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Carg11171 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11171
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr14:5055470..5060435
RNA-Seq ExpressionCarg11171
SyntenyCarg11171
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018032.1 hypothetical protein SDJN02_19898, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-139100Show/hide
Query:  MDFVTDQLCFNFITSLPPKRDSKGQFETYILDDRVFSENRLSSHTYFTTWTIPKRIVTHLWNLLQAKIIEWSNAPNGSEHTHFIRKANKKKQTTGTERSR
        MDFVTDQLCFNFITSLPPKRDSKGQFETYILDDRVFSENRLSSHTYFTTWTIPKRIVTHLWNLLQAKIIEWSNAPNGSEHTHFIRKANKKKQTTGTERSR
Subjt:  MDFVTDQLCFNFITSLPPKRDSKGQFETYILDDRVFSENRLSSHTYFTTWTIPKRIVTHLWNLLQAKIIEWSNAPNGSEHTHFIRKANKKKQTTGTERSR

Query:  SESGSKGDAMKNTIPHGSSQQMRLYERNIPRPFGRGYELEAGMIDTHHPLSSVDKGKSLGNLKPTRRKNSSHEYGFTPLSAAEILSSSLSEVKQTTTTKV
        SESGSKGDAMKNTIPHGSSQQMRLYERNIPRPFGRGYELEAGMIDTHHPLSSVDKGKSLGNLKPTRRKNSSHEYGFTPLSAAEILSSSLSEVKQTTTTKV
Subjt:  SESGSKGDAMKNTIPHGSSQQMRLYERNIPRPFGRGYELEAGMIDTHHPLSSVDKGKSLGNLKPTRRKNSSHEYGFTPLSAAEILSSSLSEVKQTTTTKV

Query:  NRNKSIGSTIARKPSYIHHSHLSASQDYKSSIHLPIDKFSPSEHLPSSILFS
        NRNKSIGSTIARKPSYIHHSHLSASQDYKSSIHLPIDKFSPSEHLPSSILFS
Subjt:  NRNKSIGSTIARKPSYIHHSHLSASQDYKSSIHLPIDKFSPSEHLPSSILFS
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTCGTGACAGATCAGCTGTGCTTCAACTTCATCACCTCTTTGCCTCCAAAAAGAGACTCAAAAGGACAATTCGAAACTTACATCCTCGACGATCGGGTATTCAG
TGAAAACAGACTTTCCTCTCACACATATTTCACCACATGGACGATCCCCAAGAGGATTGTAACCCATCTCTGGAACCTCCTCCAAGCGAAGATCATTGAATGGAGTAACG
CTCCCAACGGTTCCGAGCATACACATTTCATCAGGAAAGCCAATAAAAAGAAGCAAACCACAGGCACTGAAAGATCAAGGTCTGAATCTGGTTCAAAAGGAGATGCCATG
AAAAATACAATACCCCATGGTAGTAGCCAACAGATGCGCCTTTACGAAAGAAATATTCCTCGACCGTTCGGTCGAGGATATGAGCTAGAGGCAGGAATGATAGATACACA
TCATCCTCTGTCATCTGTTGACAAAGGAAAAAGCTTAGGAAATTTAAAACCGACCAGGCGAAAGAACTCGTCCCATGAGTATGGTTTCACCCCATTGTCTGCTGCTGAGA
TCTTATCTTCCTCCTTGAGTGAAGTAAAGCAGACAACAACTACGAAAGTGAATCGAAATAAGTCAATTGGTTCAACGATTGCTAGAAAACCATCCTATATTCATCATTCT
CACCTTTCAGCCTCTCAGGATTATAAGAGTTCAATTCACCTTCCCATCGACAAATTTTCGCCATCCGAGCATTTGCCTTCCAGCATACTTTTCAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACTTCGTGACAGATCAGCTGTGCTTCAACTTCATCACCTCTTTGCCTCCAAAAAGAGACTCAAAAGGACAATTCGAAACTTACATCCTCGACGATCGGGTATTCAG
TGAAAACAGACTTTCCTCTCACACATATTTCACCACATGGACGATCCCCAAGAGGATTGTAACCCATCTCTGGAACCTCCTCCAAGCGAAGATCATTGAATGGAGTAACG
CTCCCAACGGTTCCGAGCATACACATTTCATCAGGAAAGCCAATAAAAAGAAGCAAACCACAGGCACTGAAAGATCAAGGTCTGAATCTGGTTCAAAAGGAGATGCCATG
AAAAATACAATACCCCATGGTAGTAGCCAACAGATGCGCCTTTACGAAAGAAATATTCCTCGACCGTTCGGTCGAGGATATGAGCTAGAGGCAGGAATGATAGATACACA
TCATCCTCTGTCATCTGTTGACAAAGGAAAAAGCTTAGGAAATTTAAAACCGACCAGGCGAAAGAACTCGTCCCATGAGTATGGTTTCACCCCATTGTCTGCTGCTGAGA
TCTTATCTTCCTCCTTGAGTGAAGTAAAGCAGACAACAACTACGAAAGTGAATCGAAATAAGTCAATTGGTTCAACGATTGCTAGAAAACCATCCTATATTCATCATTCT
CACCTTTCAGCCTCTCAGGATTATAAGAGTTCAATTCACCTTCCCATCGACAAATTTTCGCCATCCGAGCATTTGCCTTCCAGCATACTTTTCAGCTGA
Protein sequenceShow/hide protein sequence
MDFVTDQLCFNFITSLPPKRDSKGQFETYILDDRVFSENRLSSHTYFTTWTIPKRIVTHLWNLLQAKIIEWSNAPNGSEHTHFIRKANKKKQTTGTERSRSESGSKGDAM
KNTIPHGSSQQMRLYERNIPRPFGRGYELEAGMIDTHHPLSSVDKGKSLGNLKPTRRKNSSHEYGFTPLSAAEILSSSLSEVKQTTTTKVNRNKSIGSTIARKPSYIHHS
HLSASQDYKSSIHLPIDKFSPSEHLPSSILFS