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Carg11295 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11295
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncytochrome b-c1 complex subunit 6-like
Genome locationCarg_Chr16:2013391..2016968
RNA-Seq ExpressionCarg11295
SyntenyCarg11295
Gene Ontology termsGO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process)
GO:0005750 - mitochondrial respiratory chain complex III (cellular component)
InterPro domainsIPR003422 - Cytochrome b-c1 complex, subunit 6
IPR023184 - Ubiquinol-cytochrome C reductase hinge domain
IPR036811 - Ubiquinol-cytochrome C reductase hinge domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650514.1 hypothetical protein Csa_011326 [Cucumis sativus]4.2e-4088.89Show/hide
Query:  FEAVQGFLHYSFAPSQYYLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        F   Q FL  SF PSQY LLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFDYWSCIDKCVAPKL TKLK
Subjt:  FEAVQGFLHYSFAPSQYYLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

KAG6576964.1 Cytochrome b-c1 complex subunit 6-1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.6e-4598.85Show/hide
Query:  VQGFLHYSFAPSQYYLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        +QGFLHYSFAPSQYYLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
Subjt:  VQGFLHYSFAPSQYYLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

KAG6600342.1 Cytochrome b-c1 complex subunit 6-1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]5.9e-4291.95Show/hide
Query:  VQGFLHYSFAPSQYYLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        +QGFL +SFAPSQ YLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFDYWSC+DKCVAPKLFTK+K
Subjt:  VQGFLHYSFAPSQYYLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

KAG7014985.1 hypothetical protein SDJN02_22616, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-48100Show/hide
Query:  MFEAVQGFLHYSFAPSQYYLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        MFEAVQGFLHYSFAPSQYYLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
Subjt:  MFEAVQGFLHYSFAPSQYYLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

XP_022942987.1 cytochrome b-c1 complex subunit 6-like [Cucurbita moschata]5.9e-4291.95Show/hide
Query:  VQGFLHYSFAPSQYYLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        +QGFL +SFAPSQ YLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFDYWSC+DKCVAPKLFTK+K
Subjt:  VQGFLHYSFAPSQYYLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

TrEMBL top hitse value%identityAlignment
A0A1S3C350 Cytochrome b-c1 complex subunit 61.3e-3498.55Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

A0A6J1E3D4 Cytochrome b-c1 complex subunit 65.8e-35100Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

A0A6J1FRR8 cytochrome b-c1 complex subunit 6-like2.9e-4291.95Show/hide
Query:  VQGFLHYSFAPSQYYLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        +QGFL +SFAPSQ YLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFDYWSC+DKCVAPKLFTK+K
Subjt:  VQGFLHYSFAPSQYYLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

A0A6J1J694 Cytochrome b-c1 complex subunit 62.9e-3495.65Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFDYWSC+DKCVAPKLFTK+K
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

A0A6J1J7A4 Cytochrome b-c1 complex subunit 65.8e-35100Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

SwissProt top hitse value%identityAlignment
P48504 Cytochrome b-c1 complex subunit 69.5e-2775.36Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        M+DEE VD K  LE +CKPKCV+ L EYQAC KR++GDESGHKHCTGQYFDYW CIDKCVA KLF  LK
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

Q0WWE3 Cytochrome b-c1 complex subunit 6-1, mitochondrial2.3e-3388.41Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        MAD+E VD K+YLEE+CKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFDYW CIDKCVAPKLF KLK
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

Q1ZXP3 Probable cytochrome b-c1 complex subunit 61.7e-0744.83Show/hide
Query:  LEEACKPKCVKPLLEYQACVKRIQGDESGHK-HCTGQYFDYWSCIDKCVAPKLFTKLK
        ++E C   C K    YQAC  R+   E   K +C GQ+ ++  CIDKCV PKLF +LK
Subjt:  LEEACKPKCVKPLLEYQACVKRIQGDESGHK-HCTGQYFDYWSCIDKCVAPKLFTKLK

Q9SJV7 Cytochrome b-c1 complex subunit 6-2, mitochondrial1.5e-2783.61Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVA
        M +E+ VDQKRY EE+CKPKCVKPLLEYQACVKRIQ DESGHKHCTGQYFDYW C+DKCV+
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVA

Arabidopsis top hitse value%identityAlignment
AT1G15120.1 Ubiquinol-cytochrome C reductase hinge protein1.7e-3488.41Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        MAD+E VD K+YLEE+CKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFDYW CIDKCVAPKLF KLK
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

AT1G15120.2 Ubiquinol-cytochrome C reductase hinge protein3.6e-2988.14Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKC
        MAD+E VD K+YLEE+CKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFDYW CIDKC
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKC

AT2G01090.1 Ubiquinol-cytochrome C reductase hinge protein1.0e-2883.61Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVA
        M +E+ VDQKRY EE+CKPKCVKPLLEYQACVKRIQ DESGHKHCTGQYFDYW C+DKCV+
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVA

AT2G01090.2 Ubiquinol-cytochrome C reductase hinge protein1.0e-2883.61Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVA
        M +E+ VDQKRY EE+CKPKCVKPLLEYQACVKRIQ DESGHKHCTGQYFDYW C+DKCV+
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGAGGCAGTTCAAGGTTTTCTTCACTACTCTTTTGCTCCAAGTCAGTACTATTTATTAGCAATGGCGGATGAAGAACCTGTTGATCAGAAAAGGTATCTTGAAGA
AGCTTGCAAGCCCAAGTGTGTGAAACCACTACTTGAATATCAGGCGTGCGTGAAGAGAATCCAAGGGGACGAGAGTGGTCATAAGCATTGCACTGGACAATATTTTGATT
ACTGGTCTTGCATCGACAAATGTGTTGCACCAAAACTATTTACGAAACTGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGAGGCAGTTCAAGGTTTTCTTCACTACTCTTTTGCTCCAAGTCAGTACTATTTATTAGCAATGGCGGATGAAGAACCTGTTGATCAGAAAAGGTATCTTGAAGA
AGCTTGCAAGCCCAAGTGTGTGAAACCACTACTTGAATATCAGGCGTGCGTGAAGAGAATCCAAGGGGACGAGAGTGGTCATAAGCATTGCACTGGACAATATTTTGATT
ACTGGTCTTGCATCGACAAATGTGTTGCACCAAAACTATTTACGAAACTGAAGTAATGGACAATTGTTAGGGATGTGGGGATCCTTTCCTTTTGTGCTTGATTTTTTATG
CAACCTGTTTTTGTGGACTTGGTTTTTGCATCTACAAAAAAATGCCAAGGGCTGTGCAATTTTATAAAAATTATGAAGACCTTTAACCATGGTCAATAAGAAAGGATGTT
GGATTCACGTTTTGAGCTTGTGAAAACTTCTTCCTTTAATGCTATGATTGCTTTATATAAACATTAGTGATCTAAAACCAGTTGTTTCAGAATTTGCTGTTACTCGGTTT
GTCTGATGGCTGTGCATTTTGTGAATAATCTGCCCATTGAGGTTCAGTTTGGGACAAGTAAATTATCACTTTTTGGTCCAAGGCCTGCTTTCTAGTTTACACAGGCGGAC
GATG
Protein sequenceShow/hide protein sequence
MFEAVQGFLHYSFAPSQYYLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK