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Carg11078 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11078
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description10 kDa chaperonin 1, chloroplastic-like
Genome locationCarg_Chr08:5660535..5662866
RNA-Seq ExpressionCarg11078
SyntenyCarg11078
Gene Ontology termsGO:0051085 - chaperone cofactor-dependent protein refolding (biological process)
GO:0005759 - mitochondrial matrix (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
GO:0051087 - chaperone binding (molecular function)
InterPro domainsIPR011032 - GroES-like superfamily
IPR020818 - GroES chaperonin family
IPR037124 - GroES chaperonin superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593719.1 10 kDa chaperonin 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.9e-51100Show/hide
Query:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
        MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
Subjt:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK

Query:  KVLFSDISAYE
        KVLFSDISAYE
Subjt:  KVLFSDISAYE

KAG7026058.1 10 kDa chaperonin 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-51100Show/hide
Query:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
        MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
Subjt:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK

Query:  KVLFSDISAYE
        KVLFSDISAYE
Subjt:  KVLFSDISAYE

XP_022958987.1 10 kDa chaperonin 1, chloroplastic-like [Cucurbita moschata]9.1e-4590.99Show/hide
Query:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
        MASMFLTV PFVNKID  T  N+R+QSTRRTSL+V AVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYL GEILSTGADAGELGQGK
Subjt:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK

Query:  KVLFSDISAYE
        KVLFSDISAYE
Subjt:  KVLFSDISAYE

XP_022964390.1 10 kDa chaperonin 1, chloroplastic-like [Cucurbita moschata]2.9e-51100Show/hide
Query:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
        MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
Subjt:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK

Query:  KVLFSDISAYE
        KVLFSDISAYE
Subjt:  KVLFSDISAYE

XP_023513476.1 10 kDa chaperonin 1, chloroplastic-like [Cucurbita pepo subsp. pepo]2.1e-4997.3Show/hide
Query:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
        MASMFLTV PFVNKIDSRTFLNQR+QSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYL GEILSTGADAGELGQGK
Subjt:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK

Query:  KVLFSDISAYE
        KVLFSDISAYE
Subjt:  KVLFSDISAYE

TrEMBL top hitse value%identityAlignment
A0A5D3DLT2 Chloroplast chaperonin1.4e-4387.39Show/hide
Query:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
        MASMFLTV PFVNK ++ TF NQR+ STRR SL+V AV KKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYL GEILSTGADAG+LGQGK
Subjt:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK

Query:  KVLFSDISAYE
        KVLFSDISAYE
Subjt:  KVLFSDISAYE

A0A6J1H3B8 10 kDa chaperonin 1, chloroplastic-like4.4e-4590.99Show/hide
Query:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
        MASMFLTV PFVNKID  T  N+R+QSTRRTSL+V AVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYL GEILSTGADAGELGQGK
Subjt:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK

Query:  KVLFSDISAYE
        KVLFSDISAYE
Subjt:  KVLFSDISAYE

A0A6J1HKN7 10 kDa chaperonin 1, chloroplastic-like1.4e-51100Show/hide
Query:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
        MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
Subjt:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK

Query:  KVLFSDISAYE
        KVLFSDISAYE
Subjt:  KVLFSDISAYE

A0A6J1KWR7 10 kDa chaperonin 1, chloroplastic-like5.7e-4590.99Show/hide
Query:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
        MASMFLTV PFVNKID  T  N+R+QSTRRTSL+V AVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYL GEILSTGADAGELGQGK
Subjt:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK

Query:  KVLFSDISAYE
        KVLFSDISAYE
Subjt:  KVLFSDISAYE

E5GC96 Chloroplast chaperonin1.4e-4387.39Show/hide
Query:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
        MASMFLTV PFVNK ++ TF NQR+ STRR SL+V AV KKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYL GEILSTGADAG+LGQGK
Subjt:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK

Query:  KVLFSDISAYE
        KVLFSDISAYE
Subjt:  KVLFSDISAYE

SwissProt top hitse value%identityAlignment
A5GNB0 10 kDa chaperonin2.1e-0439.73Show/hide
Query:  LEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTG---------ADAGELGQGKKVLFS
        L  + V P GDRV +++ E  EK+AGG+LLP +A   E+   GE++  G           A E+G G KVL+S
Subjt:  LEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTG---------ADAGELGQGKKVLFS

O80504 10 kDa chaperonin 2, chloroplastic2.0e-2655.56Show/hide
Query:  MASMFLTVNP-----FVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAG-
        MAS F+   P     F  K  + +  N  +  +RR  L+++A+S K EP KVVPQ DRVL+RLE+LP KS+GGVLLPK+AVKFERYL+GEI+S G++ G 
Subjt:  MASMFLTVNP-----FVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAG-

Query:  ELGQGKKVLFSDISAYE
        ++G GK+VLFSD+SAYE
Subjt:  ELGQGKKVLFSDISAYE

Q7TTX2 10 kDa chaperonin1.6e-0441.1Show/hide
Query:  LEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTG---------ADAGELGQGKKVLFS
        L  + V P GDRV I++ E  EK+AGG+LLP +A   E+   GE++  G           A E+G G KVL+S
Subjt:  LEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTG---------ADAGELGQGKKVLFS

Q7TUS3 10 kDa chaperonin2.1e-0439.73Show/hide
Query:  LEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTG---------ADAGELGQGKKVLFS
        L  + V P GDRV +++ E  EK+AGG+LLP +A   E+   GE++  G           A E+G G KVL+S
Subjt:  LEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTG---------ADAGELGQGKKVLFS

Q9M1C2 10 kDa chaperonin 1, chloroplastic1.7e-3062.61Show/hide
Query:  MASMFLTV-NPFVN---KIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGEL
        MAS F+TV  PF++   K ++ T   Q +   RR S ++ AVS K EPAKVVPQ DRVL+RLE LPEKS+GGVLLPKSAVKFERYL+GE++S G++ GE+
Subjt:  MASMFLTV-NPFVN---KIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGEL

Query:  GQGKKVLFSDISAYE
          GKKVLFSD+SAYE
Subjt:  GQGKKVLFSDISAYE

Arabidopsis top hitse value%identityAlignment
AT2G44650.1 chloroplast chaperonin 101.4e-2755.56Show/hide
Query:  MASMFLTVNP-----FVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAG-
        MAS F+   P     F  K  + +  N  +  +RR  L+++A+S K EP KVVPQ DRVL+RLE+LP KS+GGVLLPK+AVKFERYL+GEI+S G++ G 
Subjt:  MASMFLTVNP-----FVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAG-

Query:  ELGQGKKVLFSDISAYE
        ++G GK+VLFSD+SAYE
Subjt:  ELGQGKKVLFSDISAYE

AT3G60210.1 GroES-like family protein1.2e-3162.61Show/hide
Query:  MASMFLTV-NPFVN---KIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGEL
        MAS F+TV  PF++   K ++ T   Q +   RR S ++ AVS K EPAKVVPQ DRVL+RLE LPEKS+GGVLLPKSAVKFERYL+GE++S G++ GE+
Subjt:  MASMFLTV-NPFVN---KIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGEL

Query:  GQGKKVLFSDISAYE
          GKKVLFSD+SAYE
Subjt:  GQGKKVLFSDISAYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCAATGTTCTTGACTGTGAACCCCTTTGTAAACAAAATAGATTCACGCACTTTCTTGAATCAGAGAATGCAGAGCACTCGTAGAACTTCCCTTCAAGTCCGCGC
TGTATCCAAGAAATTGGAACCCGCCAAGGTTGTTCCACAAGGGGATAGAGTCCTCATTCGGCTCGAGGAGCTTCCTGAGAAATCAGCAGGAGGAGTTCTATTGCCCAAGT
CAGCCGTTAAATTCGAGCGTTATCTTTCGGGAGAGATCCTCTCTACAGGTGCTGATGCTGGGGAATTGGGGCAAGGAAAGAAGGTTCTTTTCTCAGACATAAGTGCTTAT
GAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCAATGTTCTTGACTGTGAACCCCTTTGTAAACAAAATAGATTCACGCACTTTCTTGAATCAGAGAATGCAGAGCACTCGTAGAACTTCCCTTCAAGTCCGCGC
TGTATCCAAGAAATTGGAACCCGCCAAGGTTGTTCCACAAGGGGATAGAGTCCTCATTCGGCTCGAGGAGCTTCCTGAGAAATCAGCAGGAGGAGTTCTATTGCCCAAGT
CAGCCGTTAAATTCGAGCGTTATCTTTCGGGAGAGATCCTCTCTACAGGTGCTGATGCTGGGGAATTGGGGCAAGGAAAGAAGGTTCTTTTCTCAGACATAAGTGCTTAT
GAG
Protein sequenceShow/hide protein sequence
MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGKKVLFSDISAY
E