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Carg11280 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11280
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like
Genome locationCarg_Chr14:6120807..6126825
RNA-Seq ExpressionCarg11280
SyntenyCarg11280
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR007741 - Ribosomal protein/NADH dehydrogenase domain
IPR016464 - NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008465169.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis melo]3.0e-4496.84Show/hide
Query:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LKTLNPKFPILIRECSG+EPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

XP_022935669.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita moschata]3.5e-45100Show/hide
Query:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

XP_022983615.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita maxima]1.7e-4498.95Show/hide
Query:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQI KALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

XP_023526206.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita pepo subsp. pepo]1.7e-4498.95Show/hide
Query:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEK YKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

XP_038906356.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Benincasa hispida]8.6e-4495.79Show/hide
Query:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQ+SPSSAPAR FVEKNYK+LKTLNPKFPILIRECSGVEPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

TrEMBL top hitse value%identityAlignment
A0A0A0LDA2 L51_S25_CI-B8 domain-containing protein4.2e-4495.79Show/hide
Query:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG+LSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LKTLNPKFPILIRECSG+EPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

A0A1S3CN67 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 21.4e-4496.84Show/hide
Query:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LKTLNPKFPILIRECSG+EPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

A0A5A7T2I6 NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 21.4e-4496.84Show/hide
Query:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LKTLNPKFPILIRECSG+EPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

A0A6J1F628 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like1.7e-45100Show/hide
Query:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

A0A6J1J6D3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like8.4e-4598.95Show/hide
Query:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQI KALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

SwissProt top hitse value%identityAlignment
P0CB79 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 21.0e-1854.12Show/hide
Query:  LKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        L+E+RI LCQ SP S   R F+EK Y ELK  NP  PILIRECS V+P+LWARY  G E+   L   S  Q+++ALE+++K  AS
Subjt:  LKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

P0CB80 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 21.0e-1854.12Show/hide
Query:  LKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        L+E+RI LCQ SP S   R F+EK Y ELK  NP  PILIRECS V+P+LWARY  G E+   L   S  Q+++ALE+++K  AS
Subjt:  LKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

Q02370 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 22.9e-1852.87Show/hide
Query:  RGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLV
        RG+L   L+E+RI LCQ SP S   R F+EK Y ELK  NP  PILIRECS V+P+LWARY  G E+   L   S  Q+++ALE+++
Subjt:  RGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLV

Q4R5E2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 28.4e-1853.75Show/hide
Query:  LKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLV
        L+E+RI LCQ SP S   R F+EK Y ELK  NP  PILIRECS V+P+LWARY  G E+   L   S  Q+++ALE+++
Subjt:  LKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLV

Q9FIJ2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 22.8e-3774.74Show/hide
Query:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG +SK++KELRILLCQ+SP+SAP R FVEKNYK+LK+LNPK PILIRECSGV+PQ+WARYDMG+ER   L+GL+E QI KALE+LVK GA+
Subjt:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

Arabidopsis top hitse value%identityAlignment
AT5G47890.1 NADH-ubiquinone oxidoreductase B8 subunit, putative2.0e-3874.74Show/hide
Query:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG +SK++KELRILLCQ+SP+SAP R FVEKNYK+LK+LNPK PILIRECSGV+PQ+WARYDMG+ER   L+GL+E QI KALE+LVK GA+
Subjt:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGGATCTTGCTCTGCCAAACCTCTCCTTCAAGCGCCCCCGCTAGGGCATTTGTGGAAAAGAATTACAA
AGAACTCAAGACTTTGAATCCCAAATTTCCAATATTGATCCGGGAATGCAGTGGGGTCGAGCCGCAATTGTGGGCTAGATATGACATGGGCATTGAAAGGGTTGCTCGTC
TAGAGGGTTTGAGCGAGGCACAGATCTCGAAGGCACTTGAAGACCTAGTCAAAGTTGGGGCATCCTGA
mRNA sequenceShow/hide mRNA sequence
TGACCACCGAACTGATTGCAATAAGACCGTAAAAATAACAAAAATTCCGTCGCTACTTGGCGTTGGCGTAGCCTCGATAGGCATCTGGGAAGGAGCTTCATTCATCTGAG
AGCTAGAGTGACTTCACGAACAGCGAGAGACGGAGAAATGGCCTGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGGATCTTGCTCTGCCAAACCTCTCCTTCAA
GCGCCCCCGCTAGGGCATTTGTGGAAAAGAATTACAAAGAACTCAAGACTTTGAATCCCAAATTTCCAATATTGATCCGGGAATGCAGTGGGGTCGAGCCGCAATTGTGG
GCTAGATATGACATGGGCATTGAAAGGGTTGCTCGTCTAGAGGGTTTGAGCGAGGCACAGATCTCGAAGGCACTTGAAGACCTAGTCAAAGTTGGGGCATCCTGAAGGAG
TAATCTGCTGTGCTATTGTACTGCAGCAGACGTCAATAAATGCACGAGTGGAACGTTTGTTGAGATGCTTTTGTGTTTACATTCTGTTCGCTCAGCTCTTTTGAGATTAT
TGCTCAAATATTCATCTTCAGAAATCATGTTTCTGGTACGTATGTCTATTTGTCTATATGGAGAGTTATTGTCATAATGGTGATAATGAGTTCCACATTTTCCTCAAACA
GTTGGTCACAATAATTTCATAGAATTGGATACGTTCTATTTTTAGATGGAATGGATCTAAAATGCTTATTTCTATCTGAAATTTTCATCTTCATTCAAGTATCTTTTTTC
ATTGGATATTCAGCTTACATTGTTGATGATATATATCTT
Protein sequenceShow/hide protein sequence
MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS