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Carg11151 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11151
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionneuronal acetylcholine receptor subunit alpha-2-like
Genome locationCarg_Chr14:4962500..4962925
RNA-Seq ExpressionCarg11151
SyntenyCarg11151
Gene Ontology termsNA
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581289.1 hypothetical protein SDJN03_21291, partial [Cucurbita argyrosperma subsp. sororia]3.9e-77100Show/hide
Query:  MSCTKWDAARRAMKFLRHWKIHTHRRYRHSFPVDFRHVWRFIKRLIHPTPTPLRPYSAERQFSFNDNPIVHLKLHRRPPPSPPCDYEAEEEEEEEGIDSK
        MSCTKWDAARRAMKFLRHWKIHTHRRYRHSFPVDFRHVWRFIKRLIHPTPTPLRPYSAERQFSFNDNPIVHLKLHRRPPPSPPCDYEAEEEEEEEGIDSK
Subjt:  MSCTKWDAARRAMKFLRHWKIHTHRRYRHSFPVDFRHVWRFIKRLIHPTPTPLRPYSAERQFSFNDNPIVHLKLHRRPPPSPPCDYEAEEEEEEEGIDSK

Query:  AEKFIKMFYEEMRLQSQVSYLPLDWFSDADESPSDQYFVLS
        AEKFIKMFYEEMRLQSQVSYLPLDWFSDADESPSDQYFVLS
Subjt:  AEKFIKMFYEEMRLQSQVSYLPLDWFSDADESPSDQYFVLS

XP_011652950.1 uncharacterized protein LOC105435158 [Cucumis sativus]4.3e-3152.47Show/hide
Query:  TKWDAARRAMK-FLRHWKIHTHRRYRHSFPVDFRHVWRFIKRLIHPTPTPLRPYSAERQFSFNDNPIVHLKLHRRPPPS---------------------
        T++   R+A K  LR WK+H+HRR   +FPVDFR + RFIKR++HPTPTPL P+ AERQFSFND PI HLK H R  PS                     
Subjt:  TKWDAARRAMK-FLRHWKIHTHRRYRHSFPVDFRHVWRFIKRLIHPTPTPLRPYSAERQFSFNDNPIVHLKLHRRPPPS---------------------

Query:  --PPCDY----------EAEEEEEEEGIDSKAEKFIKMFYEEMRLQSQVSYLPLDWFSDADE
            C++          E EEEEEE+GID KAEKFIKMFYEEM++QSQVSYL  D FSD +E
Subjt:  --PPCDY----------EAEEEEEEEGIDSKAEKFIKMFYEEMRLQSQVSYLPLDWFSDADE

XP_022934217.1 uncharacterized protein LOC111441455 [Cucurbita moschata]3.3e-7699.29Show/hide
Query:  MSCTKWDAARRAMKFLRHWKIHTHRRYRHSFPVDFRHVWRFIKRLIHPTPTPLRPYSAERQFSFNDNPIVHLKLHRRPPPSPPCDYEAEEEEEEEGIDSK
        MSCTKWDAARRAMKFLRHWKIHTHRRYR SFPVDFRHVWRFIKRLIHPTPTPLRPYSAERQFSFNDNPIVHLKLHRRPPPSPPCDYEAEEEEEEEGIDSK
Subjt:  MSCTKWDAARRAMKFLRHWKIHTHRRYRHSFPVDFRHVWRFIKRLIHPTPTPLRPYSAERQFSFNDNPIVHLKLHRRPPPSPPCDYEAEEEEEEEGIDSK

Query:  AEKFIKMFYEEMRLQSQVSYLPLDWFSDADESPSDQYFVLS
        AEKFIKMFYEEMRLQSQVSYLPLDWFSDADESPSDQYFVLS
Subjt:  AEKFIKMFYEEMRLQSQVSYLPLDWFSDADESPSDQYFVLS

XP_023526161.1 uncharacterized protein LOC111789721 [Cucurbita pepo subsp. pepo]1.7e-7296.45Show/hide
Query:  MSCTKWDAARRAMKFLRHWKIHTHRRYRHSFPVDFRHVWRFIKRLIHPTPTPLRPYSAERQFSFNDNPIVHLKLHRRPPPSPPCDYEAEEEEEEEGIDSK
        MSCTKWDAARRAMKFLR WKIHTHRR R SFPVDF HVWRFIKRLIHPTPTPLRPYSAERQFSFNDNPIVHLKLHR PPPSPPCDYEAEEEEEEEGIDSK
Subjt:  MSCTKWDAARRAMKFLRHWKIHTHRRYRHSFPVDFRHVWRFIKRLIHPTPTPLRPYSAERQFSFNDNPIVHLKLHRRPPPSPPCDYEAEEEEEEEGIDSK

Query:  AEKFIKMFYEEMRLQSQVSYLPLDWFSDADESPSDQYFVLS
        AEKFIKMFYEEMRLQSQVSYLPLDWFSDADESPSDQYFVLS
Subjt:  AEKFIKMFYEEMRLQSQVSYLPLDWFSDADESPSDQYFVLS

XP_038906165.1 uncharacterized protein LOC120092045 [Benincasa hispida]1.4e-2950.56Show/hide
Query:  MSCTKWDAARRAMKFLRHWKIHTHRRYRHSFPVDFRHVWRFIKRLIH----PTPTPLRPYSAERQFSFNDNPIVHLKLHRRPPPSP--------------
        MS TK  AARR  K LR  K HTHRR    FPVDFR + RFIKRL+H    PTP P+ P+  ERQFSFND PI HLK HR PP +               
Subjt:  MSCTKWDAARRAMKFLRHWKIHTHRRYRHSFPVDFRHVWRFIKRLIH----PTPTPLRPYSAERQFSFNDNPIVHLKLHRRPPPSP--------------

Query:  ---------------------------PCDYEAEEEEEEE----GIDSKAEKFIKMFYEEMRLQSQVSYLPLDWFSDADE
                                    C YE EEEEEEE    GID KAEKFIKMFYEEM++QSQVSYL LD F D DE
Subjt:  ---------------------------PCDYEAEEEEEEE----GIDSKAEKFIKMFYEEMRLQSQVSYLPLDWFSDADE

TrEMBL top hitse value%identityAlignment
A0A0A0KYA9 Uncharacterized protein2.1e-3152.47Show/hide
Query:  TKWDAARRAMK-FLRHWKIHTHRRYRHSFPVDFRHVWRFIKRLIHPTPTPLRPYSAERQFSFNDNPIVHLKLHRRPPPS---------------------
        T++   R+A K  LR WK+H+HRR   +FPVDFR + RFIKR++HPTPTPL P+ AERQFSFND PI HLK H R  PS                     
Subjt:  TKWDAARRAMK-FLRHWKIHTHRRYRHSFPVDFRHVWRFIKRLIHPTPTPLRPYSAERQFSFNDNPIVHLKLHRRPPPS---------------------

Query:  --PPCDY----------EAEEEEEEEGIDSKAEKFIKMFYEEMRLQSQVSYLPLDWFSDADE
            C++          E EEEEEE+GID KAEKFIKMFYEEM++QSQVSYL  D FSD +E
Subjt:  --PPCDY----------EAEEEEEEEGIDSKAEKFIKMFYEEMRLQSQVSYLPLDWFSDADE

A0A1S3BZI3 neuronal acetylcholine receptor subunit alpha-2-like1.2e-2351.37Show/hide
Query:  WKIHTHRRYRHSFPVDFRHVWRFIKRLIHPTPTPLRPYSAERQFSFNDNPIVHLKLHRRPPPS-----------------------PPCDYEAEEEEEEE
        WKI      R +FPVDFR + RFIKR++H TPTPL  + AERQFSFND PI     HRRPP +                         C++E EEEEEEE
Subjt:  WKIHTHRRYRHSFPVDFRHVWRFIKRLIHPTPTPLRPYSAERQFSFNDNPIVHLKLHRRPPPS-----------------------PPCDYEAEEEEEEE

Query:  ----------GIDSKAEKFIKMFYEEMRLQSQVSYLPLDWFSDADE
                  GID KAEKFIKMFYEEM++QSQVSYL  D FSD DE
Subjt:  ----------GIDSKAEKFIKMFYEEMRLQSQVSYLPLDWFSDADE

A0A5D2IN63 Uncharacterized protein1.2e-0733.94Show/hide
Query:  AARRAMKFLRHWKIHTHRR--YRHSFPVDFRHVWRFIKRLIHPTPTPL-RPYSAERQFSFNDNPIVHLKLHR-------RPPPSP---------------
        AA+RA + LR + + T +    R    ++ R V +F+K L H +P+P  + Y  ERQ SF++ PI H+K+HR        P  SP               
Subjt:  AARRAMKFLRHWKIHTHRR--YRHSFPVDFRHVWRFIKRLIHPTPTPL-RPYSAERQFSFNDNPIVHLKLHR-------RPPPSP---------------

Query:  ------------PCDYEAEEEE--------------EEEGIDSKAEKFIKMFYEEMRLQSQVSYL
                     C+ + EE+               EEEGIDSKA+KFI  FYE+M+LQ Q+SYL
Subjt:  ------------PCDYEAEEEE--------------EEEGIDSKAEKFIKMFYEEMRLQSQVSYL

A0A5D3E0E5 Neuronal acetylcholine receptor subunit alpha-2-like1.2e-2351.37Show/hide
Query:  WKIHTHRRYRHSFPVDFRHVWRFIKRLIHPTPTPLRPYSAERQFSFNDNPIVHLKLHRRPPPS-----------------------PPCDYEAEEEEEEE
        WKI      R +FPVDFR + RFIKR++H TPTPL  + AERQFSFND PI     HRRPP +                         C++E EEEEEEE
Subjt:  WKIHTHRRYRHSFPVDFRHVWRFIKRLIHPTPTPLRPYSAERQFSFNDNPIVHLKLHRRPPPS-----------------------PPCDYEAEEEEEEE

Query:  ----------GIDSKAEKFIKMFYEEMRLQSQVSYLPLDWFSDADE
                  GID KAEKFIKMFYEEM++QSQVSYL  D FSD DE
Subjt:  ----------GIDSKAEKFIKMFYEEMRLQSQVSYLPLDWFSDADE

A0A6J1F231 uncharacterized protein LOC1114414551.6e-7699.29Show/hide
Query:  MSCTKWDAARRAMKFLRHWKIHTHRRYRHSFPVDFRHVWRFIKRLIHPTPTPLRPYSAERQFSFNDNPIVHLKLHRRPPPSPPCDYEAEEEEEEEGIDSK
        MSCTKWDAARRAMKFLRHWKIHTHRRYR SFPVDFRHVWRFIKRLIHPTPTPLRPYSAERQFSFNDNPIVHLKLHRRPPPSPPCDYEAEEEEEEEGIDSK
Subjt:  MSCTKWDAARRAMKFLRHWKIHTHRRYRHSFPVDFRHVWRFIKRLIHPTPTPLRPYSAERQFSFNDNPIVHLKLHRRPPPSPPCDYEAEEEEEEEGIDSK

Query:  AEKFIKMFYEEMRLQSQVSYLPLDWFSDADESPSDQYFVLS
        AEKFIKMFYEEMRLQSQVSYLPLDWFSDADESPSDQYFVLS
Subjt:  AEKFIKMFYEEMRLQSQVSYLPLDWFSDADESPSDQYFVLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02170.1 unknown protein6.0e-0731.97Show/hide
Query:  WRFIKRLIHPTPTPLRPYSAERQFSFNDNPIVHLKLHRRPPPS-----------PPCDYEAEEE--------------------EEEEGIDSKAEKFIKM
        ++ +K L H      R Y  ERQ SF++ P+ ++K     P S           PP D++ + E                    EEE+G+D +AE+FI  
Subjt:  WRFIKRLIHPTPTPLRPYSAERQFSFNDNPIVHLKLHRRPPPS-----------PPCDYEAEEE--------------------EEEEGIDSKAEKFIKM

Query:  FYEEMRLQSQVSYLPLDWFSDA
        FYE+++LQ QVSYL     +DA
Subjt:  FYEEMRLQSQVSYLPLDWFSDA

AT5G38700.1 unknown protein3.0e-0633.33Show/hide
Query:  ERQFSFNDNPIVHLKLHR------------RPPP---------------------------SPPCDYEA---EEEEEEEGIDSKAEKFIKMFYEEMRLQS
        E+Q SF++ PI ++K+HR            RP                             +  CD  A   +EEEEE+G+D +AE+FI  FYE+M+LQ 
Subjt:  ERQFSFNDNPIVHLKLHR------------RPPP---------------------------SPPCDYEA---EEEEEEEGIDSKAEKFIKMFYEEMRLQS

Query:  QVSYL
        Q+SYL
Subjt:  QVSYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTGCACTAAATGGGATGCTGCTCGCAGAGCAATGAAATTCCTACGCCACTGGAAAATTCACACCCACCGCCGCTACCGTCACTCCTTTCCGGTGGATTTCCGTCA
CGTGTGGCGGTTCATCAAGCGACTCATTCACCCAACCCCAACGCCTCTCCGCCCATATTCTGCAGAGCGTCAATTCTCCTTCAATGACAACCCCATTGTTCACCTGAAAT
TGCATCGCCGTCCGCCGCCGTCGCCGCCGTGTGATTATGAAGCGGAGGAGGAAGAGGAAGAAGAAGGGATTGATTCGAAGGCGGAGAAGTTTATTAAAATGTTTTACGAG
GAAATGAGGTTGCAGAGTCAGGTGTCGTATTTGCCGTTGGATTGGTTTTCTGACGCTGATGAGTCACCGTCGGATCAATATTTTGTTTTATCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTGCACTAAATGGGATGCTGCTCGCAGAGCAATGAAATTCCTACGCCACTGGAAAATTCACACCCACCGCCGCTACCGTCACTCCTTTCCGGTGGATTTCCGTCA
CGTGTGGCGGTTCATCAAGCGACTCATTCACCCAACCCCAACGCCTCTCCGCCCATATTCTGCAGAGCGTCAATTCTCCTTCAATGACAACCCCATTGTTCACCTGAAAT
TGCATCGCCGTCCGCCGCCGTCGCCGCCGTGTGATTATGAAGCGGAGGAGGAAGAGGAAGAAGAAGGGATTGATTCGAAGGCGGAGAAGTTTATTAAAATGTTTTACGAG
GAAATGAGGTTGCAGAGTCAGGTGTCGTATTTGCCGTTGGATTGGTTTTCTGACGCTGATGAGTCACCGTCGGATCAATATTTTGTTTTATCTTAA
Protein sequenceShow/hide protein sequence
MSCTKWDAARRAMKFLRHWKIHTHRRYRHSFPVDFRHVWRFIKRLIHPTPTPLRPYSAERQFSFNDNPIVHLKLHRRPPPSPPCDYEAEEEEEEEGIDSKAEKFIKMFYE
EMRLQSQVSYLPLDWFSDADESPSDQYFVLS