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Carg11256 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11256
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr14:5691641..5692856
RNA-Seq ExpressionCarg11256
SyntenyCarg11256
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018114.1 hypothetical protein SDJN02_19982, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-81100Show/hide
Query:  MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLGGNGKDFRLGSRP
        MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLGGNGKDFRLGSRP
Subjt:  MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLGGNGKDFRLGSRP

Query:  QAQIPNLRSNHNLGRNHVGPTGACPNLVRLEFRSSDAAQPVRQSHPNPSASCSNAA
        QAQIPNLRSNHNLGRNHVGPTGACPNLVRLEFRSSDAAQPVRQSHPNPSASCSNAA
Subjt:  QAQIPNLRSNHNLGRNHVGPTGACPNLVRLEFRSSDAAQPVRQSHPNPSASCSNAA
XP_022935068.1 uncharacterized protein LOC111442048 [Cucurbita moschata]7.3e-40100Show/hide
Query:  MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLG
        MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLG
Subjt:  MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLG
XP_022983433.1 uncharacterized protein LOC111482039 [Cucurbita maxima]4.7e-3997.73Show/hide
Query:  MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLG
        MVLESILSSPHRRHPPFRKQFPANELGSWS LFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQ+ELCRLEHAEASLG
Subjt:  MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLG
XP_023526662.1 uncharacterized protein LOC111790093 isoform X1 [Cucurbita pepo subsp. pepo]2.1e-3998.86Show/hide
Query:  MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLG
        MVLESILSSPHRRHPPFRKQFPANELGSWS LFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLG
Subjt:  MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLG
XP_023526663.1 uncharacterized protein LOC111790093 isoform X2 [Cucurbita pepo subsp. pepo]2.1e-3998.86Show/hide
Query:  MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLG
        MVLESILSSPHRRHPPFRKQFPANELGSWS LFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLG
Subjt:  MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLG
TrEMBL top hitse value%identityAlignment
A0A1S4E410 uncharacterized protein LOC1035012131.9e-3384.78Show/hide
Query:  MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLGGNGK
        MVL+SIL+SPHRR P FRKQFPANELGSWS LF RHRFLLTALALLT LCTIYLYFAITLGA  SSCSGLTG Q+ELCRLEHA+ASL  NGK
Subjt:  MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLGGNGK
A0A5D3DCR7 Uncharacterized protein1.9e-3384.78Show/hide
Query:  MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLGGNGK
        MVL+SIL+SPHRR P FRKQFPANELGSWS LF RHRFLLTALALLT LCTIYLYFAITLGA  SSCSGLTG Q+ELCRLEHA+ASL  NGK
Subjt:  MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLGGNGK
A0A6J1DJ35 uncharacterized protein LOC1110209592.9e-3488.51Show/hide
Query:  MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASL
        MVL+SIL+SPHRR P FRKQFPANELGSWS LFNRHRFLLTALALLT LCTIYLYFAITLGA  SSCSGLTGAQKELCR+EHA+ASL
Subjt:  MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASL
A0A6J1F9I3 uncharacterized protein LOC1114420483.5e-40100Show/hide
Query:  MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLG
        MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLG
Subjt:  MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLG
A0A6J1J7R5 uncharacterized protein LOC1114820392.3e-3997.73Show/hide
Query:  MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLG
        MVLESILSSPHRRHPPFRKQFPANELGSWS LFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQ+ELCRLEHAEASLG
Subjt:  MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16170.1 unknown protein3.6e-2156.38Show/hide
Query:  MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLGGNGKDF
        MVL+ ++SSP RR    +KQ+  +ELGSWS L  RH++LLTALALL  LCT+YLYFA+TLGA  SSC GLTG  K +C+L+  +A   G  K F
Subjt:  MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLGGNGKDF
AT1G79660.1 unknown protein2.0e-1955.43Show/hide
Query:  MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLGGNGK
        MVL+ I+SSP RR    +KQ+  ++LGS S +  RHRFLLTA+ LL  LCTIY+YFA+TLGA    CSG+TG  K +C++EH +AS   NGK
Subjt:  MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLGGNGK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTTGAGAGCATTCTATCTTCTCCTCATAGGAGGCACCCACCATTTAGAAAACAGTTTCCTGCAAATGAGTTGGGCAGTTGGTCCGCTCTCTTCAATCGACATCG
CTTCCTCTTAACCGCACTGGCACTCTTGACTTTACTTTGCACAATCTATCTTTACTTTGCTATCACATTAGGGGCTGCTGTGTCGTCTTGTTCGGGTTTGACTGGAGCTC
AAAAGGAGTTGTGTCGTCTGGAGCATGCTGAAGCTTCTCTGGGAGGAAATGGGAAGGATTTCCGCCTTGGGTCCAGACCTCAGGCTCAGATTCCGAACCTACGTTCGAAC
CATAATCTCGGCCGGAACCATGTCGGCCCGACAGGCGCGTGTCCAAACCTAGTTAGGTTGGAATTTCGCTCCTCAGATGCAGCCCAGCCCGTTCGTCAGTCGCATCCCAA
TCCGTCAGCGTCCTGCTCAAATGCAGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCTTGAGAGCATTCTATCTTCTCCTCATAGGAGGCACCCACCATTTAGAAAACAGTTTCCTGCAAATGAGTTGGGCAGTTGGTCCGCTCTCTTCAATCGACATCG
CTTCCTCTTAACCGCACTGGCACTCTTGACTTTACTTTGCACAATCTATCTTTACTTTGCTATCACATTAGGGGCTGCTGTGTCGTCTTGTTCGGGTTTGACTGGAGCTC
AAAAGGAGTTGTGTCGTCTGGAGCATGCTGAAGCTTCTCTGGGAGGAAATGGGAAGGATTTCCGCCTTGGGTCCAGACCTCAGGCTCAGATTCCGAACCTACGTTCGAAC
CATAATCTCGGCCGGAACCATGTCGGCCCGACAGGCGCGTGTCCAAACCTAGTTAGGTTGGAATTTCGCTCCTCAGATGCAGCCCAGCCCGTTCGTCAGTCGCATCCCAA
TCCGTCAGCGTCCTGCTCAAATGCAGCCTAG
Protein sequenceShow/hide protein sequence
MVLESILSSPHRRHPPFRKQFPANELGSWSALFNRHRFLLTALALLTLLCTIYLYFAITLGAAVSSCSGLTGAQKELCRLEHAEASLGGNGKDFRLGSRPQAQIPNLRSN
HNLGRNHVGPTGACPNLVRLEFRSSDAAQPVRQSHPNPSASCSNAA