| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6581564.1 RNA polymerase sigma factor sigD, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] | 6.4e-243 | 98.63 | Show/hide |
Query: MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKMEQS
MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKMEQ
Subjt: MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKMEQS
Query: CGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARES
CGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEK KTRIMETQ++EPTNKQLAIAMGTKLGYIDRVLWRARES
Subjt: CGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARES
Query: RDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLS
RDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVA+IAEANNHLGIKLS
Subjt: RDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLS
Query: RVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEE
RVPTHKEVAKYLKVPVSTVRLVTER+KRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEE
Subjt: RVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEE
Query: IGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
IGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
Subjt: IGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
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| XP_022935445.1 RNA polymerase sigma factor sigD, chloroplastic [Cucurbita moschata] | 4.7e-246 | 100 | Show/hide |
Query: MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKMEQS
MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKMEQS
Subjt: MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKMEQS
Query: CGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARES
CGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARES
Subjt: CGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARES
Query: RDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLS
RDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLS
Subjt: RDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLS
Query: RVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEE
RVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEE
Subjt: RVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEE
Query: IGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
IGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
Subjt: IGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
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| XP_022982740.1 RNA polymerase sigma factor sigD, chloroplastic [Cucurbita maxima] | 2.3e-240 | 97.48 | Show/hide |
Query: MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKMEQS
MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFI+NDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDW CKNLEKMEQS
Subjt: MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKMEQS
Query: CGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARES
CGG GNVAWKKRRRKRRKEVGETAEENWVALS+GPLRPGHLSSKEEAELCLCLKEAAQIEK KTRIMETQ+HEPTNKQLAIAMGTKLGYIDRVLWRARES
Subjt: CGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARES
Query: RDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLS
RDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVA+IAEANNHLGIKLS
Subjt: RDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLS
Query: RVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEE
RVPTHKEVAKYLKVPVSTVRLVTER+KRPISIN+PVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELK+LL+TLSKREAHILTLYFGLNGQIPQSFEE
Subjt: RVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEE
Query: IGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
IGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
Subjt: IGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
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| XP_023528248.1 RNA polymerase sigma factor sigD, chloroplastic [Cucurbita pepo subsp. pepo] | 1.7e-243 | 98.86 | Show/hide |
Query: MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKMEQS
MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDW CKNLEKMEQS
Subjt: MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKMEQS
Query: CGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARES
CGG GNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQ+HEPTNKQLAIAMGTKLGYIDRVLWRARES
Subjt: CGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARES
Query: RDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLS
RDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVA+IAEANNHLGIKLS
Subjt: RDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLS
Query: RVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEE
RVPTHKEVAKYLKVPVSTVRLVTER+KRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEE
Subjt: RVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEE
Query: IGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
IGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
Subjt: IGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
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| XP_038906215.1 RNA polymerase sigma factor sigD, chloroplastic [Benincasa hispida] | 4.5e-212 | 86.96 | Show/hide |
Query: MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKMEQS
MATTSSLCSLP QSPTLPSISLSSLPSLKTHLPQQPHF PFSTKL NFINNDTLT PPP E AAVL VEAAREHVLV+A S+DWSCKNLE+ME S
Subjt: MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKMEQS
Query: CGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARES
CGG G VAWKK+RRKRRKEVG AEENW ALS+GPLRPG+LS KEEAELCLCLKEAAQ+E+ KTRIMETQEHEPTN+QLAIA+GTKLG IDR+L RARES
Subjt: CGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARES
Query: RDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLS
RDRLIRCYSKLVISIAAPYQGKG+SLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQ II+ALDKKSRLVRLPGHMGQMVA+IAEANNHLG+KLS
Subjt: RDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLS
Query: RVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEE
R PTHKEVA+ LKV VSTVRLVTER+KRPISINQPVNDRGCLTLQEIMPGPDNLTPENMV+RKLMKQE+K+LLNTLSKREAHIL+LYFGLNG+IP+SFEE
Subjt: RVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEE
Query: IGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
IGKSLNLSRETIRQ N+ATL+KLK ++ILDYLK+YLV
Subjt: IGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0L9T0 Uncharacterized protein | 6.5e-209 | 86.27 | Show/hide |
Query: MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKMEQS
MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHF PFSTKL PN I+NDTLT PPP E AAVLAVEAA EHVLVEA S+DWS KN+EKME+S
Subjt: MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKMEQS
Query: CGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARES
C G G VAWKK+RRKRRKEVG AEENW+ALS+GPLRPG+LS KEEAELCLCLKEA +E +KTRIMETQEHEPTNKQLAIAMGTK G IDR+L RARES
Subjt: CGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARES
Query: RDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLS
RDRLIRCYSKLVISIAAPYQGKG+SLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQ II+ALDKKSRLVRLPGHMGQMVA+IAE NNHLGIKLS
Subjt: RDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLS
Query: RVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEE
R PT+KEVA+ LKV +ST+RLV ER+KRPISINQPVNDR CLTLQEIMPGPDNLTPENMV+RKLMKQELK+LLNTLSKREA IL+LYFGLNG+IPQSFEE
Subjt: RVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEE
Query: IGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
IGKSLNLSRETIRQTNIATL+KLKK+++LDYLKDYLV
Subjt: IGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
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| A0A1S3CFL7 RNA polymerase sigma factor sigD, chloroplastic | 2.5e-200 | 84.91 | Show/hide |
Query: SPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKMEQSCGGAGNVAWKKRR
SPTLPSISLSSLPSLKTHLPQQPHF PFS+KL PNFI+ DTLT PPP E AAVLAVEAA EHVLVEA S+DWS KN+E+ME+SC G G VAWKK+R
Subjt: SPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKMEQSCGGAGNVAWKKRR
Query: RKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARESRDRLIRCYSKLVI
RKRRKEVG AEENW+ALS+GPLRPG+LS KEEAELCLCLKEA +EK+K+RIMETQEHEPTNKQLAIAMGTK G IDR+L RARESRDRLIRCYSKLVI
Subjt: RKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARESRDRLIRCYSKLVI
Query: SIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLSRVPTHKEVAKYLK
SIAAPYQGKG+SLQDLTQEGNIGLLKGAERFEP+RGHKLSTYAYWWIRQ II+ALDKKSRLVRLPGHMGQMVA+IAE NNHLGIKLSR PT++EVA+ LK
Subjt: SIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLSRVPTHKEVAKYLK
Query: VPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEEIGKSLNLSRETIR
V VSTVRLV ER+KRPISINQPVNDR CLTLQEI+PGPDNLTPENMV+RKLMKQELK+LLNTLSKREAHIL+LYFGLNG+IPQSFEEIGKSLNLSRETIR
Subjt: VPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEEIGKSLNLSRETIR
Query: QTNIATLAKLKKSNILDYLKDYLV
+ NIATL+KLKK+N+LDY+KDYLV
Subjt: QTNIATLAKLKKSNILDYLKDYLV
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| A0A5D3BP27 RNA polymerase sigma factor sigD | 6.1e-207 | 85.35 | Show/hide |
Query: MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKMEQS
MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHF PFS+KL PNFI+ DTLT PPP E AAVLAVEAA EHVLVEA S+DWS KN+E+ME+S
Subjt: MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKMEQS
Query: CGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARES
C G G VAWKK+RRKRRKEVG AEENW+ALS+GPLRPG+LS KEEAELCLCLKEA +EK+K+RIMETQEHEPTNKQLAIAMGTK G IDR+L RARES
Subjt: CGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARES
Query: RDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLS
RDRLIRCYSKLVISIAAPYQGKG+SLQDLTQEGNIGLLKGAERFEP+RGHKLSTYAYWWIRQ II+ALDKKSRLVRLPGHMGQMVA+IAE NNHLGIKLS
Subjt: RDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLS
Query: RVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEE
R PT++EVA+ LKV VSTVRLV ER+KRPISINQPVNDR CLTLQEI+PGPDNLTPENMV+RKLMKQELK+LLNTLSKREAHIL+LYFGLNG+IPQSFEE
Subjt: RVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEE
Query: IGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
IGKSLNLSRETIR+ NIATL+KLKK+N+LDY+KDYLV
Subjt: IGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
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| A0A6J1FAN3 RNA polymerase sigma factor sigD, chloroplastic | 2.3e-246 | 100 | Show/hide |
Query: MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKMEQS
MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKMEQS
Subjt: MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKMEQS
Query: CGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARES
CGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARES
Subjt: CGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARES
Query: RDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLS
RDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLS
Subjt: RDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLS
Query: RVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEE
RVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEE
Subjt: RVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEE
Query: IGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
IGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
Subjt: IGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
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| A0A6J1J3P0 RNA polymerase sigma factor sigD, chloroplastic | 1.1e-240 | 97.48 | Show/hide |
Query: MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKMEQS
MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFI+NDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDW CKNLEKMEQS
Subjt: MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTISPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKMEQS
Query: CGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARES
CGG GNVAWKKRRRKRRKEVGETAEENWVALS+GPLRPGHLSSKEEAELCLCLKEAAQIEK KTRIMETQ+HEPTNKQLAIAMGTKLGYIDRVLWRARES
Subjt: CGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARES
Query: RDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLS
RDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVA+IAEANNHLGIKLS
Subjt: RDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLS
Query: RVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEE
RVPTHKEVAKYLKVPVSTVRLVTER+KRPISIN+PVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELK+LL+TLSKREAHILTLYFGLNGQIPQSFEE
Subjt: RVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEE
Query: IGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
IGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
Subjt: IGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
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| SwissProt top hits | e value | %identity | Alignment |
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| O22056 RNA polymerase sigma factor sigB | 1.8e-46 | 30.92 | Show/hide |
Query: KNLEKMEQSCGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYID
K LEK + K++R +EV ++ ++ + L+ +EE EL +++ ++E+++T + E +PT Q A A G +
Subjt: KNLEKMEQSCGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYID
Query: RVLWRARESRDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEA
+ + +D++I+ +LVISIA YQG G++LQDL QEG GL++GAE+F+ +G K STYA+WWI+Q + ++L +SR++RLP HM + ++ EA
Subjt: RVLWRARESRDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEA
Query: NNHLGIKLSRVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLN
L + + P ++E+A+ + + + V K P S++Q + L E++ P+ +T E+++I++ M+Q+L K+L++L RE ++ FG+
Subjt: NNHLGIKLSRVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLN
Query: GQIPQSFEEIGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
++ +EIG+ + +SRE +RQ + KLK ++L+ YLV
Subjt: GQIPQSFEEIGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
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| P26683 RNA polymerase sigma factor SigA | 3.8e-49 | 33.64 | Show/hide |
Query: AWKKRRRKRRKEVGETAEENWVALSN-GPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARESRDRLIR
A K RRR + K+ T + + L G +R L + EE EL + + ++E+++ R+ E E +P + + A A+ L L R ++D++++
Subjt: AWKKRRRKRRKEVGETAEENWVALSN-GPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARESRDRLIR
Query: CYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLSRVPTHK
+LV+SIA Y +G+S QDL QEG++GL++ AE+F+ +G+K STYA WWIRQ I +A+ +SR +RLP H+ + +++I + L ++ R PT +
Subjt: CYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLSRVPTHK
Query: EVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEEIGKSLN
E+A +++ + +R + + + PIS+ P+ L + + D TPE+ V + L++++L+K+L++LS RE +L L +GL+ ++ EEIG+ N
Subjt: EVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEEIGKSLN
Query: LSRETIRQTNIATLAKLKKSNILDYLKDYL
++RE IRQ L KL+ N LK+Y+
Subjt: LSRETIRQTNIATLAKLKKSNILDYLKDYL
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| P38023 RNA polymerase sigma factor SigA1 | 4.5e-50 | 34.46 | Show/hide |
Query: LSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARESRDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKG
L + EE EL + + +E+I+ ++E + P++ + A A+ + L R L+R R ++D++++ +LV+SIA Y +G+S QDL QEG++GL++
Subjt: LSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARESRDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKG
Query: AERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLSRVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRG
AE+F+ +G+K STYA WWIRQ I +A+ +SR +RLP H+ + +++I + L ++ R PT +E+A +++ + +R + + + PIS+ P+
Subjt: AERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLSRVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRG
Query: CLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEEIGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYL
L + + D TPE+ V + L++++L+ +L+TLS RE +L L +GL+ ++ EEIG+ N++RE IRQ L KL+ N LK+Y+
Subjt: CLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEEIGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYL
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| Q9LD95 RNA polymerase sigma factor sigF, chloroplastic | 6.1e-47 | 34.07 | Show/hide |
Query: KKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARESRDRLIRCYS
+K K++ + G ++ GP L++KEEAEL ++ ++EK+KT++ EPT + A AMG + + R R SR++LI
Subjt: KKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARESRDRLIRCYS
Query: KLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLSRVPTHKEVA
+LV+ IA YQ +G++ QDL QEG++GL+K E+F+P G + +TYAYWWIRQ+I +++ + SR +RLP ++ ++ K++EA + + P+ +E+A
Subjt: KLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLSRVPTHKEVA
Query: KYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEEIGKSLNLSR
++ V + + + P+S+ QP+ T QEI P TP V ++LM+ ++ LLN LS +E I+ L FG++G +S EIG+ LS+
Subjt: KYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEEIGKSLNLSR
Query: ETIRQTNIATLAKLKKS
E +RQ L +LK++
Subjt: ETIRQTNIATLAKLKKS
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| Q9ZSL6 RNA polymerase sigma factor sigD, chloroplastic | 2.2e-81 | 41.69 | Show/hide |
Query: MATT--SSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTI-SPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKM
MATT ++ + SP +P+IS P L+T QP ++ SPFS KL+ + DT V+++ + W ++ ++
Subjt: MATT--SSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTI-SPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKM
Query: EQSCGGAGNVAWKKRRRKRRKEVGETAEENWVALS-NGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWR
++ V +++ + + G AE +++ G R G LS EE +LCL LKE A++E + T + +E+E + LA G K + +L R
Subjt: EQSCGGAGNVAWKKRRRKRRKEVGETAEENWVALS-NGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWR
Query: ARESRDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLG
+E+R+++ RCY +LV+SIA YQGKG++LQDL QEG+IGLL+GAERF+P+RG+KLSTY YWWI+Q I++A+ KSRLV+LPG M ++ AK+AEA+N L
Subjt: ARESRDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLG
Query: IKLSRVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQ
KL R P+ +E+A++L + VS VRL ER++ P+S+++ + G +TLQEI+ GPD PE MV R+ MK E+++LL +L+ RE+ +L LYFGLNG+ P
Subjt: IKLSRVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQ
Query: SFEEIGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDY
SFEEIGKSL LSRE +RQ N L KL+ + ++ LK Y
Subjt: SFEEIGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDY
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 1.3e-47 | 30.92 | Show/hide |
Query: KNLEKMEQSCGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYID
K LEK + K++R +EV ++ ++ + L+ +EE EL +++ ++E+++T + E +PT Q A A G +
Subjt: KNLEKMEQSCGGAGNVAWKKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYID
Query: RVLWRARESRDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEA
+ + +D++I+ +LVISIA YQG G++LQDL QEG GL++GAE+F+ +G K STYA+WWI+Q + ++L +SR++RLP HM + ++ EA
Subjt: RVLWRARESRDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEA
Query: NNHLGIKLSRVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLN
L + + P ++E+A+ + + + V K P S++Q + L E++ P+ +T E+++I++ M+Q+L K+L++L RE ++ FG+
Subjt: NNHLGIKLSRVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLN
Query: GQIPQSFEEIGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
++ +EIG+ + +SRE +RQ + KLK ++L+ YLV
Subjt: GQIPQSFEEIGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYLV
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| AT1G64860.1 sigma factor A | 2.3e-33 | 28.68 | Show/hide |
Query: VLVEAGWLSKDWSCKNLEKMEQSCGGAGNVAWKK-------------RRRKRRKEVGETAEENWVALSNGPLRPGH---------LSSKEEAELCLCLKE
+L++ L K W+ + + G G + KK RR +K+ T + +S+G G+ LS E L +K
Subjt: VLVEAGWLSKDWSCKNLEKMEQSCGGAGNVAWKK-------------RRRKRRKEVGETAEENWVALSNGPLRPGH---------LSSKEEAELCLCLKE
Query: AAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARESRDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTY
+++ K+R+ + EP+++QLA+++ + L +R++L +LV+SIA Y G + DL Q G IGLL+G E+F+ ++G ++STY
Subjt: AAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARESRDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTY
Query: AYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLSRVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLT
YWWIRQ + +AL SR +RLP H+ + + I A L K P+ +A+ L + VR TE + S+ DR +PG + +
Subjt: AYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLSRVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLT
Query: ----------PENMVIRKLMKQELKKLLN-TLSKREAHILTLYFGLNGQIPQSFEEIGKSLNLSRETIRQTNIATLAKLK
P + +K+E+ KL++ TL +RE I+ LY+GL+ + ++E+I K + LSRE +RQ + L KLK
Subjt: ----------PENMVIRKLMKQELKKLLN-TLSKREAHILTLYFGLNGQIPQSFEEIGKSLNLSRETIRQTNIATLAKLK
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| AT2G36990.1 RNApolymerase sigma-subunit F | 4.4e-48 | 34.07 | Show/hide |
Query: KKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARESRDRLIRCYS
+K K++ + G ++ GP L++KEEAEL ++ ++EK+KT++ EPT + A AMG + + R R SR++LI
Subjt: KKRRRKRRKEVGETAEENWVALSNGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARESRDRLIRCYS
Query: KLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLSRVPTHKEVA
+LV+ IA YQ +G++ QDL QEG++GL+K E+F+P G + +TYAYWWIRQ+I +++ + SR +RLP ++ ++ K++EA + + P+ +E+A
Subjt: KLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLGIKLSRVPTHKEVA
Query: KYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEEIGKSLNLSR
++ V + + + P+S+ QP+ T QEI P TP V ++LM+ ++ LLN LS +E I+ L FG++G +S EIG+ LS+
Subjt: KYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEEIGKSLNLSR
Query: ETIRQTNIATLAKLKKS
E +RQ L +LK++
Subjt: ETIRQTNIATLAKLKKS
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| AT3G53920.1 RNApolymerase sigma-subunit C | 1.4e-33 | 31.88 | Show/hide |
Query: SKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARESRDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAE
S+ E E+ +K A +E+I+T++ E + A A G + R L RD L++ LV+ +A Y+G GI+ +DL Q G +G+L+GAE
Subjt: SKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWRARESRDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAE
Query: RFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHL----GIKLSRVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVND
RF+ RG+K STY +WIR+++ + + +R V +P + + + I +A L GIK + +E+AK V +R + K SI++ V D
Subjt: RFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHL----GIKLSRVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVND
Query: RGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEEIGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYL
E P +PE V+R+ ++++ LL L RE ++ L +GL P+S EEIGK L +S+E IR+ +AKL+ + L+ YL
Subjt: RGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQSFEEIGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDYL
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| AT5G13730.1 sigma factor 4 | 1.6e-82 | 41.69 | Show/hide |
Query: MATT--SSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTI-SPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKM
MATT ++ + SP +P+IS P L+T QP ++ SPFS KL+ + DT V+++ + W ++ ++
Subjt: MATT--SSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFTI-SPFSTKLAPNFINNDTLTHPPPSEAAAVLAVEAAREHVLVEAGWLSKDWSCKNLEKM
Query: EQSCGGAGNVAWKKRRRKRRKEVGETAEENWVALS-NGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWR
++ V +++ + + G AE +++ G R G LS EE +LCL LKE A++E + T + +E+E + LA G K + +L R
Subjt: EQSCGGAGNVAWKKRRRKRRKEVGETAEENWVALS-NGPLRPGHLSSKEEAELCLCLKEAAQIEKIKTRIMETQEHEPTNKQLAIAMGTKLGYIDRVLWR
Query: ARESRDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLG
+E+R+++ RCY +LV+SIA YQGKG++LQDL QEG+IGLL+GAERF+P+RG+KLSTY YWWI+Q I++A+ KSRLV+LPG M ++ AK+AEA+N L
Subjt: ARESRDRLIRCYSKLVISIAAPYQGKGISLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQTIIQALDKKSRLVRLPGHMGQMVAKIAEANNHLG
Query: IKLSRVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQ
KL R P+ +E+A++L + VS VRL ER++ P+S+++ + G +TLQEI+ GPD PE MV R+ MK E+++LL +L+ RE+ +L LYFGLNG+ P
Subjt: IKLSRVPTHKEVAKYLKVPVSTVRLVTERNKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVIRKLMKQELKKLLNTLSKREAHILTLYFGLNGQIPQ
Query: SFEEIGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDY
SFEEIGKSL LSRE +RQ N L KL+ + ++ LK Y
Subjt: SFEEIGKSLNLSRETIRQTNIATLAKLKKSNILDYLKDY
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