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Carg11207 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11207
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein TAPETUM DETERMINANT 1-like
Genome locationCarg_Chr14:5336595..5337037
RNA-Seq ExpressionCarg11207
SyntenyCarg11207
Gene Ontology termsNA
InterPro domainsIPR040361 - Tapetum determinant 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018068.1 hypothetical protein SDJN02_19934, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-65100Show/hide
Query:  MAIFLKFLTPLLFLSLLWTGNCQCESNNIQINQRRTGFQIYGMTQWKVTISNNCICSQSNVKLDCRGFQIFESIDPSILAIFDTECLVNDGRPIFNFNPI
        MAIFLKFLTPLLFLSLLWTGNCQCESNNIQINQRRTGFQIYGMTQWKVTISNNCICSQSNVKLDCRGFQIFESIDPSILAIFDTECLVNDGRPIFNFNPI
Subjt:  MAIFLKFLTPLLFLSLLWTGNCQCESNNIQINQRRTGFQIYGMTQWKVTISNNCICSQSNVKLDCRGFQIFESIDPSILAIFDTECLVNDGRPIFNFNPI

Query:  NYTYARDPKFKFDLISSQVACS
        NYTYARDPKFKFDLISSQVACS
Subjt:  NYTYARDPKFKFDLISSQVACS

KAG7026828.1 Protein TAPETUM DETERMINANT 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-4370.49Show/hide
Query:  MAIFLKFLTPLLFLSLLWTGNCQCESNNIQINQRRTGFQIYGMTQWKVTISNNCICSQSNVKLDCRGFQIFESIDPSILAIFDTECLVNDGRPIFNFNPI
        MA FLK    LLF+SLL+ GNCQC SN+I I+Q+ TGFQI+GMT+W VTISNNC+CSQS VKLDC+GFQ  +SIDPSILA+ DTECLVN+G PIF  NP+
Subjt:  MAIFLKFLTPLLFLSLLWTGNCQCESNNIQINQRRTGFQIYGMTQWKVTISNNCICSQSNVKLDCRGFQIFESIDPSILAIFDTECLVNDGRPIFNFNPI

Query:  NYTYARDPKFKFDLISSQVACS
         +TYA+DPKF F LISSQ+ACS
Subjt:  NYTYARDPKFKFDLISSQVACS

XP_023518832.1 uncharacterized protein LOC111782230 [Cucurbita pepo subsp. pepo]2.0e-4067.21Show/hide
Query:  MAIFLKFLTPLLFLSLLWTGNCQCESNNIQINQRRTGFQIYGMTQWKVTISNNCICSQSNVKLDCRGFQIFESIDPSILAIFDTECLVNDGRPIFNFNPI
        MA F      LLF+SLL  GN QC  N+I I+Q+ TGFQI+GMT+W VTISNNC+CSQS VKLDCRGFQ  +S+DPSILA+ DTECLVN+G PIF  NP+
Subjt:  MAIFLKFLTPLLFLSLLWTGNCQCESNNIQINQRRTGFQIYGMTQWKVTISNNCICSQSNVKLDCRGFQIFESIDPSILAIFDTECLVNDGRPIFNFNPI

Query:  NYTYARDPKFKFDLISSQVACS
         +TYA+DPKF F LISSQ+ACS
Subjt:  NYTYARDPKFKFDLISSQVACS

XP_031742370.1 uncharacterized protein At1g05835-like [Cucumis sativus]1.7e-3966.39Show/hide
Query:  MAIFLKFLTPLLFLSLLWTGNCQCESNNIQINQRRTGFQIYGMTQWKVTISNNCICSQSNVKLDCRGFQIFESIDPSILAIFDTECLVNDGRPIFNFNPI
        M IF K L  LL LSL+ TGNCQC  NNI+I+Q  TGFQI+GMT+WKVTI+NNCICSQS++KLDC+GF    SIDPSILAI D+ECLVN+G+PIFN  PI
Subjt:  MAIFLKFLTPLLFLSLLWTGNCQCESNNIQINQRRTGFQIYGMTQWKVTISNNCICSQSNVKLDCRGFQIFESIDPSILAIFDTECLVNDGRPIFNFNPI

Query:  NYTYARDPKFKFDLISSQVACS
         + YA+ PKF F  +SSQ++CS
Subjt:  NYTYARDPKFKFDLISSQVACS

XP_038881121.1 uncharacterized protein At1g05835-like [Benincasa hispida]1.3e-4472.13Show/hide
Query:  MAIFLKFLTPLLFLSLLWTGNCQCESNNIQINQRRTGFQIYGMTQWKVTISNNCICSQSNVKLDCRGFQIFESIDPSILAIFDTECLVNDGRPIFNFNPI
        MAIF+K +T LL LSL+ TGNCQC  NNI I+QR TGFQI+GMT+WKVTISNNC CSQS VK+DC+GFQ  ESIDPSILA+FDTECLVN+G PIFN NPI
Subjt:  MAIFLKFLTPLLFLSLLWTGNCQCESNNIQINQRRTGFQIYGMTQWKVTISNNCICSQSNVKLDCRGFQIFESIDPSILAIFDTECLVNDGRPIFNFNPI

Query:  NYTYARDPKFKFDLISSQVACS
         ++YA+DP+F F  ISSQ++CS
Subjt:  NYTYARDPKFKFDLISSQVACS

TrEMBL top hitse value%identityAlignment
A0A0A0KLZ6 Uncharacterized protein8.0e-4066.39Show/hide
Query:  MAIFLKFLTPLLFLSLLWTGNCQCESNNIQINQRRTGFQIYGMTQWKVTISNNCICSQSNVKLDCRGFQIFESIDPSILAIFDTECLVNDGRPIFNFNPI
        M IF K L  LL LSL+ TGNCQC  NNI+I+Q  TGFQI+GMT+WKVTI+NNCICSQS++KLDC+GF    SIDPSILAI D+ECLVN+G+PIFN  PI
Subjt:  MAIFLKFLTPLLFLSLLWTGNCQCESNNIQINQRRTGFQIYGMTQWKVTISNNCICSQSNVKLDCRGFQIFESIDPSILAIFDTECLVNDGRPIFNFNPI

Query:  NYTYARDPKFKFDLISSQVACS
         + YA+ PKF F  +SSQ++CS
Subjt:  NYTYARDPKFKFDLISSQVACS

A0A1S3B1L8 protein TAPETUM DETERMINANT 1-like8.8e-3964.75Show/hide
Query:  MAIFLKFLTPLLFLSLLWTGNCQCESNNIQINQRRTGFQIYGMTQWKVTISNNCICSQSNVKLDCRGFQIFESIDPSILAIFDTECLVNDGRPIFNFNPI
        MAI +K L  LL LS + TGNCQC  NNI I+Q+ TGFQI+GMT+W VTI+NNCICSQS++KLDC+GF    SIDPSIL+I D ECLVN+G+PIFN  PI
Subjt:  MAIFLKFLTPLLFLSLLWTGNCQCESNNIQINQRRTGFQIYGMTQWKVTISNNCICSQSNVKLDCRGFQIFESIDPSILAIFDTECLVNDGRPIFNFNPI

Query:  NYTYARDPKFKFDLISSQVACS
         + YA+ PKF F  ISSQ++CS
Subjt:  NYTYARDPKFKFDLISSQVACS

A0A5D3CMA8 Protein TAPETUM DETERMINANT 1-like8.8e-3964.75Show/hide
Query:  MAIFLKFLTPLLFLSLLWTGNCQCESNNIQINQRRTGFQIYGMTQWKVTISNNCICSQSNVKLDCRGFQIFESIDPSILAIFDTECLVNDGRPIFNFNPI
        MAI +K L  LL LS + TGNCQC  NNI I+Q+ TGFQI+GMT+W VTI+NNCICSQS++KLDC+GF    SIDPSIL+I D ECLVN+G+PIFN  PI
Subjt:  MAIFLKFLTPLLFLSLLWTGNCQCESNNIQINQRRTGFQIYGMTQWKVTISNNCICSQSNVKLDCRGFQIFESIDPSILAIFDTECLVNDGRPIFNFNPI

Query:  NYTYARDPKFKFDLISSQVACS
         + YA+ PKF F  ISSQ++CS
Subjt:  NYTYARDPKFKFDLISSQVACS

A0A6J1HGA0 uncharacterized protein At1g05835-like5.4e-3663.11Show/hide
Query:  MAIFLKFLTPLLFLSLLWTGNCQCESNNIQINQRRTGFQIYGMTQWKVTISNNCICSQSNVKLDCRGFQIFESIDPSILAIFDTECLVNDGRPIFNFNPI
        MA   K    LLF+S L   N QC  +NI I Q  TGFQI+GMT+W  T+SNNC+CSQS VKLDCRGFQ  +SIDP ILAI DTECLVN+G PIFN  PI
Subjt:  MAIFLKFLTPLLFLSLLWTGNCQCESNNIQINQRRTGFQIYGMTQWKVTISNNCICSQSNVKLDCRGFQIFESIDPSILAIFDTECLVNDGRPIFNFNPI

Query:  NYTYARDPKFKFDLISSQVACS
         +TYA++P+F F  ISSQ+ACS
Subjt:  NYTYARDPKFKFDLISSQVACS

A0A6J1KP98 protein TAPETUM DETERMINANT 1-like1.8e-3966.39Show/hide
Query:  MAIFLKFLTPLLFLSLLWTGNCQCESNNIQINQRRTGFQIYGMTQWKVTISNNCICSQSNVKLDCRGFQIFESIDPSILAIFDTECLVNDGRPIFNFNPI
        MA F K    LLF+SLL  GNCQC SN+I I Q  +GFQI+GMT+W VTISN C+CSQS VKLDCRGFQ  +SIDPS+LA+ D+ECLVN+G PIF  N I
Subjt:  MAIFLKFLTPLLFLSLLWTGNCQCESNNIQINQRRTGFQIYGMTQWKVTISNNCICSQSNVKLDCRGFQIFESIDPSILAIFDTECLVNDGRPIFNFNPI

Query:  NYTYARDPKFKFDLISSQVACS
         +TYA DPKF F LISSQ+ CS
Subjt:  NYTYARDPKFKFDLISSQVACS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G32090.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein2.2e-1336.13Show/hide
Query:  MAIFLKFLTPLLFLSLLWTGNCQCESNNIQINQRRTGFQIYGMTQWKVTISNNCICSQSNVKLDCRGFQIFESIDPSILAIFDTECLVNDGRPIFNFNPI
        MA  LK    +L LS++  G C C    IQI   RTG +I G  +WKVT+ N C C Q +V L C GF   + + P +L      CL+  G  +      
Subjt:  MAIFLKFLTPLLFLSLLWTGNCQCESNNIQINQRRTGFQIYGMTQWKVTISNNCICSQSNVKLDCRGFQIFESIDPSILAIFDTECLVNDGRPIFNFNPI

Query:  NYTYARDPKFKFDLISSQV
         +TYA  P + F  + S+V
Subjt:  NYTYARDPKFKFDLISSQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATCTTCCTCAAGTTTCTCACACCTCTTCTCTTTCTCTCTCTCCTTTGGACGGGAAATTGTCAATGTGAATCGAACAACATACAAATCAATCAAAGGAGGACTGG
TTTTCAGATCTATGGAATGACACAATGGAAGGTGACAATAAGCAACAACTGTATATGTTCTCAGTCCAACGTAAAATTAGATTGCAGAGGATTTCAAATCTTTGAAAGCA
TCGATCCTTCCATCTTAGCTATTTTCGACACCGAGTGTTTGGTTAACGACGGTCGCCCAATTTTCAATTTCAATCCCATCAACTACACTTATGCACGAGACCCTAAATTC
AAGTTCGACCTGATCTCCTCCCAAGTTGCTTGTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCATCTTCCTCAAGTTTCTCACACCTCTTCTCTTTCTCTCTCTCCTTTGGACGGGAAATTGTCAATGTGAATCGAACAACATACAAATCAATCAAAGGAGGACTGG
TTTTCAGATCTATGGAATGACACAATGGAAGGTGACAATAAGCAACAACTGTATATGTTCTCAGTCCAACGTAAAATTAGATTGCAGAGGATTTCAAATCTTTGAAAGCA
TCGATCCTTCCATCTTAGCTATTTTCGACACCGAGTGTTTGGTTAACGACGGTCGCCCAATTTTCAATTTCAATCCCATCAACTACACTTATGCACGAGACCCTAAATTC
AAGTTCGACCTGATCTCCTCCCAAGTTGCTTGTTCTTAA
Protein sequenceShow/hide protein sequence
MAIFLKFLTPLLFLSLLWTGNCQCESNNIQINQRRTGFQIYGMTQWKVTISNNCICSQSNVKLDCRGFQIFESIDPSILAIFDTECLVNDGRPIFNFNPINYTYARDPKF
KFDLISSQVACS