; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg11218 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11218
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionpolygalacturonase
Genome locationCarg_Chr14:5404110..5407293
RNA-Seq ExpressionCarg11218
SyntenyCarg11218
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0009900 - dehiscence (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581572.1 hypothetical protein SDJN03_21574, partial [Cucurbita argyrosperma subsp. sororia]1.0e-10878.99Show/hide
Query:  MSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKV-------------------------------AMILVPKGRT
        MSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKV                               AMILVPKGRT
Subjt:  MSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKV-------------------------------AMILVPKGRT

Query:  YYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRRYPYDLRKRVRRRLIE
        YYLK ITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPT                  
Subjt:  YYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRRYPYDLRKRVRRRLIE

Query:  NVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH
            AVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH
Subjt:  NVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH

KAG7018079.1 hypothetical protein SDJN02_19945, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-169100Show/hide
Query:  MHQPTHFLIFFMSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKVAMILVPKGRTYYLKPITFSGPCRSPLTLKI
        MHQPTHFLIFFMSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKVAMILVPKGRTYYLKPITFSGPCRSPLTLKI
Subjt:  MHQPTHFLIFFMSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKVAMILVPKGRTYYLKPITFSGPCRSPLTLKI

Query:  DGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRRYPYDLRKRVRRRLIENVHLAVTFYQCINLVVANLK
        DGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRRYPYDLRKRVRRRLIENVHLAVTFYQCINLVVANLK
Subjt:  DGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRRYPYDLRKRVRRRLIENVHLAVTFYQCINLVVANLK

Query:  LENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHFIHSAPHKLEHLGQKGQLFVKISTKISLKACLVSITRKPLTCFRSCPSFVEL
        LENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHFIHSAPHKLEHLGQKGQLFVKISTKISLKACLVSITRKPLTCFRSCPSFVEL
Subjt:  LENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHFIHSAPHKLEHLGQKGQLFVKISTKISLKACLVSITRKPLTCFRSCPSFVEL

XP_022934263.1 polygalacturonase [Cucurbita moschata]3.5e-11277.99Show/hide
Query:  MHQPTHFLIFFMSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKV------------------------------
        MHQPTHFLIFFMSFPLFSLCFGSFHEYPL VSQYHD IYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKV                              
Subjt:  MHQPTHFLIFFMSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKV------------------------------

Query:  -AMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRRYPYD
         AMILVPKGRTYYLKPITFSGPCRSPLTLKIDG+IKASPRMSDYD DRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCR APT       
Subjt:  -AMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRRYPYD

Query:  LRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH
                       AVTFYQCINLVVANLKLENAQQMHLTFQKCTNV+ALNLRVVAPENSPNTDGIH
Subjt:  LRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH

XP_022982564.1 polygalacturonase [Cucurbita maxima]4.0e-10875Show/hide
Query:  MHQPTHFLIFFMSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGS----TTRQDRVSSLSGSPKV--------------------------
        MHQPTHFLIFF+SFPLFSLCFGSFHEYPL VSQYHD IYGHYPKPRWNTGFYGS    TTRQ+RVSSLSGSPK+                          
Subjt:  MHQPTHFLIFFMSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGS----TTRQDRVSSLSGSPKV--------------------------

Query:  -----AMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRR
             AMILVPKGRTYYLKPITFSGPC SPLTLKIDG+IKASPRMSDYD DRRHWLKFEGVDNFVVEGNGIINGNG+KWWQNSCKVNKELPCR APT   
Subjt:  -----AMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRR

Query:  YPYDLRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH
                           AVTFYQCINLVVANLKLENAQQMHLTFQKCTNV+ALNLRVVAPENSPNTDGIH
Subjt:  YPYDLRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH

XP_023521323.1 polygalacturonase-like [Cucurbita pepo subsp. pepo]5.0e-11177.24Show/hide
Query:  MHQPTHFLIFFMSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKV------------------------------
        MHQPTHFLIFFMSFPLFSLCFGSFH YPL VSQYHD IYGHYPKPRWNTGFYGS TRQDRVSSLSGSPK+                              
Subjt:  MHQPTHFLIFFMSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKV------------------------------

Query:  -AMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRRYPYD
         AMILVPKGRTYYLKPITFSGPCRSPLTLKIDG+IKASPRMSDYD DRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCR APT       
Subjt:  -AMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRRYPYD

Query:  LRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH
                       AVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH
Subjt:  LRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH

TrEMBL top hitse value%identityAlignment
A0A1S3CG06 polygalacturonase-like3.3e-8461.96Show/hide
Query:  MHQPTHFLIFFMSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPR-----WNTGFYGSTT---RQDRVSSLSGSPKV----------------------
        MHQ     IFF++F LFSLCFGS+ E P  VSQYHD IY HYP P       NT F+ S T   R+DR SS S S KV                      
Subjt:  MHQPTHFLIFFMSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPR-----WNTGFYGSTT---RQDRVSSLSGSPKV----------------------

Query:  ---------AMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAP
                 A +LVPKGRTYYLKPITFSGPCRSPLTLKI+G+IKAS R+SDY++DRRHWLKFEGVDNFVVEGNGIINGNG+KWWQNSCKVNKELPC+RAP
Subjt:  ---------AMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAP

Query:  TVRRYPYDLRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH
        T                      AVTFYQCINLVV+NL  ++AQQMHLTFQKCTNV+ALNLRVVAP NSPNTDGIH
Subjt:  TVRRYPYDLRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH

A0A6J1DF97 polygalacturonase-like isoform X11.3e-8361.76Show/hide
Query:  MHQPTHFLIFFMSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYP-KPRWNTGFYG-STTRQDRVSSLSGSPKV----------------------------
        MH+P+HFLI F++FP+FSLCFG+ HE PL VSQYHD +YG    +P W+T F+G  TTR+DR SS SGSPKV                            
Subjt:  MHQPTHFLIFFMSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYP-KPRWNTGFYG-STTRQDRVSSLSGSPKV----------------------------

Query:  ---AMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGN--GIINGNGKKWWQNSCKVNKELPCRRAPTVRR
           A++LVPKGRTYYLKPITFSGPCRSPLTLKI+G+IKASPR+SDY ++RRHWLKFEGV NFVVEGN  GIINGNG+KWW +SCKVNK LPCR APT   
Subjt:  ---AMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGN--GIINGNGKKWWQNSCKVNKELPCRRAPTVRR

Query:  YPYDLRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH
                           AVTFYQC NLVVANL  +NAQ+MHL+FQKC NV+ALNLRVVAP NSPNTDGIH
Subjt:  YPYDLRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH

A0A6J1DGH1 polygalacturonase-like isoform X21.2e-7859.56Show/hide
Query:  MHQPTHFLIFFMSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYP-KPRWNTGFYG-STTRQDRVSSLSGSPKV----------------------------
        MH+P+HFLI F++FP+FSLCFG+ HE PL VSQYHD +YG    +P W+T F+G  TTR+DR SS SGSPKV                            
Subjt:  MHQPTHFLIFFMSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYP-KPRWNTGFYG-STTRQDRVSSLSGSPKV----------------------------

Query:  ---AMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGN--GIINGNGKKWWQNSCKVNKELPCRRAPTVRR
           A++LVPKGRTYYLKPITFSGPCRSPLTLKI+G+IKASPR+SDY ++RRHWLKFEGV NFVVEGN  GIINGNG+KWW +SCKVNK            
Subjt:  ---AMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGN--GIINGNGKKWWQNSCKVNKELPCRRAPTVRR

Query:  YPYDLRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH
                          LAVTFYQC NLVVANL  +NAQ+MHL+FQKC NV+ALNLRVVAP NSPNTDGIH
Subjt:  YPYDLRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH

A0A6J1F768 polygalacturonase1.7e-11277.99Show/hide
Query:  MHQPTHFLIFFMSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKV------------------------------
        MHQPTHFLIFFMSFPLFSLCFGSFHEYPL VSQYHD IYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKV                              
Subjt:  MHQPTHFLIFFMSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKV------------------------------

Query:  -AMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRRYPYD
         AMILVPKGRTYYLKPITFSGPCRSPLTLKIDG+IKASPRMSDYD DRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCR APT       
Subjt:  -AMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRRYPYD

Query:  LRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH
                       AVTFYQCINLVVANLKLENAQQMHLTFQKCTNV+ALNLRVVAPENSPNTDGIH
Subjt:  LRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH

A0A6J1J4X9 polygalacturonase1.9e-10875Show/hide
Query:  MHQPTHFLIFFMSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGS----TTRQDRVSSLSGSPKV--------------------------
        MHQPTHFLIFF+SFPLFSLCFGSFHEYPL VSQYHD IYGHYPKPRWNTGFYGS    TTRQ+RVSSLSGSPK+                          
Subjt:  MHQPTHFLIFFMSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGS----TTRQDRVSSLSGSPKV--------------------------

Query:  -----AMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRR
             AMILVPKGRTYYLKPITFSGPC SPLTLKIDG+IKASPRMSDYD DRRHWLKFEGVDNFVVEGNGIINGNG+KWWQNSCKVNKELPCR APT   
Subjt:  -----AMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRR

Query:  YPYDLRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH
                           AVTFYQCINLVVANLKLENAQQMHLTFQKCTNV+ALNLRVVAPENSPNTDGIH
Subjt:  YPYDLRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH

SwissProt top hitse value%identityAlignment
P05117 Polygalacturonase-21.5e-4151.22Show/hide
Query:  LVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRRYPYDLRKR
        +VPK + Y LK ITFSGPCRS +++KI G ++AS ++SDY  DRR W+ F+ V N VV G G INGNG+ WW +SCK+NK LPCR APT           
Subjt:  LVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRRYPYDLRKR

Query:  VRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH
                   A+TF+ C NL V NLK +NAQQ+H+ F+ CTNV A NL + A   SPNTDG+H
Subjt:  VRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH

P35336 Polygalacturonase1.5e-4654.39Show/hide
Query:  SPKVAMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRRY
        S   A++LVPK + Y ++PI+FSGPC+S LT++I G I+AS   SDY  D RHWL F+ V N  VEG G INGNGK WWQNSCK NK LPC+ APT    
Subjt:  SPKVAMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRRY

Query:  PYDLRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH
                          A+TFY+  +++V NLK+ENAQQ+H++F  C NVQA NL V APENSPNTDGIH
Subjt:  PYDLRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH

Q02096 Polygalacturonase8.2e-4046.43Show/hide
Query:  AMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDY-DHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRRYPYD
        ++++VP+ + Y LK ITFSGPC+S L +KI G I+AS   SD+  H+R+ W++FE + N  +EG G  NGNG+ WW +SCK  K LPC+ APT       
Subjt:  AMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDY-DHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRRYPYD

Query:  LRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH
                       A+TF  C NL+V++L ++++Q+MHL+F KC +V A NL V APE+SPNTDGIH
Subjt:  LRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH

Q8RY29 Polygalacturonase ADPG27.7e-3846.2Show/hide
Query:  ILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEG--NGIINGNGKKWWQNSCKVNKELPCRRAPTVRRYPYDL
        +LVPKG TY LK I  +GPC S LT++I G + AS + SDY  D   W+ F+GV+N  V+G   G+++GNG+ WWQNSCK NK  PC +APT        
Subjt:  ILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEG--NGIINGNGKKWWQNSCKVNKELPCRRAPTVRRYPYDL

Query:  RKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHFIHS
                      A+TFY   +L+V NLK+ NAQQ+ ++ +KC+NVQ  N+ V AP +SPNTDGIH  ++
Subjt:  RKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHFIHS

Q9SFB7 Polygalacturonase QRT23.9e-4252.33Show/hide
Query:  SPKVAMILVPKGRTYYLKPITFSGPCRSPLTL-KIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRR
        S  +  I+ PK R Y LK +TFSGPC+S L + KI G I+A    SDY  +RRHW+ FE V+N  VEG G I+GNG  WW  SCK+N +LPC  APT   
Subjt:  SPKVAMILVPKGRTYYLKPITFSGPCRSPLTL-KIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRR

Query:  YPYDLRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH
                           AVTF +C NL V+N++LENAQQMHLTFQ C NV+ALNL V +P +SPNTDGIH
Subjt:  YPYDLRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH

Arabidopsis top hitse value%identityAlignment
AT1G70500.1 Pectin lyase-like superfamily protein2.4e-3138.25Show/hide
Query:  RVSSLSGSPKVAMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHD-RRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCR
        R  +++ S   +++LVP+GR+Y +    F GPC+  L ++IDG I A    S +D    R+WL+F  +   V +GNG+I+G+G KWW  SCK NK  PC 
Subjt:  RVSSLSGSPKVAMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHD-RRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCR

Query:  RAPTVRRYPYDLRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHFIHS
         APT                      A+T Y   N+ V  L + N+QQMHL  Q+ T V+   + V +P +SPNTDGIH   S
Subjt:  RAPTVRRYPYDLRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHFIHS

AT1G80170.1 Pectin lyase-like superfamily protein1.3e-3239.39Show/hide
Query:  ILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDH-DRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRRYPYDLR
        ILVP+  T  L+PI  SGPC++ LTL+I G I A      ++  +RR WL F G+    VEG G +NG G++WW+ SCK N   PCR APT         
Subjt:  ILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDH-DRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRRYPYDLR

Query:  KRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHFIHSAPHKLEH----LGQKGQLFVKISTKISL
                     A+TF++C N+ V NL + ++QQMH+    C  V    L+V+AP  SPNTDGIH   S    +++     G      VK ST+IS+
Subjt:  KRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHFIHSAPHKLEH----LGQKGQLFVKISTKISL

AT2G41850.1 polygalacturonase abscission zone A. thaliana5.4e-3946.2Show/hide
Query:  ILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEG--NGIINGNGKKWWQNSCKVNKELPCRRAPTVRRYPYDL
        +LVPKG TY LK I  +GPC S LT++I G + AS + SDY  D   W+ F+GV+N  V+G   G+++GNG+ WWQNSCK NK  PC +APT        
Subjt:  ILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEG--NGIINGNGKKWWQNSCKVNKELPCRRAPTVRRYPYDL

Query:  RKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHFIHS
                      A+TFY   +L+V NLK+ NAQQ+ ++ +KC+NVQ  N+ V AP +SPNTDGIH  ++
Subjt:  RKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHFIHS

AT3G07970.1 Pectin lyase-like superfamily protein2.8e-4352.33Show/hide
Query:  SPKVAMILVPKGRTYYLKPITFSGPCRSPLTL-KIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRR
        S  +  I+ PK R Y LK +TFSGPC+S L + KI G I+A    SDY  +RRHW+ FE V+N  VEG G I+GNG  WW  SCK+N +LPC  APT   
Subjt:  SPKVAMILVPKGRTYYLKPITFSGPCRSPLTL-KIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRR

Query:  YPYDLRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH
                           AVTF +C NL V+N++LENAQQMHLTFQ C NV+ALNL V +P +SPNTDGIH
Subjt:  YPYDLRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH

AT3G57510.1 Pectin lyase-like superfamily protein7.9e-3844.25Show/hide
Query:  VAMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEG--NGIINGNGKKWWQNSCKVNKELPCRRAPTVRRYP
        V   LVPKG+TY LK   F GPC+S    +I G + AS + SDY  D+ HWL  E V+N  ++G   GIINGNGK WWQNSCK++K  PC +APT     
Subjt:  VAMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEG--NGIINGNGKKWWQNSCKVNKELPCRRAPTVRRYP

Query:  YDLRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHFIHS
                         A+T Y   NL V NL+++NAQQ+ ++ +KC  V+  N+ + AP +SPNTDGIH  ++
Subjt:  YDLRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHFIHS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCAACCAACCCATTTCCTCATCTTTTTCATGTCATTTCCCCTGTTTTCTCTCTGTTTTGGCAGTTTCCATGAGTACCCTCTTTTTGTTTCTCAATATCATGATCT
AATTTATGGTCATTATCCAAAACCCAGATGGAACACGGGTTTTTACGGCTCGACGACGAGGCAGGATCGAGTAAGCTCGCTTTCGGGTTCGCCAAAGGTCGCAATGATTT
TGGTGCCTAAAGGCAGGACATATTATCTTAAGCCAATAACTTTTTCAGGTCCTTGTAGATCTCCTTTAACACTAAAGATCGATGGAATAATCAAAGCTTCTCCAAGAATG
TCGGATTACGACCACGATCGACGACATTGGCTTAAATTCGAAGGTGTCGACAACTTTGTTGTAGAAGGCAATGGTATCATCAATGGAAATGGCAAAAAATGGTGGCAAAA
CTCTTGCAAAGTGAACAAAGAACTTCCTTGCAGGAGAGCACCGACGGTTCGTCGCTATCCTTATGATCTTCGAAAGCGTGTTCGACGTCGTTTAATCGAAAATGTTCATC
TGGCTGTAACTTTCTACCAATGCATCAACTTGGTTGTGGCTAACCTGAAACTAGAAAATGCACAACAAATGCATCTGACATTTCAGAAATGCACCAATGTCCAAGCTTTG
AATCTTCGGGTGGTCGCCCCGGAGAATAGTCCCAACACGGATGGAATTCACTTTATCCACAGTGCTCCTCATAAGTTGGAACACTTGGGTCAGAAAGGACAGTTGTTCGT
GAAGATTTCTACAAAAATATCCCTAAAGGCTTGTCTCGTCTCGATTACGAGGAAGCCTTTGACCTGCTTCCGTAGCTGTCCTTCTTTTGTTGAACTA
mRNA sequenceShow/hide mRNA sequence
ATGCATCAACCAACCCATTTCCTCATCTTTTTCATGTCATTTCCCCTGTTTTCTCTCTGTTTTGGCAGTTTCCATGAGTACCCTCTTTTTGTTTCTCAATATCATGATCT
AATTTATGGTCATTATCCAAAACCCAGATGGAACACGGGTTTTTACGGCTCGACGACGAGGCAGGATCGAGTAAGCTCGCTTTCGGGTTCGCCAAAGGTCGCAATGATTT
TGGTGCCTAAAGGCAGGACATATTATCTTAAGCCAATAACTTTTTCAGGTCCTTGTAGATCTCCTTTAACACTAAAGATCGATGGAATAATCAAAGCTTCTCCAAGAATG
TCGGATTACGACCACGATCGACGACATTGGCTTAAATTCGAAGGTGTCGACAACTTTGTTGTAGAAGGCAATGGTATCATCAATGGAAATGGCAAAAAATGGTGGCAAAA
CTCTTGCAAAGTGAACAAAGAACTTCCTTGCAGGAGAGCACCGACGGTTCGTCGCTATCCTTATGATCTTCGAAAGCGTGTTCGACGTCGTTTAATCGAAAATGTTCATC
TGGCTGTAACTTTCTACCAATGCATCAACTTGGTTGTGGCTAACCTGAAACTAGAAAATGCACAACAAATGCATCTGACATTTCAGAAATGCACCAATGTCCAAGCTTTG
AATCTTCGGGTGGTCGCCCCGGAGAATAGTCCCAACACGGATGGAATTCACTTTATCCACAGTGCTCCTCATAAGTTGGAACACTTGGGTCAGAAAGGACAGTTGTTCGT
GAAGATTTCTACAAAAATATCCCTAAAGGCTTGTCTCGTCTCGATTACGAGGAAGCCTTTGACCTGCTTCCGTAGCTGTCCTTCTTTTGTTGAACTA
Protein sequenceShow/hide protein sequence
MHQPTHFLIFFMSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKVAMILVPKGRTYYLKPITFSGPCRSPLTLKIDGIIKASPRM
SDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTVRRYPYDLRKRVRRRLIENVHLAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQAL
NLRVVAPENSPNTDGIHFIHSAPHKLEHLGQKGQLFVKISTKISLKACLVSITRKPLTCFRSCPSFVEL