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Carg11250 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11250
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCalcium-binding EF-hand
Genome locationCarg_Chr14:5655704..5656567
RNA-Seq ExpressionCarg11250
SyntenyCarg11250
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018108.1 hypothetical protein SDJN02_19976, partial [Cucurbita argyrosperma subsp. argyrosperma]7.9e-70100Show/hide
Query:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN
        MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN
Subjt:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN

Query:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS
        ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS
Subjt:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS

XP_022934103.1 uncharacterized protein LOC111441377 [Cucurbita moschata]7.9e-70100Show/hide
Query:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN
        MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN
Subjt:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN

Query:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS
        ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS
Subjt:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS

XP_022983603.1 uncharacterized protein LOC111482160 [Cucurbita maxima]2.3e-6999.29Show/hide
Query:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN
        MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFE+FDCDKSGTVDAEEFRTEMKN
Subjt:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN

Query:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS
        ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS
Subjt:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS

XP_023526874.1 uncharacterized protein LOC111790245 [Cucurbita pepo subsp. pepo]5.1e-6998.58Show/hide
Query:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN
        MAVVVIDGSTVRNFVNDESHFKKSVDEAFA+LDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFE+FDCDKSGTVDAEEFRTEMKN
Subjt:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN

Query:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS
        ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS
Subjt:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS

XP_038905172.1 uncharacterized protein LOC120091281 [Benincasa hispida]4.8e-6795.74Show/hide
Query:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN
        MAVVVIDGSTVRNFVNDESHFKKS+DEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDV T PE+LTQLYDSIFE+FDCDKSGTVDA+EFRTEMKN
Subjt:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN

Query:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS
        ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS
Subjt:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS

TrEMBL top hitse value%identityAlignment
A0A0A0L9X6 Uncharacterized protein1.3e-6592.91Show/hide
Query:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN
        MAVVV+DGSTVRNFVNDESHF KS+D+AFA+LDLNNDGVLSRSELRKAFETLRLIETHFGVDV T PE+LTQLYDSIFE+FDCDKSGTVDAEEFRTEMKN
Subjt:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN

Query:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS
        ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKL QSS
Subjt:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS

A0A1S3CGR2 uncharacterized protein LOC1035002826.4e-6592.2Show/hide
Query:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN
        MAVVVIDGSTVRNFVNDE HF KS+D+AFA+LDLNNDGVLSRSELRKAFETLRLIETHFGVDV T PE+LTQLYDSIFE+FDCDKSGTVDAEEFRTEMKN
Subjt:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN

Query:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS
        ILLAIADGLGSSPIQMALDDGD+SFLKQAADLEASKL QSS
Subjt:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS

A0A5A7UE76 Calcium-binding EF-hand6.4e-6592.2Show/hide
Query:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN
        MAVVVIDGSTVRNFVNDE HF KS+D+AFA+LDLNNDGVLSRSELRKAFETLRLIETHFGVDV T PE+LTQLYDSIFE+FDCDKSGTVDAEEFRTEMKN
Subjt:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN

Query:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS
        ILLAIADGLGSSPIQMALDDGD+SFLKQAADLEASKL QSS
Subjt:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS

A0A6J1F6Q4 uncharacterized protein LOC1114413773.8e-70100Show/hide
Query:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN
        MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN
Subjt:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN

Query:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS
        ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS
Subjt:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS

A0A6J1J7W5 uncharacterized protein LOC1114821601.1e-6999.29Show/hide
Query:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN
        MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFE+FDCDKSGTVDAEEFRTEMKN
Subjt:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN

Query:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS
        ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS
Subjt:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein1.5e-1032.79Show/hide
Query:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN
        M   VI   T+  F++D   F+   ++ F  LDL+ +G+LS SELR+    +  +E+      V P ++   +Y++IFE+F  D    +  + FR  +  
Subjt:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN

Query:  ILLAIADGLGSSPIQMAL-DDG
        IL A+A G+G+SP+ M + +DG
Subjt:  ILLAIADGLGSSPIQMAL-DDG

AT2G44310.1 Calcium-binding EF-hand family protein5.3e-5676.6Show/hide
Query:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN
        M VV+IDGSTVR+FV+DE  FKKSVDE FAALDLN DGVLSRSELRKAFE++RL+E+HFGVDVVTP ++LT LYDSIFEKFD D+SG+VD EEFR+EMK 
Subjt:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN

Query:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS
        I+LAIADGLGS PI M LDD D +FLK+AADLEASKL ++S
Subjt:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS

AT4G38810.2 Calcium-binding EF-hand family protein5.4e-0830.51Show/hide
Query:  VIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKNILLA
        V+DGS +   V +E  F K V++ F  LD + DG LS +EL+ A      I    G+           +Y  +  +F       V   EF+  + +ILL 
Subjt:  VIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKNILLA

Query:  IADGLGSSPIQMALDDGD
        +A GL   PI +   DG+
Subjt:  IADGLGSSPIQMALDDGD

AT5G28830.1 calcium-binding EF hand family protein8.9e-1130.25Show/hide
Query:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN
        + V ++DG+ ++ F+ DE  F    +  F  LD  + G L +SE+RKA         H GV++  PP     + D I +K D D    +   +F   ++ 
Subjt:  MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKN

Query:  ILLAIADGLGSSPIQMALD
        +L  IAD L   PI + L+
Subjt:  ILLAIADGLGSSPIQMALD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGTGGTCGTAATCGACGGATCGACGGTGCGAAACTTCGTGAACGACGAATCTCACTTCAAGAAGAGCGTGGACGAAGCCTTCGCCGCTCTGGATCTCAACAACGA
CGGCGTTCTGTCTCGATCCGAACTCCGCAAGGCCTTCGAGACACTCCGCCTGATCGAGACTCACTTCGGCGTCGACGTCGTCACTCCGCCGGAGAAACTCACTCAACTCT
ACGATTCGATCTTCGAGAAGTTTGATTGCGACAAAAGCGGCACCGTCGATGCAGAAGAGTTTCGGACGGAGATGAAGAACATTTTGCTCGCAATCGCCGATGGATTAGGC
TCGTCTCCGATTCAAATGGCGCTCGATGACGGCGATCAGAGTTTCCTCAAGCAAGCCGCAGATCTGGAGGCTTCAAAGCTCGCTCAATCATCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGTGGTCGTAATCGACGGATCGACGGTGCGAAACTTCGTGAACGACGAATCTCACTTCAAGAAGAGCGTGGACGAAGCCTTCGCCGCTCTGGATCTCAACAACGA
CGGCGTTCTGTCTCGATCCGAACTCCGCAAGGCCTTCGAGACACTCCGCCTGATCGAGACTCACTTCGGCGTCGACGTCGTCACTCCGCCGGAGAAACTCACTCAACTCT
ACGATTCGATCTTCGAGAAGTTTGATTGCGACAAAAGCGGCACCGTCGATGCAGAAGAGTTTCGGACGGAGATGAAGAACATTTTGCTCGCAATCGCCGATGGATTAGGC
TCGTCTCCGATTCAAATGGCGCTCGATGACGGCGATCAGAGTTTCCTCAAGCAAGCCGCAGATCTGGAGGCTTCAAAGCTCGCTCAATCATCCTGATTCGCCGTTTATGA
TGGAAAGAGCGATTCAGATTTAAACCTGTGGAGAGAAAAACGAGCAGATGAAGAACGAACAGGATCAATATCTAGGAACAATGTAAAATGGAGAAAATAAACGTTTGCTG
GAGTTTTGTTTGCTCTTCTTTTTGGGGCAATTTATTCTAGAATTTGTATCGGTGTTTGTTTGTTCGTTAGCGATTTTCCGTTTTTTCCGATTGAAATCGAGGCATGGGCT
CACCCACTGGTCCATCGAAACAGGCTTCTCCAGGCCTCAGAAAATCGCAGACGCATCCATTTGATTTTTCTTAATTTAGGACCATTCTT
Protein sequenceShow/hide protein sequence
MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKNILLAIADGLG
SSPIQMALDDGDQSFLKQAADLEASKLAQSS