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Carg11226 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11226
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionarabinogalactan peptide 23-like
Genome locationCarg_Chr14:5484319..5485495
RNA-Seq ExpressionCarg11226
SyntenyCarg11226
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044702 - Arabinogalactan protein 23/40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018086.1 hypothetical protein SDJN02_19952, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-45100Show/hide
Query:  MVVEVLEMVDGEEEKEMFPPINRIDSISFPQAAISKVKAFFGDSSRRMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSV
        MVVEVLEMVDGEEEKEMFPPINRIDSISFPQAAISKVKAFFGDSSRRMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSV
Subjt:  MVVEVLEMVDGEEEKEMFPPINRIDSISFPQAAISKVKAFFGDSSRRMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSV

Query:  AAYYLQ
        AAYYLQ
Subjt:  AAYYLQ
KAG7019275.1 Arabinogalactan peptide 23, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-1689.83Show/hide
Query:  MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
        MKKI CA+LFAAATVSAVVAHDEA APAPGP+SGA AGLPAIGS+IGASLLSVAAYYLQ
Subjt:  MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
XP_022983304.1 arabinogalactan peptide 23-like [Cucurbita maxima]3.1e-1898.31Show/hide
Query:  MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
        MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGS IGASLLSVAAYYLQ
Subjt:  MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
XP_022998512.1 arabinogalactan peptide 23-like [Cucurbita maxima]2.5e-1586.44Show/hide
Query:  MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
        M KI CA+LFAAATVSAVVAHDEA APAPGP+SGA  GLPAIGS+IGASLLSVAAYYLQ
Subjt:  MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
XP_038905644.1 arabinogalactan protein 23-like [Benincasa hispida]1.2e-1796.61Show/hide
Query:  MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
        MKKIACAVLFAAATVSA VAHDEALAPAPGPSSGAA GLPAIGSVIGASLLSVAAYYLQ
Subjt:  MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
TrEMBL top hitse value%identityAlignment
A0A0A0L9U8 Uncharacterized protein2.2e-1486.21Show/hide
Query:  MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYL
        MKKIACAVLFAAATV+AVVA DEALAPAPGPSSGA  G+PAIGS++GASLLS AAYYL
Subjt:  MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYL
A0A5A7U280 Arabinogalactan peptide 231.0e-1486.21Show/hide
Query:  MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYL
        MKKIACA+LFAAATVSA VA D+ALAPAPGPSSGAA GLPAIGS++GASLLS AAYYL
Subjt:  MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYL
A0A6J1HQG2 arabinogalactan peptide 23-like3.2e-1381.36Show/hide
Query:  MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
        MKKI CAVLFAAATV+A VA +EA APAPGP+S A  GLPAIGS+IGASLLSVAAYYLQ
Subjt:  MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
A0A6J1J6Y9 arabinogalactan peptide 23-like1.5e-1898.31Show/hide
Query:  MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
        MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGS IGASLLSVAAYYLQ
Subjt:  MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
A0A6J1K873 arabinogalactan peptide 23-like1.2e-1586.44Show/hide
Query:  MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
        M KI CA+LFAAATVSAVVAHDEA APAPGP+SGA  GLPAIGS+IGASLLSVAAYYLQ
Subjt:  MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
SwissProt top hitse value%identityAlignment
Q8S2W4 Arabinogalactan protein 232.2e-1165.52Show/hide
Query:  MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYL
        MKKIAC VLFAAA+++AV+A +E  APAPGP+S A+A LPA+GS++GASL+S+ +YYL
Subjt:  MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYL
Arabidopsis top hitse value%identityAlignment
AT2G41905.1 BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1)2.8e-0962.71Show/hide
Query:  MKKIACAVLFAAATVSAVVAHDEALAPAPGP-SSGAAAGLPAIGSVIGASLLSVAAYYL
        MKKIAC V+FAAA+++AV+A  E  APAPGP +SGA+  +PA+GS++GASL+S+ AYYL
Subjt:  MKKIACAVLFAAATVSAVVAHDEALAPAPGP-SSGAAAGLPAIGSVIGASLLSVAAYYL
AT3G57690.1 arabinogalactan protein 231.6e-1265.52Show/hide
Query:  MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYL
        MKKIAC VLFAAA+++AV+A +E  APAPGP+S A+A LPA+GS++GASL+S+ +YYL
Subjt:  MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGTTGAGGTGTTGGAGATGGTGGATGGGGAGGAGGAAAAAGAGATGTTTCCACCTATAAATCGCATCGATTCCATCTCATTTCCTCAGGCAGCAATTTCCAAAGT
GAAGGCGTTTTTCGGTGATTCCTCTCGTCGAATGAAGAAGATCGCCTGCGCCGTCCTCTTCGCTGCCGCAACCGTCAGCGCCGTCGTGGCTCACGACGAGGCGTTGGCTC
CAGCACCTGGACCAAGCAGCGGTGCCGCTGCCGGCCTTCCAGCAATCGGCTCTGTCATTGGCGCTTCGTTGCTCTCTGTCGCGGCCTACTACCTGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGTTGAGGTGTTGGAGATGGTGGATGGGGAGGAGGAAAAAGAGATGTTTCCACCTATAAATCGCATCGATTCCATCTCATTTCCTCAGGCAGCAATTTCCAAAGT
GAAGGCGTTTTTCGGTGATTCCTCTCGTCGAATGAAGAAGATCGCCTGCGCCGTCCTCTTCGCTGCCGCAACCGTCAGCGCCGTCGTGGCTCACGACGAGGCGTTGGCTC
CAGCACCTGGACCAAGCAGCGGTGCCGCTGCCGGCCTTCCAGCAATCGGCTCTGTCATTGGCGCTTCGTTGCTCTCTGTCGCGGCCTACTACCTGCAATGA
Protein sequenceShow/hide protein sequence
MVVEVLEMVDGEEEKEMFPPINRIDSISFPQAAISKVKAFFGDSSRRMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ