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Carg11249 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11249
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane 9 superfamily member
Genome locationCarg_Chr14:5652734..5653021
RNA-Seq ExpressionCarg11249
SyntenyCarg11249
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0012505 - endomembrane system (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0098588 - bounding membrane of organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581607.1 hypothetical protein SDJN03_21609, partial [Cucurbita argyrosperma subsp. sororia]3.0e-3698.91Show/hide
Query:  MISILEFDVAGIFLKIAMFVFVQVLVYLILSKSSNLFSNDKKLRSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSSVRRERSDDS
        MISILE+DVAGIFLKIAMFVFVQVLVYLILSKSSNLFSNDKKLRSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSSVRRERSDDS
Subjt:  MISILEFDVAGIFLKIAMFVFVQVLVYLILSKSSNLFSNDKKLRSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSSVRRERSDDS

KAG6606858.1 hypothetical protein SDJN03_00200, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2471.58Show/hide
Query:  MISILEFDVAGIFLKIAMFVFVQVLVYLILSKSSNLFSNDKKLRSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSSVRRERSDDSGRF
        M+ ILE D    F+KIAMF+ VQ+LVY ILS+SS+LFS D+KL+SLSFKPARSVSIRR LAALSD+P GGELSPSS V TPS + RE SDD GRF
Subjt:  MISILEFDVAGIFLKIAMFVFVQVLVYLILSKSSNLFSNDKKLRSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSSVRRERSDDSGRF

KAG7018107.1 hypothetical protein SDJN02_19975, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-38100Show/hide
Query:  MISILEFDVAGIFLKIAMFVFVQVLVYLILSKSSNLFSNDKKLRSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSSVRRERSDDSGRF
        MISILEFDVAGIFLKIAMFVFVQVLVYLILSKSSNLFSNDKKLRSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSSVRRERSDDSGRF
Subjt:  MISILEFDVAGIFLKIAMFVFVQVLVYLILSKSSNLFSNDKKLRSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSSVRRERSDDSGRF

XP_011651805.2 uncharacterized protein LOC105434941 [Cucumis sativus]1.9e-2776.6Show/hide
Query:  MISILEFDVAGIFLKIAMFVFVQVLVYLILSKSSNLFSNDKKLRSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSSVRRERSDDSGR
        M  I + D   +F++IAMFVF+Q+LVYLILSKSSNLFSND+K+RSLSFKPARSVSIRR LAALSDLPPGGELSPS+ V TPSS RR+RSDD GR
Subjt:  MISILEFDVAGIFLKIAMFVFVQVLVYLILSKSSNLFSNDKKLRSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSSVRRERSDDSGR

XP_038905322.1 uncharacterized protein LOC120091388 [Benincasa hispida]8.6e-2877.89Show/hide
Query:  MISILEFDVAGIFLKIAMFVFVQVLVYLILSKSSNLFSNDKKLRSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSSVRRERSDDSGRF
        M  ILE D   +F+KIAMF FVQ+LVYLILSKSSNLFSND+KLRSLSFKPARSVSIRR LAALSDLPPGGE+SP+  V TPSS RR+ SDD GRF
Subjt:  MISILEFDVAGIFLKIAMFVFVQVLVYLILSKSSNLFSNDKKLRSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSSVRRERSDDSGRF

TrEMBL top hitse value%identityAlignment
A0A1S3CFW1 uncharacterized protein LOC1035002814.1e-2376.92Show/hide
Query:  MISILEFDVAGIFLKIAMFVFVQVLVYLILSKSSNLFSNDKKLRSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSSVRRERSDD
        M  I E D   +F++IAMFVFVQ+LVYLILSKSSNLFSND+KLRSLSFKPARSVSIRR LAALSDLPPGGELS       PSSVRR RSDD
Subjt:  MISILEFDVAGIFLKIAMFVFVQVLVYLILSKSSNLFSNDKKLRSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSSVRRERSDD

A0A444DLD0 Transmembrane 9 superfamily member4.1e-1561.9Show/hide
Query:  VAGIFLKIAMFVFVQVLVYLILSKSSNLFSNDKKLRSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSSVRRERSDDS
        V+ + +K+ +F  VQ LVYLIL+KSSN+FS ++KLRSLSF+PARSVS+RRLLA LSD+PPGGE SPSSS        R  +DDS
Subjt:  VAGIFLKIAMFVFVQVLVYLILSKSSNLFSNDKKLRSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSSVRRERSDDS

A0A5A7UC63 Uncharacterized protein4.1e-2376.92Show/hide
Query:  MISILEFDVAGIFLKIAMFVFVQVLVYLILSKSSNLFSNDKKLRSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSSVRRERSDD
        M  I E D   +F++IAMFVFVQ+LVYLILSKSSNLFSND+KLRSLSFKPARSVSIRR LAALSDLPPGGELS       PSSVRR RSDD
Subjt:  MISILEFDVAGIFLKIAMFVFVQVLVYLILSKSSNLFSNDKKLRSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSSVRRERSDD

A0A6J0PQA3 uncharacterized protein LOC1095065094.1e-1569.62Show/hide
Query:  IFLKIAMFVFVQVLVYLILSKSSNLFSNDKKLRSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSSVRRERSD
        + LK+AMFV VQ LVYLILSKSSN+FS   K RSLSF+  RSVSIRR+LAALSDLPPGGE SPSSSV   SS   +  D
Subjt:  IFLKIAMFVFVQVLVYLILSKSSNLFSNDKKLRSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSSVRRERSD

M0RJ50 Uncharacterized protein4.1e-1561.9Show/hide
Query:  VAGIFLKIAMFVFVQVLVYLILSKSSNLFSNDKKLRSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSSVRRERSDDS
        V+ + +K+ +F  VQ LVYLIL+KSSN+FS ++KLRSLSF+PARSVS+RRLLA LSD+PPGGE SPSSS        R  +DDS
Subjt:  VAGIFLKIAMFVFVQVLVYLILSKSSNLFSNDKKLRSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSSVRRERSDDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05575.1 unknown protein1.3e-1348.86Show/hide
Query:  LEFDVAGIFLKIAMFVFVQVLVYLILSKSSNLFSNDKKL-RSLSFKPARSVSIRRLLAALSDLPPGGELSPS-------SSVLTPSSV
        +E    G+ +K+++F  +Q LVYLILSKSS++FS  K + R+ SF+ ARS+SIRR+LA L D+P GGE+SPS       SS+ +PS +
Subjt:  LEFDVAGIFLKIAMFVFVQVLVYLILSKSSNLFSNDKKL-RSLSFKPARSVSIRRLLAALSDLPPGGELSPS-------SSVLTPSSV

AT2G31945.1 unknown protein5.4e-1254.79Show/hide
Query:  IFLKIAMFVFVQVLVYLILSKSSNLFSNDKKL-RSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSS
        + +K+A+F  VQ LVYLIL KSS +F+    L R+ SF+P RSVSIRR+LAAL D+P G ++SPSS+  + SS
Subjt:  IFLKIAMFVFVQVLVYLILSKSSNLFSNDKKL-RSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTCGATTTTGGAATTCGATGTCGCCGGGATCTTCCTCAAAATCGCCATGTTCGTCTTTGTTCAGGTTCTTGTGTATTTGATCCTCTCCAAATCATCCAATCTCTT
CTCCAACGACAAGAAATTGAGATCTCTCAGCTTTAAACCAGCTCGTTCCGTTAGTATTCGTCGGTTGCTAGCAGCTCTTTCCGATCTTCCACCCGGCGGTGAGCTTTCTC
CGTCGTCGAGTGTTCTAACTCCCTCGTCTGTTCGTCGGGAGCGTTCCGACGACAGTGGCAGGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCTCGATTTTGGAATTCGATGTCGCCGGGATCTTCCTCAAAATCGCCATGTTCGTCTTTGTTCAGGTTCTTGTGTATTTGATCCTCTCCAAATCATCCAATCTCTT
CTCCAACGACAAGAAATTGAGATCTCTCAGCTTTAAACCAGCTCGTTCCGTTAGTATTCGTCGGTTGCTAGCAGCTCTTTCCGATCTTCCACCCGGCGGTGAGCTTTCTC
CGTCGTCGAGTGTTCTAACTCCCTCGTCTGTTCGTCGGGAGCGTTCCGACGACAGTGGCAGGTTTTAA
Protein sequenceShow/hide protein sequence
MISILEFDVAGIFLKIAMFVFVQVLVYLILSKSSNLFSNDKKLRSLSFKPARSVSIRRLLAALSDLPPGGELSPSSSVLTPSSVRRERSDDSGRF