:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRPTPMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

TrEMBL top hitse value%identityAlignment
A0A0A0LNK1 Uncharacterized protein8.3e-2395.16Show/hide
Query:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MR +PMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

A0A5A7SMJ5 Small acidic protein 11.1e-2293.55Show/hide
Query:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MR +PMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD+N
Subjt:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

A0A6J1CAH2 small acidic protein 14.9e-2395.16Show/hide
Query:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRPTPM+FFAEMEEQGSTVAMDVDDVDPLEI  EGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

A0A6J1HIH2 small acidic protein 11.5e-24100Show/hide
Query:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

A0A6J1KE12 small acidic protein 11.5e-24100Show/hide
Query:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

SwissProt top hitse value%identityAlignment
Q1ECS0 Small acidic protein 21.3e-0446.38Show/hide
Query:  MRP-TPMEFFAEMEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSDIN
        MRP    +F  EME  G ++ M    D DD  P+++  E  G+   + K  D+DFFN FEDDFDDSDIN
Subjt:  MRP-TPMEFFAEMEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSDIN

Q9T0H2 Small acidic protein 11.4e-1459.68Show/hide
Query:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRP  ++  +EM++ GS++AMDVDD++ +EIL EG + ++NKLADADFFN F+DDFDD+DIN
Subjt:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

Arabidopsis top hitse value%identityAlignment
AT3G24280.1 small acidic protein 29.1e-0646.38Show/hide
Query:  MRP-TPMEFFAEMEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSDIN
        MRP    +F  EME  G ++ M    D DD  P+++  E  G+   + K  D+DFFN FEDDFDDSDIN
Subjt:  MRP-TPMEFFAEMEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSDIN

AT4G13520.1 small acidic protein 19.7e-1659.68Show/hide
Query:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRP  ++  +EM++ GS++AMDVDD++ +EIL EG + ++NKLADADFFN F+DDFDD+DIN
Subjt:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGCGTGATTGTGAGGGCTCGATATATCTATCCCTTTGCTTCTCCAGTTCGGCACAAAGACGAAGCAAGAAAAATAAGAGCGAAACAGAACTCAGAAATAAAAGCTGGGC
GGCTCGAAGCGTGATTGTGAAGGCTCGATCAGCAGCGAGAGGAGAAATGAGGCCTACACCGATGGAGTTCTTTGCGGAGATGGAAGAACAGGGATCGACAGTAGCGATGG
ACGTGGATGATGTTGATCCACTTGAGATATTAGGCGAGGGCGTGATCTCAGCCGAGAACAAGCTCGCCGATGCCGATTTCTTCAACTCCTTTGAGGACGATTTTGATGAC
TCTGACATCAACTGA
mRNA sequenceShow/hide mRNA sequence
AAGCGTGATTGTGAGGGCTCGATATATCTATCCCTTTGCTTCTCCAGTTCGGCACAAAGACGAAGCAAGAAAAATAAGAGCGAAACAGAACTCAGAAATAAAAGCTGGGC
GGCTCGAAGCGTGATTGTGAAGGCTCGATCAGCAGCGAGAGGAGAAATGAGGCCTACACCGATGGAGTTCTTTGCGGAGATGGAAGAACAGGGATCGACAGTAGCGATGG
ACGTGGATGATGTTGATCCACTTGAGATATTAGGCGAGGGCGTGATCTCAGCCGAGAACAAGCTCGCCGATGCCGATTTCTTCAACTCCTTTGAGGACGATTTTGATGAC
TCTGACATCAACTGAAATTCATTTCCCTGGTTCCATTCGAAACAAGTAGTCAGTTTACTAATCGTATGTTTATTGCTTCTGTTGATGAAACAAGATGATTGATGCTAGTA
TGTCCTACTGCTTTTTAGGGATTTCAGCACTTCTAGTTTCTTGGCGATAAATTGAAAATTGGAGACTGATTGCTTTTGAGTACTTGATTGGTTATGGCATATTTGCTTGC
TTTTCCCTCAACCACAATAATCAACCGTGTAATCTTTGTCATTAGTTACAAGGAAAATTAAGGAGGTGTTTGTATGTAGTAGACAATTCCTGCAACTATGTGCTCCATTC
TGATGTTTAGTAATCTATTTTGGACTTTGAGGAAGTCCATAGGTTAGCCTGAATATCCTTCGAGTATAACTGGCTTGGATAGGTTAGCCTGAATATCCTTCGAGTATAAC
TGGCTTGGAT
Protein sequenceShow/hide protein sequence
KRDCEGSIYLSLCFSSSAQRRSKKNKSETELRNKSWAARSVIVKARSAARGEMRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDD
SDIN