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Carg11011 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11011
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionglycine-rich protein 5-like
Genome locationCarg_Chr08:6142636..6143077
RNA-Seq ExpressionCarg11011
SyntenyCarg11011
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593795.1 S-protein-like 5, partial [Cucurbita argyrosperma subsp. sororia]3.3e-4899.12Show/hide
Query:  MARIHVVVVVVVVFFLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH
        MARIHVVVVVVVVF LLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH
Subjt:  MARIHVVVVVVVVFFLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH

Query:  GGFGGGVGGVGGV
        GGFGGGVGGVGGV
Subjt:  GGFGGGVGGVGGV

KAG7026124.1 hypothetical protein SDJN02_12623, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-53100Show/hide
Query:  MARIHVVVVVVVVFFLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH
        MARIHVVVVVVVVFFLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH
Subjt:  MARIHVVVVVVVVFFLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH

Query:  GGFGGGVGGVGGVGGGVVPFP
        GGFGGGVGGVGGVGGGVVPFP
Subjt:  GGFGGGVGGVGGVGGGVVPFP

XP_022964503.1 glycine-rich protein 5-like [Cucurbita moschata]1.2e-5097.52Show/hide
Query:  MARIHVVVVVVVVFFLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH
        MA+IH VVVVVVVF LLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH
Subjt:  MARIHVVVVVVVVFFLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH

Query:  GGFGGGVGGVGGVGGGVVPFP
        GGFGGGVGGVGGVGGGVVPFP
Subjt:  GGFGGGVGGVGGVGGGVVPFP

XP_023000565.1 glycine-rich protein 5-like [Cucurbita maxima]3.5e-5096.69Show/hide
Query:  MARIHVVVVVVVVFFLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH
        M +IH VVVVVVVF LLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH
Subjt:  MARIHVVVVVVVVFFLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH

Query:  GGFGGGVGGVGGVGGGVVPFP
        GGFGGGVGGVGGVGGGVVPFP
Subjt:  GGFGGGVGGVGGVGGGVVPFP

XP_023515156.1 glycine-rich protein 23-like [Cucurbita pepo subsp. pepo]4.6e-5095.87Show/hide
Query:  MARIHVVVVVVVVFFLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH
        MA+IH VVVVVVVF LLVVHANGRNVPGGGSGDGDGM+D+AVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH
Subjt:  MARIHVVVVVVVVFFLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH

Query:  GGFGGGVGGVGGVGGGVVPFP
        GGFGGGVGGVGGVGGGVVPFP
Subjt:  GGFGGGVGGVGGVGGGVVPFP

TrEMBL top hitse value%identityAlignment
A0A1S3CEA9 glycine-rich cell wall structural protein 1-like9.1e-2868.97Show/hide
Query:  VVVVVVFFLLVVHANGRNVPGGGSGDGD-GMLDLAVAPVAGQPSSNDV-DQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHGGFGG
        +VV+V F   +++ +GR VP G S  G+   L+ A +PVA  P    V DQKNI+GGVGGF GMGGYIGGLFPHLGGVG IGKYGGIGGG GFGHGGFG 
Subjt:  VVVVVVFFLLVVHANGRNVPGGGSGDGD-GMLDLAVAPVAGQPSSNDV-DQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHGGFGG

Query:  GVGGVGGVGGGVVPFP
        GVGGVGGVGGGVVPFP
Subjt:  GVGGVGGVGGGVVPFP

A0A5D3D259 Glycine-rich cell wall structural protein 1-like9.1e-2868.97Show/hide
Query:  VVVVVVFFLLVVHANGRNVPGGGSGDGD-GMLDLAVAPVAGQPSSNDV-DQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHGGFGG
        +VV+V F   +++ +GR VP G S  G+   L+ A +PVA  P    V DQKNI+GGVGGF GMGGYIGGLFPHLGGVG IGKYGGIGGG GFGHGGFG 
Subjt:  VVVVVVFFLLVVHANGRNVPGGGSGDGD-GMLDLAVAPVAGQPSSNDV-DQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHGGFGG

Query:  GVGGVGGVGGGVVPFP
        GVGGVGGVGGGVVPFP
Subjt:  GVGGVGGVGGGVVPFP

A0A6J1CDU6 WW domain-containing protein C660.062.2e-1860.74Show/hide
Query:  MARIHVVVVVVVVFFLLVVHANGRNVPG-GGSGDGDGMLDLAVAPVAGQPSSNDV-DQKN-IYGGVGGFAGMGGYIGGLFPHL--GGVGVIGKYGGIGGG
        M +I+ V VV+  F LLVVHA+GR+VPG   S D D  L+LA  PVA  PSS  V +QK  I+GGVGGFAGMGG++GGLFPHL  GGVG IGK+GGIGGG
Subjt:  MARIHVVVVVVVVFFLLVVHANGRNVPG-GGSGDGDGMLDLAVAPVAGQPSSNDV-DQKN-IYGGVGGFAGMGGYIGGLFPHL--GGVGVIGKYGGIGGG

Query:  IGF---GHGGFGGGVGGVGGVGGGV------VPFP
         G    G GG GG  GG GGVGGGV      +PFP
Subjt:  IGF---GHGGFGGGVGGVGGVGGGV------VPFP

A0A6J1HL05 glycine-rich protein 5-like5.9e-5197.52Show/hide
Query:  MARIHVVVVVVVVFFLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH
        MA+IH VVVVVVVF LLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH
Subjt:  MARIHVVVVVVVVFFLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH

Query:  GGFGGGVGGVGGVGGGVVPFP
        GGFGGGVGGVGGVGGGVVPFP
Subjt:  GGFGGGVGGVGGVGGGVVPFP

A0A6J1KIQ3 glycine-rich protein 5-like1.7e-5096.69Show/hide
Query:  MARIHVVVVVVVVFFLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH
        M +IH VVVVVVVF LLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH
Subjt:  MARIHVVVVVVVVFFLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH

Query:  GGFGGGVGGVGGVGGGVVPFP
        GGFGGGVGGVGGVGGGVVPFP
Subjt:  GGFGGGVGGVGGVGGGVVPFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04660.1 glycine-rich protein2.3e-0746.15Show/hide
Query:  VVVVVFFLLVVHANGRNVPG-GGSGDGDGMLDLAVAPVAGQ-----PSSNDVDQKNIYG--GVGGFAGMGGY--IGGL-FPHLGGVGVIGKYGGIGGGIG
        VV V+  +  V A  R VPG    G   G  D    P+  +     P  +  D+K I G  GVGGFAG+GG   +GGL  P +GG+G IGKYGGIGG  G
Subjt:  VVVVVFFLLVVHANGRNVPG-GGSGDGDGMLDLAVAPVAGQ-----PSSNDVDQKNIYG--GVGGFAGMGGY--IGGL-FPHLGGVGVIGKYGGIGGGIG

Query:  FGH----------GGFGGGVGGVGGVGGGV
         G           GG GGGVGG+GGVGGGV
Subjt:  FGH----------GGFGGGVGGVGGVGGGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGGATTCACGTTGTTGTTGTTGTCGTGGTCGTGTTTTTTTTGCTCGTCGTGCATGCAAATGGACGTAACGTTCCAGGTGGTGGTAGCGGGGATGGGGATGGAAT
GCTAGACCTGGCTGTGGCACCGGTAGCGGGTCAGCCGAGCAGCAACGATGTCGACCAAAAGAATATCTATGGTGGCGTTGGAGGTTTTGCAGGGATGGGTGGCTACATTG
GAGGATTGTTTCCACATCTTGGTGGGGTTGGTGTAATTGGGAAGTACGGCGGAATTGGTGGTGGGATTGGGTTTGGTCACGGTGGCTTTGGAGGCGGAGTTGGCGGCGTT
GGCGGCGTAGGTGGTGGAGTTGTGCCATTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGGATTCACGTTGTTGTTGTTGTCGTGGTCGTGTTTTTTTTGCTCGTCGTGCATGCAAATGGACGTAACGTTCCAGGTGGTGGTAGCGGGGATGGGGATGGAAT
GCTAGACCTGGCTGTGGCACCGGTAGCGGGTCAGCCGAGCAGCAACGATGTCGACCAAAAGAATATCTATGGTGGCGTTGGAGGTTTTGCAGGGATGGGTGGCTACATTG
GAGGATTGTTTCCACATCTTGGTGGGGTTGGTGTAATTGGGAAGTACGGCGGAATTGGTGGTGGGATTGGGTTTGGTCACGGTGGCTTTGGAGGCGGAGTTGGCGGCGTT
GGCGGCGTAGGTGGTGGAGTTGTGCCATTTCCTTGA
Protein sequenceShow/hide protein sequence
MARIHVVVVVVVVFFLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHGGFGGGVGGV
GGVGGGVVPFP