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Carg11327 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11327
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionE1B protein, small T-antigen like
Genome locationCarg_Chr16:2238706..2239143
RNA-Seq ExpressionCarg11327
SyntenyCarg11327
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456033.1 PREDICTED: uncharacterized protein LOC103496084 [Cucumis melo]1.6e-7396.5Show/hide
Query:  SSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAI
        +S GF LICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAI
Subjt:  SSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAI

Query:  WRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
        WRVYFERKLEDLA+DWPRQVVGDVTLALSWVFFLVYSWREKYD
Subjt:  WRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD

XP_022923014.1 uncharacterized protein LOC111430823 isoform X2 [Cucurbita moschata]5.8e-7699.31Show/hide
Query:  MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM
        MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSS HDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM
Subjt:  MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM

Query:  AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
        AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
Subjt:  AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD

XP_022984157.1 uncharacterized protein LOC111482570 isoform X2 [Cucurbita maxima]6.9e-77100Show/hide
Query:  MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM
        MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM
Subjt:  MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM

Query:  AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
        AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
Subjt:  AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD

XP_023552104.1 uncharacterized protein LOC111809873 isoform X1 [Cucurbita pepo subsp. pepo]4.5e-7698.62Show/hide
Query:  MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM
        MASSGGF+LICMLHSLIALTCGALMMFYSHEV+VFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM
Subjt:  MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM

Query:  AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
        AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
Subjt:  AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD

XP_038875201.1 uncharacterized protein LOC120067716 [Benincasa hispida]1.2e-7397.2Show/hide
Query:  SSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAI
        +S GFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAI
Subjt:  SSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAI

Query:  WRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
        WRVYFERKLEDLA DWPRQVVGDVTLALSWVFFLVYSWREKYD
Subjt:  WRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD

TrEMBL top hitse value%identityAlignment
A0A1S3C293 uncharacterized protein LOC1034960847.7e-7496.5Show/hide
Query:  SSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAI
        +S GF LICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAI
Subjt:  SSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAI

Query:  WRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
        WRVYFERKLEDLA+DWPRQVVGDVTLALSWVFFLVYSWREKYD
Subjt:  WRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD

A0A6J1CPH9 uncharacterized protein LOC1110129273.2e-7295.07Show/hide
Query:  SGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIW
        S GFLLICMLHSLIALTCGALMMFYSHEV+VFGHG ETAIKLQGSSPHDQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDREFQ+FFAKGCVLLHLAMAIW
Subjt:  SGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIW

Query:  RVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
        RVYFERKLEDLA+DWPRQVVGD+TLALSWVFFLVYSWREKYD
Subjt:  RVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD

A0A6J1E545 uncharacterized protein LOC111430823 isoform X22.8e-7699.31Show/hide
Query:  MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM
        MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSS HDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM
Subjt:  MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM

Query:  AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
        AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
Subjt:  AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD

A0A6J1FMS5 uncharacterized protein LOC1114468811.1e-7295.1Show/hide
Query:  SSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAI
        +S GFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSP DQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDR+FQSFFAKGCVLLHLAMAI
Subjt:  SSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAI

Query:  WRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
        WRVYFERKLEDLA+DWPRQVVGDVTLALSWVFFL+YSWREKYD
Subjt:  WRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD

A0A6J1J9R2 uncharacterized protein LOC111482570 isoform X23.3e-77100Show/hide
Query:  MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM
        MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM
Subjt:  MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM

Query:  AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
        AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
Subjt:  AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G53035.1 unknown protein1.1e-5166.19Show/hide
Query:  FLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVY
        F +IC+LHS+IALT G LMMFY+ +  +FG G E A KL+GS+PHD+LLI+ S SFSGLLLF +G +LFMV+FVKD+EF SFFA G V+L++ MA+WRV 
Subjt:  FLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVY

Query:  FERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
        FE K+EDLA +WP+Q +GD+ LA+SWVFFLVYSWREKYD
Subjt:  FERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD

AT3G15358.1 unknown protein2.6e-5064.75Show/hide
Query:  FLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVY
        F +IC+LHS+IALT G LMMFY+ +  +FGHG + A KL+GS+PHD+ LI+ S SFSGLLLF +G +LFMV+FVKDREF SFFA G V+L++ MA+WRV 
Subjt:  FLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVY

Query:  FERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
        FE K+EDLA + P+Q +GD+ LA+SWVFFLVY+WREKYD
Subjt:  FERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCATCTGGGGGGTTTTTGTTAATCTGTATGCTTCATTCTCTGATTGCTTTAACTTGTGGAGCGTTAATGATGTTTTACTCCCACGAGGTCTATGTGTTTGGCCA
TGGCCCTGAAACAGCGATCAAGCTGCAGGGATCTAGCCCCCACGATCAGCTTCTGATAAGGACATCTGATTCCTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTTCTTT
TATTCATGGTGGCATTTGTCAAAGATAGAGAATTTCAAAGCTTCTTTGCTAAAGGATGCGTGTTGCTTCACCTTGCCATGGCCATATGGAGAGTTTATTTCGAGAGGAAG
CTTGAGGATCTCGCCCAAGATTGGCCTCGACAGGTCGTTGGGGATGTTACATTGGCATTGTCATGGGTCTTCTTTCTTGTGTATTCATGGAGAGAAAAGTACGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCATCTGGGGGGTTTTTGTTAATCTGTATGCTTCATTCTCTGATTGCTTTAACTTGTGGAGCGTTAATGATGTTTTACTCCCACGAGGTCTATGTGTTTGGCCA
TGGCCCTGAAACAGCGATCAAGCTGCAGGGATCTAGCCCCCACGATCAGCTTCTGATAAGGACATCTGATTCCTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTTCTTT
TATTCATGGTGGCATTTGTCAAAGATAGAGAATTTCAAAGCTTCTTTGCTAAAGGATGCGTGTTGCTTCACCTTGCCATGGCCATATGGAGAGTTTATTTCGAGAGGAAG
CTTGAGGATCTCGCCCAAGATTGGCCTCGACAGGTCGTTGGGGATGTTACATTGGCATTGTCATGGGTCTTCTTTCTTGTGTATTCATGGAGAGAAAAGTACGATTAA
Protein sequenceShow/hide protein sequence
MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERK
LEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD