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Carg11345 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11345
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr16:2334752..2336358
RNA-Seq ExpressionCarg11345
SyntenyCarg11345
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011154.1 GDSL esterase/lipase 3, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-0643.64Show/hide
Query:  GKLGRESPKRTISASGELELLQM------------------------GKLRRESSKRTISASGELGLWYQNQTLGIVLVST---------LVRSHIGWRR
        GK  RESPKRTISASG L  LQM                        GKL  ES K+TISASG L L        I   ++         +VRSHI WR 
Subjt:  GKLGRESPKRTISASGELELLQM------------------------GKLRRESSKRTISASGELGLWYQNQTLGIVLVST---------LVRSHIGWRR

Query:  ERNIPYKGVK
        ER+IPYKG K
Subjt:  ERNIPYKGVK

KAG7015035.1 hypothetical protein SDJN02_22666, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-56100Show/hide
Query:  MVLLTGLDIFKLDCFPYVVVCVRMDDLNLDVKEGKLGRESPKRTISASGELELLQMGKLRRESSKRTISASGELGLWYQNQTLGIVLVSTLVRSHIGWRR
        MVLLTGLDIFKLDCFPYVVVCVRMDDLNLDVKEGKLGRESPKRTISASGELELLQMGKLRRESSKRTISASGELGLWYQNQTLGIVLVSTLVRSHIGWRR
Subjt:  MVLLTGLDIFKLDCFPYVVVCVRMDDLNLDVKEGKLGRESPKRTISASGELELLQMGKLRRESSKRTISASGELGLWYQNQTLGIVLVSTLVRSHIGWRR

Query:  ERNIPYKGVKTYP
        ERNIPYKGVKTYP
Subjt:  ERNIPYKGVKTYP

KAG7020820.1 DNA-directed RNA polymerase 3, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]6.5e-0653.85Show/hide
Query:  MGKLRRESSKRTISASGELGLWYQNQTLGIVLVST---------LVRSHIGWRRERNIPYKGVKT
        +GK  RES KRTIS SGELGL      LG    ++         +VRSHIGWR ERNI YKGV+T
Subjt:  MGKLRRESSKRTISASGELGLWYQNQTLGIVLVST---------LVRSHIGWRRERNIPYKGVKT

KAG7033927.1 Cysteine-rich receptor-like protein kinase 10, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-0444.44Show/hide
Query:  EGKLGRESPKRTISASGELELLQMGKLRRESSKRTISASGELGLWYQNQTLGIVLVSTLVRSHIGWRRERNIPYKGVKTYP
        EGK  RE+PKRTIS S  L LLQM  L  ++ +      G L  W             +VRSHIGWR++++IPYK V+T P
Subjt:  EGKLGRESPKRTISASGELELLQMGKLRRESSKRTISASGELGLWYQNQTLGIVLVSTLVRSHIGWRRERNIPYKGVKTYP

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTTCTTACCGGCCTTGACATCTTTAAGCTTGATTGTTTCCCATATGTGGTGGTTTGTGTTCGTATGGATGATTTGAATCTGGATGTGAAGGAGGGAAAGCTCGG
AAGGGAAAGCCCCAAGAGGACAATATCTGCTAGTGGTGAGCTTGAGTTGTTACAAATGGGGAAGCTCAGAAGGGAAAGCTCAAAGAGGACAATATCTGCTAGCGGTGAGC
TTGGGTTGTGGTATCAGAACCAGACATTGGGCATTGTGCTAGTGAGTACGCTGGTGAGATCCCACATCGGTTGGAGAAGGGAACGAAACATTCCTTATAAGGGTGTGAAA
ACTTATCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCTTCTTACCGGCCTTGACATCTTTAAGCTTGATTGTTTCCCATATGTGGTGGTTTGTGTTCGTATGGATGATTTGAATCTGGATGTGAAGGAGGGAAAGCTCGG
AAGGGAAAGCCCCAAGAGGACAATATCTGCTAGTGGTGAGCTTGAGTTGTTACAAATGGGGAAGCTCAGAAGGGAAAGCTCAAAGAGGACAATATCTGCTAGCGGTGAGC
TTGGGTTGTGGTATCAGAACCAGACATTGGGCATTGTGCTAGTGAGTACGCTGGTGAGATCCCACATCGGTTGGAGAAGGGAACGAAACATTCCTTATAAGGGTGTGAAA
ACTTATCCCTAA
Protein sequenceShow/hide protein sequence
MVLLTGLDIFKLDCFPYVVVCVRMDDLNLDVKEGKLGRESPKRTISASGELELLQMGKLRRESSKRTISASGELGLWYQNQTLGIVLVSTLVRSHIGWRRERNIPYKGVK
TYP