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Carg11219 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11219
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCellulose synthase
Genome locationCarg_Chr14:5422817..5424364
RNA-Seq ExpressionCarg11219
SyntenyCarg11219
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581574.1 hypothetical protein SDJN03_21576, partial [Cucurbita argyrosperma subsp. sororia]1.5e-6599.27Show/hide
Query:  MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
        MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
Subjt:  MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE

Query:  GEIEREREMIMVEKSRKKPKKSFKQLFQHCMNGSRKM
        GEIEREREMIMVEKSRKKPKKSFKQLFQHCM GSRKM
Subjt:  GEIEREREMIMVEKSRKKPKKSFKQLFQHCMNGSRKM
KAG7018080.1 hypothetical protein SDJN02_19946 [Cucurbita argyrosperma subsp. argyrosperma]3.0e-66100Show/hide
Query:  MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
        MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
Subjt:  MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE

Query:  GEIEREREMIMVEKSRKKPKKSFKQLFQHCMNGSRKM
        GEIEREREMIMVEKSRKKPKKSFKQLFQHCMNGSRKM
Subjt:  GEIEREREMIMVEKSRKKPKKSFKQLFQHCMNGSRKM
XP_004151057.1 uncharacterized protein LOC101205386 [Cucumis sativus]7.8e-4674.44Show/hide
Query:  MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
        MA+ EEPILSRLDRLD MLR +EEI+G  KS KSSC S+P SG  TSDYHTSSVDLSP+SLEK CRPIN  VKV ELKGSL+ERMD +EDRVLKLC+QVE
Subjt:  MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE

Query:  GEIEREREMIMVEKSRKKPKKSFKQLFQHCMNG
        G++ERE++MIMVEK  +KPK+SFKQL Q CM G
Subjt:  GEIEREREMIMVEKSRKKPKKSFKQLFQHCMNG
XP_022934271.1 uncharacterized protein LOC111441483 [Cucurbita moschata]3.7e-6497.08Show/hide
Query:  MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
        MALGEEPILSRLDRLDYMLRL+EEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
Subjt:  MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE

Query:  GEIEREREMIMVEKSRKKPKKSFKQLFQHCMNGSRKM
        GEIERE+EMIMVEKSRKKPKKSFKQLFQHCM GS KM
Subjt:  GEIEREREMIMVEKSRKKPKKSFKQLFQHCMNGSRKM
XP_023528604.1 uncharacterized protein LOC111791474 [Cucurbita pepo subsp. pepo]4.0e-5889.05Show/hide
Query:  MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
        MALGEEPILSRLDRL ++LR++EEIKG SKS KSSCTSSP SGAHTSDYHTSSVDLSPRSLEK CRP+NDAVKVTELKGSLLER+DKIEDRVLKLCLQVE
Subjt:  MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE

Query:  GEIEREREMIMVEKSRKKPKKSFKQLFQHCMNGSRKM
        GEIEREREMIMVEKSRKKPKKSFKQL QHCM GS K+
Subjt:  GEIEREREMIMVEKSRKKPKKSFKQLFQHCMNGSRKM
TrEMBL top hitse value%identityAlignment
A0A0A0LCD9 Uncharacterized protein3.8e-4674.44Show/hide
Query:  MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
        MA+ EEPILSRLDRLD MLR +EEI+G  KS KSSC S+P SG  TSDYHTSSVDLSP+SLEK CRPIN  VKV ELKGSL+ERMD +EDRVLKLC+QVE
Subjt:  MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE

Query:  GEIEREREMIMVEKSRKKPKKSFKQLFQHCMNG
        G++ERE++MIMVEK  +KPK+SFKQL Q CM G
Subjt:  GEIEREREMIMVEKSRKKPKKSFKQLFQHCMNG
A0A1S3CFF4 uncharacterized protein LOC1035003151.9e-4574.63Show/hide
Query:  MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
        MA+ EEPILSRLDRLD MLR +EEIKG +KS KSSC S+P SG  TSDYHTSSVDLSP+SLEK CRPIN  V+V ELKGSL+ERMD +EDRVLKLC+QVE
Subjt:  MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE

Query:  GEIEREREMIMV-EKSRKKPKKSFKQLFQHCMNG
        GE+ERE++M+MV +K +KKPKKSFKQL Q CM G
Subjt:  GEIEREREMIMV-EKSRKKPKKSFKQLFQHCMNG
A0A5A7U299 Uncharacterized protein1.9e-4574.63Show/hide
Query:  MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
        MA+ EEPILSRLDRLD MLR +EEIKG +KS KSSC S+P SG  TSDYHTSSVDLSP+SLEK CRPIN  V+V ELKGSL+ERMD +EDRVLKLC+QVE
Subjt:  MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE

Query:  GEIEREREMIMV-EKSRKKPKKSFKQLFQHCMNG
        GE+ERE++M+MV +K +KKPKKSFKQL Q CM G
Subjt:  GEIEREREMIMV-EKSRKKPKKSFKQLFQHCMNG
A0A6J1DGX0 uncharacterized protein LOC1110203291.7e-4371.85Show/hide
Query:  MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
        MA+ EEPILSRLDRLD +LR +EEI+G  KS KSSC S+P SG  TSDYHTSSVDLSP+SLEK CRPI++ +K+TE+KGSL++RMD IEDRVLKLCLQ+E
Subjt:  MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE

Query:  GEIEREREMIMV--EKSRKKPKKSFKQLFQHCMNG
        GEIERERE +MV  +  +KKPKKSFKQL Q CM G
Subjt:  GEIEREREMIMV--EKSRKKPKKSFKQLFQHCMNG
A0A6J1F1D1 uncharacterized protein LOC1114414831.8e-6497.08Show/hide
Query:  MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
        MALGEEPILSRLDRLDYMLRL+EEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
Subjt:  MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE

Query:  GEIEREREMIMVEKSRKKPKKSFKQLFQHCMNGSRKM
        GEIERE+EMIMVEKSRKKPKKSFKQLFQHCM GS KM
Subjt:  GEIEREREMIMVEKSRKKPKKSFKQLFQHCMNGSRKM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G07985.1 Expressed protein1.3e-1950Show/hide
Query:  MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDL-SPRSLEK-QCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQ
        MA+ EEPILSRLDR+D+M+R +EE+KG S   +SS  S+P SG        SS+DL SPRS+ K  CR +    + TE KG+LLER++ +E++VLKLC Q
Subjt:  MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDL-SPRSLEK-QCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQ

Query:  VEGEIEREREM-IMVEKSRKKPKK
         E E+E ER+     +K +K PKK
Subjt:  VEGEIEREREM-IMVEKSRKKPKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTTGGCGAGGAACCGATTCTCTCGCGGTTGGACCGGCTGGATTATATGTTGAGGCTGATAGAAGAAATTAAAGGGGACAGCAAGTCAGTAAAGAGCTCGTGTAC
ATCTTCCCCGTTAAGTGGGGCCCACACGAGCGATTATCACACATCGTCCGTTGATCTGTCTCCAAGAAGTCTGGAGAAGCAGTGCCGTCCGATCAACGACGCAGTCAAAG
TCACTGAACTCAAAGGAAGCCTTCTCGAGAGAATGGACAAGATTGAGGATAGAGTCCTGAAGCTTTGTTTGCAAGTAGAGGGAGAGATTGAAAGGGAGAGGGAGATGATA
ATGGTTGAGAAGAGTAGGAAGAAGCCTAAGAAGAGCTTTAAACAACTTTTTCAACACTGTATGAACGGATCGAGAAAGATGTGA
mRNA sequenceShow/hide mRNA sequence
TTTGTTTCCCGGGAAAATGGCACTTGGCGAGGAACCGATTCTCTCGCGGTTGGACCGGCTGGATTATATGTTGAGGCTGATAGAAGAAATTAAAGGGGACAGCAAGTCAG
TAAAGAGCTCGTGTACATCTTCCCCGTTAAGTGGGGCCCACACGAGCGATTATCACACATCGTCCGTTGATCTGTCTCCAAGAAGTCTGGAGAAGCAGTGCCGTCCGATC
AACGACGCAGTCAAAGTCACTGAACTCAAAGGAAGCCTTCTCGAGAGAATGGACAAGATTGAGGATAGAGTCCTGAAGCTTTGTTTGCAAGTAGAGGGAGAGATTGAAAG
GGAGAGGGAGATGATAATGGTTGAGAAGAGTAGGAAGAAGCCTAAGAAGAGCTTTAAACAACTTTTTCAACACTGTATGAACGGATCGAGAAAGATGTGA
Protein sequenceShow/hide protein sequence
MALGEEPILSRLDRLDYMLRLIEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVEGEIEREREMI
MVEKSRKKPKKSFKQLFQHCMNGSRKM