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Carg11061 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11061
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 4-like isoform X2
Genome locationCarg_Chr08:5780786..5781627
RNA-Seq ExpressionCarg11061
SyntenyCarg11061
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010658 - Nodulin-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026075.1 hypothetical protein SDJN02_12573, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-58100Show/hide
Query:  MALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQILLPEIWSTHDMIYSTFNIPPSSQSGRCTTKFRVR
        MALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQILLPEIWSTHDMIYSTFNIPPSSQSGRCTTKFRVR
Subjt:  MALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQILLPEIWSTHDMIYSTFNIPPSSQSGRCTTKFRVR

Query:  LKLLQEGAGGDFVMISAS
        LKLLQEGAGGDFVMISAS
Subjt:  LKLLQEGAGGDFVMISAS

XP_022964107.1 protein NUCLEAR FUSION DEFECTIVE 4-like isoform X1 [Cucurbita moschata]4.1e-2776.92Show/hide
Query:  ALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQIL-------------LPEIWSTHDMIY
        ALVPLIISVV FLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLI FNSTPSSKYGAQ+L             LP IWSTH  ++
Subjt:  ALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQIL-------------LPEIWSTHDMIY

XP_022964108.1 protein NUCLEAR FUSION DEFECTIVE 4-like isoform X2 [Cucurbita moschata]4.1e-2776.92Show/hide
Query:  ALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQIL-------------LPEIWSTHDMIY
        ALVPLIISVV FLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLI FNSTPSSKYGAQ+L             LP IWSTH  ++
Subjt:  ALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQIL-------------LPEIWSTHDMIY

XP_023000025.1 protein NUCLEAR FUSION DEFECTIVE 4-like isoform X1 [Cucurbita maxima]2.4e-2778.02Show/hide
Query:  ALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQIL-------------LPEIWSTHDMIY
        ALVPLIISVVAF PILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLI FNSTPSSKYGAQIL             LP IWSTH  ++
Subjt:  ALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQIL-------------LPEIWSTHDMIY

XP_023000026.1 protein NUCLEAR FUSION DEFECTIVE 4-like isoform X2 [Cucurbita maxima]2.4e-2778.02Show/hide
Query:  ALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQIL-------------LPEIWSTHDMIY
        ALVPLIISVVAF PILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLI FNSTPSSKYGAQIL             LP IWSTH  ++
Subjt:  ALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQIL-------------LPEIWSTHDMIY

TrEMBL top hitse value%identityAlignment
A0A5A7TFE8 Protein NUCLEAR FUSION DEFECTIVE 4-like1.8e-2083.58Show/hide
Query:  ALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQILL
        ALVPLIISVVA LP+LHQP  QPSSADA R+DSL FICLYITAVITGLYLI FNS PS+KYG+QILL
Subjt:  ALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQILL

A0A6J1HGX4 protein NUCLEAR FUSION DEFECTIVE 4-like isoform X12.0e-2776.92Show/hide
Query:  ALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQIL-------------LPEIWSTHDMIY
        ALVPLIISVV FLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLI FNSTPSSKYGAQ+L             LP IWSTH  ++
Subjt:  ALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQIL-------------LPEIWSTHDMIY

A0A6J1HJV4 protein NUCLEAR FUSION DEFECTIVE 4-like isoform X22.0e-2776.92Show/hide
Query:  ALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQIL-------------LPEIWSTHDMIY
        ALVPLIISVV FLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLI FNSTPSSKYGAQ+L             LP IWSTH  ++
Subjt:  ALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQIL-------------LPEIWSTHDMIY

A0A6J1KEQ9 protein NUCLEAR FUSION DEFECTIVE 4-like isoform X21.2e-2778.02Show/hide
Query:  ALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQIL-------------LPEIWSTHDMIY
        ALVPLIISVVAF PILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLI FNSTPSSKYGAQIL             LP IWSTH  ++
Subjt:  ALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQIL-------------LPEIWSTHDMIY

A0A6J1KH74 protein NUCLEAR FUSION DEFECTIVE 4-like isoform X11.2e-2778.02Show/hide
Query:  ALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQIL-------------LPEIWSTHDMIY
        ALVPLIISVVAF PILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLI FNSTPSSKYGAQIL             LP IWSTH  ++
Subjt:  ALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQIL-------------LPEIWSTHDMIY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G19450.1 Major facilitator superfamily protein1.7e-1046.97Show/hide
Query:  ALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQIL
        AL+PLI+S  A +PIL QPP +P   D  R DSL F+ L I A + G+YL++F S  S    A++L
Subjt:  ALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQIL

AT5G45275.1 Major facilitator superfamily protein1.3e-1048.48Show/hide
Query:  ALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQIL
        ALVPL +S  A +PIL QPP +P   D  R DSL F+ L I AV+ G+YL++F S  S    A++L
Subjt:  ALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATTGGTTCCTCTCATAATCTCTGTCGTTGCCTTCCTCCCAATCCTTCATCAGCCACCGGCTCAGCCGTCGTCTGCCGATGCCACCCGCAATGACTCCCTCACTTT
CATCTGCTTATACATCACCGCAGTTATCACAGGCCTGTATCTAATCATCTTCAATTCCACACCTTCCAGCAAGTACGGGGCCCAAATTCTGTTGCCTGAAATTTGGAGTA
CTCACGATATGATCTATTCTACGTTTAACATCCCCCCCTCTTCCCAATCTGGACGATGTACTACTAAGTTCAGAGTGCGCCTAAAATTGCTACAAGAAGGAGCTGGCGGT
GACTTTGTCATGATATCGGCGAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATTGGTTCCTCTCATAATCTCTGTCGTTGCCTTCCTCCCAATCCTTCATCAGCCACCGGCTCAGCCGTCGTCTGCCGATGCCACCCGCAATGACTCCCTCACTTT
CATCTGCTTATACATCACCGCAGTTATCACAGGCCTGTATCTAATCATCTTCAATTCCACACCTTCCAGCAAGTACGGGGCCCAAATTCTGTTGCCTGAAATTTGGAGTA
CTCACGATATGATCTATTCTACGTTTAACATCCCCCCCTCTTCCCAATCTGGACGATGTACTACTAAGTTCAGAGTGCGCCTAAAATTGCTACAAGAAGGAGCTGGCGGT
GACTTTGTCATGATATCGGCGAGCTGA
Protein sequenceShow/hide protein sequence
MALVPLIISVVAFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLIIFNSTPSSKYGAQILLPEIWSTHDMIYSTFNIPPSSQSGRCTTKFRVRLKLLQEGAGG
DFVMISAS