; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg11257 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11257
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUbiquitin receptor RAD23
Genome locationCarg_Chr14:5694473..5697109
RNA-Seq ExpressionCarg11257
SyntenyCarg11257
Gene Ontology termsGO:0006289 - nucleotide-excision repair (biological process)
GO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0003684 - damaged DNA binding (molecular function)
GO:0031593 - polyubiquitin modification-dependent protein binding (molecular function)
GO:0043130 - ubiquitin binding (molecular function)
GO:0070628 - proteasome binding (molecular function)
InterPro domainsIPR004806 - UV excision repair protein Rad23
IPR006636 - Heat shock chaperonin-binding
IPR009060 - UBA-like superfamily
IPR015360 - XPC-binding domain
IPR015940 - Ubiquitin-associated domain
IPR036353 - XPC-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581617.1 Ubiquitin receptor RAD23b, partial [Cucurbita argyrosperma subsp. sororia]6.2e-140100Show/hide
Query:  SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEA
        SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEA
Subjt:  SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEA

Query:  SLPAPASGAPNTAPLNMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQA
        SLPAPASGAPNTAPLNMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQA
Subjt:  SLPAPASGAPNTAPLNMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQA

Query:  EPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
        EPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
Subjt:  EPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD

KAG7018115.1 Ubiquitin receptor RAD23b, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-145100Show/hide
Query:  MHFLFLFCSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGS
        MHFLFLFCSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGS
Subjt:  MHFLFLFCSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGS

Query:  GPATETEASLPAPASGAPNTAPLNMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNF
        GPATETEASLPAPASGAPNTAPLNMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNF
Subjt:  GPATETEASLPAPASGAPNTAPLNMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNF

Query:  EGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
        EGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
Subjt:  EGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD

XP_022934936.1 ubiquitin receptor RAD23b-like [Cucurbita moschata]6.2e-140100Show/hide
Query:  SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEA
        SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEA
Subjt:  SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEA

Query:  SLPAPASGAPNTAPLNMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQA
        SLPAPASGAPNTAPLNMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQA
Subjt:  SLPAPASGAPNTAPLNMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQA

Query:  EPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
        EPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
Subjt:  EPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD

XP_022983432.1 ubiquitin receptor RAD23b-like [Cucurbita maxima]6.2e-140100Show/hide
Query:  SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEA
        SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEA
Subjt:  SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEA

Query:  SLPAPASGAPNTAPLNMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQA
        SLPAPASGAPNTAPLNMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQA
Subjt:  SLPAPASGAPNTAPLNMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQA

Query:  EPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
        EPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
Subjt:  EPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD

XP_023528872.1 ubiquitin receptor RAD23b-like [Cucurbita pepo subsp. pepo]6.2e-140100Show/hide
Query:  SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEA
        SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEA
Subjt:  SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEA

Query:  SLPAPASGAPNTAPLNMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQA
        SLPAPASGAPNTAPLNMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQA
Subjt:  SLPAPASGAPNTAPLNMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQA

Query:  EPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
        EPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
Subjt:  EPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD

TrEMBL top hitse value%identityAlignment
A0A0A0LF05 Ubiquitin receptor RAD232.1e-13394.66Show/hide
Query:  SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEA
        SAPKNTTSTS+RVTD++QTDTYGQAASNLVAGNNLEQT+QQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSG ATET+A
Subjt:  SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEA

Query:  SLPAPASGAPNTAPLNMFPQEALSA----GGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEM
        S+PAP SGAPNTAPLNMFPQEALSA    GGG LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEM
Subjt:  SLPAPASGAPNTAPLNMFPQEALSA----GGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEM

Query:  FEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
        FEQAEPDMPHAINVTP EQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
Subjt:  FEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD

A0A1S3CIK2 Ubiquitin receptor RAD231.0e-13294.66Show/hide
Query:  SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEA
        SA KNTTSTSDRVTD++QTDTYGQAASNLVAGNNLEQT+QQLMDMGGG WDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSG ATET+A
Subjt:  SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEA

Query:  SLPAPASGAPNTAPLNMFPQEALSAGGGG----LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEM
        S+PAP SGAPNTAPLNMFPQEALSAGGGG    LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEM
Subjt:  SLPAPASGAPNTAPLNMFPQEALSAGGGG----LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEM

Query:  FEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
        FEQAEPDMPHAINVTP EQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
Subjt:  FEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD

A0A5A7SUP1 Ubiquitin receptor RAD231.0e-13294.66Show/hide
Query:  SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEA
        SA KNTTSTSDRVTD++QTDTYGQAASNLVAGNNLEQT+QQLMDMGGG WDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSG ATET+A
Subjt:  SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEA

Query:  SLPAPASGAPNTAPLNMFPQEALSAGGGG----LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEM
        S+PAP SGAPNTAPLNMFPQEALSAGGGG    LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEM
Subjt:  SLPAPASGAPNTAPLNMFPQEALSAGGGG----LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEM

Query:  FEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
        FEQAEPDMPHAINVTP EQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
Subjt:  FEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD

A0A6J1F373 Ubiquitin receptor RAD233.0e-140100Show/hide
Query:  SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEA
        SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEA
Subjt:  SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEA

Query:  SLPAPASGAPNTAPLNMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQA
        SLPAPASGAPNTAPLNMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQA
Subjt:  SLPAPASGAPNTAPLNMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQA

Query:  EPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
        EPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
Subjt:  EPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD

A0A6J1IZA3 Ubiquitin receptor RAD233.0e-140100Show/hide
Query:  SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEA
        SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEA
Subjt:  SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEA

Query:  SLPAPASGAPNTAPLNMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQA
        SLPAPASGAPNTAPLNMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQA
Subjt:  SLPAPASGAPNTAPLNMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQA

Query:  EPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
        EPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
Subjt:  EPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD

SwissProt top hitse value%identityAlignment
Q40742 Probable ubiquitin receptor RAD237.0e-7053.61Show/hide
Query:  PKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATE----T
        P  T S +  V  S + D YGQA SNLVAG+NLE TIQ +++MGGG WDR+ V+ AL AA+NNPERAV+YLYSG+PE  ++ VP         T+    T
Subjt:  PKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATE----T

Query:  EASLPAPASGAPNTAPLNMFPQEA--LSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGE-
        + + P+  S  PN +PL++FPQ     S    GLG+L+ LRNN QF+ L ++V  NPQILQP+LQELGKQNPQ+L+LIQ++ AEFL LINEP +  + E 
Subjt:  EASLPAPASGAPNTAPLNMFPQEA--LSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGE-

Query:  MFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
        + +Q    MP  I VTP+E  AI RLEAMGFDRALV++ F AC+++E+LAANYLL++  +FDD
Subjt:  MFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD

Q84L30 Ubiquitin receptor RAD23d8.0e-8262.55Show/hide
Query:  TSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEV-----AVPVGRFGSGP-ATETEA
        T+ +     S+QTD YGQAASNLVAG  LE T+QQ++DMGGG+WDR+TVVRALRAA+NNPERAV+YLYSGIP  AE+     A   G   + P A   +A
Subjt:  TSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEV-----AVPVGRFGSGP-ATETEA

Query:  SLPAPASGAPNTAPLNMFPQEALSA-GGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQ
        + PA A+G PN  PLN+FPQ   +A  G G G+L+FLRN+ QFQALR MV  NPQILQPMLQELGKQNPQL+RLIQ+H A+FL+LINEPV+  E  M EQ
Subjt:  SLPAPASGAPNTAPLNMFPQEALSA-GGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQ

Query:  AEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
         E  MP A+ VTP+E+ AIERLE MGFDRA+V+E F AC++NEELAANYLL++  +F+D
Subjt:  AEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD

Q84L31 Ubiquitin receptor RAD23c5.0e-7660.15Show/hide
Query:  NTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAE---VAVPVGRFG--SGPATETE
        ++T   D      Q D YGQAASNL AG+NLE TIQQ++DMGGG WDRETVV ALRAA+NNPERAV+YLY+GIPE AE   VA P    G  + P  +T+
Subjt:  NTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAE---VAVPVGRFG--SGPATETE

Query:  ASLPAPASGAPNTAPLNMFPQEALSAGGG-GLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVD------NF
            APASG PN  PL++FPQ   + GG  G G+L+FLRN+ QFQALR MV  NPQ+LQPMLQELGKQNP L+RLIQDH A+FL+LINEPV+      N 
Subjt:  ASLPAPASGAPNTAPLNMFPQEALSAGGG-GLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVD------NF

Query:  EGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
         G+M   A    P AI VT +E+ AIERLEAMGF+RALV+E F AC++NEELAANYLL++  +F++
Subjt:  EGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD

Q84L32 Probable ubiquitin receptor RAD23a7.4e-8866.02Show/hide
Query:  TTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAP
        + ST  +   + Q+DTYGQAAS LV+G+++EQ +QQ+M+MGGG+WD+ETV RALRAAYNNPERAVDYLYSGIPE+  V +P     SG  +  E + P P
Subjt:  TTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAP

Query:  ASGAPNTAPLNMFPQEALS-AGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEG--EMFEQAEP
         SG PN++PL++FPQEA+S A GG LG+LEFLR N QFQ LR+MV++NPQILQPMLQELGKQNPQLLRLIQ++ AEFLQL+NEP +  +G  ++F+Q + 
Subjt:  ASGAPNTAPLNMFPQEALS-AGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEG--EMFEQAEP

Query:  DMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
        +MPH++NVTP+EQ +IERLEAMGFDRA+VIEAFL+CDRNEELAANYLLE+S DF+D
Subjt:  DMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD

Q84L33 Ubiquitin receptor RAD23b7.4e-9670.83Show/hide
Query:  SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGR---FGSGPATE
        S+P   +    +   + QTDTYGQAAS LV+G++LEQ +QQ+M+MGGG+WD+ETV RALRAAYNNPERAVDYLYSGIP++AEVAVPV      GSG    
Subjt:  SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGR---FGSGPATE

Query:  TEASLPAPASGAPNTAPLNMFPQEALSAGGGG-LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVD--NFEG
          A+  APASG PN++PL++FPQE ++A G G LG+LEFLRNN QFQ LRTMVH+NPQILQPMLQELGKQNPQLLRLIQ++ AEFLQL+NEP +  + EG
Subjt:  TEASLPAPASGAPNTAPLNMFPQEALSAGGGG-LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVD--NFEG

Query:  EMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
        +MF+Q E +MPHAINVTP EQ AI+RLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDF+D
Subjt:  EMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD

Arabidopsis top hitse value%identityAlignment
AT1G16190.1 Rad23 UV excision repair protein family5.3e-8966.02Show/hide
Query:  TTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAP
        + ST  +   + Q+DTYGQAAS LV+G+++EQ +QQ+M+MGGG+WD+ETV RALRAAYNNPERAVDYLYSGIPE+  V +P     SG  +  E + P P
Subjt:  TTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAP

Query:  ASGAPNTAPLNMFPQEALS-AGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEG--EMFEQAEP
         SG PN++PL++FPQEA+S A GG LG+LEFLR N QFQ LR+MV++NPQILQPMLQELGKQNPQLLRLIQ++ AEFLQL+NEP +  +G  ++F+Q + 
Subjt:  ASGAPNTAPLNMFPQEALS-AGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEG--EMFEQAEP

Query:  DMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
        +MPH++NVTP+EQ +IERLEAMGFDRA+VIEAFL+CDRNEELAANYLLE+S DF+D
Subjt:  DMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD

AT1G79650.1 Rad23 UV excision repair protein family5.3e-9770.83Show/hide
Query:  SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGR---FGSGPATE
        S+P   +    +   + QTDTYGQAAS LV+G++LEQ +QQ+M+MGGG+WD+ETV RALRAAYNNPERAVDYLYSGIP++AEVAVPV      GSG    
Subjt:  SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGR---FGSGPATE

Query:  TEASLPAPASGAPNTAPLNMFPQEALSAGGGG-LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVD--NFEG
          A+  APASG PN++PL++FPQE ++A G G LG+LEFLRNN QFQ LRTMVH+NPQILQPMLQELGKQNPQLLRLIQ++ AEFLQL+NEP +  + EG
Subjt:  TEASLPAPASGAPNTAPLNMFPQEALSAGGGG-LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVD--NFEG

Query:  EMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
        +MF+Q E +MPHAINVTP EQ AI+RLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDF+D
Subjt:  EMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD

AT1G79650.2 Rad23 UV excision repair protein family5.3e-9770.83Show/hide
Query:  SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGR---FGSGPATE
        S+P   +    +   + QTDTYGQAAS LV+G++LEQ +QQ+M+MGGG+WD+ETV RALRAAYNNPERAVDYLYSGIP++AEVAVPV      GSG    
Subjt:  SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGR---FGSGPATE

Query:  TEASLPAPASGAPNTAPLNMFPQEALSAGGGG-LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVD--NFEG
          A+  APASG PN++PL++FPQE ++A G G LG+LEFLRNN QFQ LRTMVH+NPQILQPMLQELGKQNPQLLRLIQ++ AEFLQL+NEP +  + EG
Subjt:  TEASLPAPASGAPNTAPLNMFPQEALSAGGGG-LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVD--NFEG

Query:  EMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
        +MF+Q E +MPHAINVTP EQ AI+RLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDF+D
Subjt:  EMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD

AT1G79650.4 Rad23 UV excision repair protein family3.1e-9774.9Show/hide
Query:  QTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGR---FGSGPATETEASLPAPASGAPNTAP
        QTDTYGQAAS LV+G++LEQ +QQ+M+MGGG+WD+ETV RALRAAYNNPERAVDYLYSGIP++AEVAVPV      GSG      A+  APASG PN++P
Subjt:  QTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGR---FGSGPATETEASLPAPASGAPNTAP

Query:  LNMFPQEALSAGGGG-LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVD--NFEGEMFEQAEPDMPHAINVT
        L++FPQE ++A G G LG+LEFLRNN QFQ LRTMVH+NPQILQPMLQELGKQNPQLLRLIQ++ AEFLQL+NEP +  + EG+MF+Q E +MPHAINVT
Subjt:  LNMFPQEALSAGGGG-LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVD--NFEGEMFEQAEPDMPHAINVT

Query:  PDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
        P EQ AI+RLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDF+D
Subjt:  PDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD

AT5G38470.1 Rad23 UV excision repair protein family5.7e-8362.55Show/hide
Query:  TSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEV-----AVPVGRFGSGP-ATETEA
        T+ +     S+QTD YGQAASNLVAG  LE T+QQ++DMGGG+WDR+TVVRALRAA+NNPERAV+YLYSGIP  AE+     A   G   + P A   +A
Subjt:  TSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEV-----AVPVGRFGSGP-ATETEA

Query:  SLPAPASGAPNTAPLNMFPQEALSA-GGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQ
        + PA A+G PN  PLN+FPQ   +A  G G G+L+FLRN+ QFQALR MV  NPQILQPMLQELGKQNPQL+RLIQ+H A+FL+LINEPV+  E  M EQ
Subjt:  SLPAPASGAPNTAPLNMFPQEALSA-GGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQ

Query:  AEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
         E  MP A+ VTP+E+ AIERLE MGFDRA+V+E F AC++NEELAANYLL++  +F+D
Subjt:  AEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTTTTTGTTCTTGTTTTGCAGTGCCCCCAAGAACACTACGTCTACTTCAGACAGGGTGACAGATAGTATGCAAACAGATACATATGGTCAAGCTGCTTCAAATTT
GGTCGCTGGTAATAATCTGGAACAGACCATTCAACAATTAATGGATATGGGAGGTGGCAACTGGGACAGAGAAACAGTTGTTCGTGCACTAAGAGCTGCTTATAACAATC
CAGAGCGAGCAGTGGATTACTTGTACTCTGGTATTCCGGAATCTGCAGAAGTTGCAGTACCAGTGGGTCGTTTTGGTTCTGGTCCAGCCACTGAAACTGAGGCATCCCTT
CCTGCACCTGCTTCTGGAGCACCCAACACAGCCCCCTTGAATATGTTTCCTCAGGAGGCACTTTCTGCTGGCGGTGGTGGCCTTGGATCTCTTGAATTCCTTAGAAACAA
TCCGCAGTTTCAAGCCTTGCGGACGATGGTGCATACAAACCCTCAAATCTTACAGCCCATGCTTCAAGAACTTGGAAAACAGAATCCCCAGCTTTTGAGACTCATTCAGG
ATCATCATGCAGAGTTCCTTCAGTTAATTAATGAACCTGTTGACAATTTTGAGGGAGAAATGTTTGAACAGGCTGAGCCAGACATGCCTCATGCCATTAATGTTACTCCA
GACGAACAGGCAGCCATTGAACGACTCGAGGCAATGGGATTCGATCGAGCCTTGGTGATCGAGGCATTTTTGGCATGCGATCGCAACGAGGAACTAGCAGCTAACTACTT
ACTGGAGAATTCTGGAGATTTTGACGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATTTTTTGTTCTTGTTTTGCAGTGCCCCCAAGAACACTACGTCTACTTCAGACAGGGTGACAGATAGTATGCAAACAGATACATATGGTCAAGCTGCTTCAAATTT
GGTCGCTGGTAATAATCTGGAACAGACCATTCAACAATTAATGGATATGGGAGGTGGCAACTGGGACAGAGAAACAGTTGTTCGTGCACTAAGAGCTGCTTATAACAATC
CAGAGCGAGCAGTGGATTACTTGTACTCTGGTATTCCGGAATCTGCAGAAGTTGCAGTACCAGTGGGTCGTTTTGGTTCTGGTCCAGCCACTGAAACTGAGGCATCCCTT
CCTGCACCTGCTTCTGGAGCACCCAACACAGCCCCCTTGAATATGTTTCCTCAGGAGGCACTTTCTGCTGGCGGTGGTGGCCTTGGATCTCTTGAATTCCTTAGAAACAA
TCCGCAGTTTCAAGCCTTGCGGACGATGGTGCATACAAACCCTCAAATCTTACAGCCCATGCTTCAAGAACTTGGAAAACAGAATCCCCAGCTTTTGAGACTCATTCAGG
ATCATCATGCAGAGTTCCTTCAGTTAATTAATGAACCTGTTGACAATTTTGAGGGAGAAATGTTTGAACAGGCTGAGCCAGACATGCCTCATGCCATTAATGTTACTCCA
GACGAACAGGCAGCCATTGAACGACTCGAGGCAATGGGATTCGATCGAGCCTTGGTGATCGAGGCATTTTTGGCATGCGATCGCAACGAGGAACTAGCAGCTAACTACTT
ACTGGAGAATTCTGGAGATTTTGACGATTAACAAAAGAAGAATTAATTAATGTTAACCGCTGTGGATTCATTATTTTTGGTGCTGAGGTGAATTGTTTCCCTTTTCAGCA
TTATTCCGAGTCTGTTCTTGCATTGCATTTTACATACTCCACTAATAAATAGGAAAATTAATTGTTCAAGTGTATGGTGTTTCCGATTTAGAGAATTGGAATCTTTATGT
TTTATTTAAAAGCTCATTTGTTGGTAGCTAGTTCGTTACAACATTATTGCAGATAGATCATGAGATTTTATATACTTTTCTGATTATCGTGTAAATATAATTGTTGAAAA
ATATCAACAGATTTTGACATGACATTTTGTTTCTTGTGATATGTTTATGCTATTAACATAAATATATATATATATATATATATATATATATAT
Protein sequenceShow/hide protein sequence
MHFLFLFCSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASL
PAPASGAPNTAPLNMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTP
DEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD