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Carg11362 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11362
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUbiquitin domain-containing protein
Genome locationCarg_Chr16:2425131..2428832
RNA-Seq ExpressionCarg11362
SyntenyCarg11362
Gene Ontology termsNA
InterPro domainsIPR032752 - DC-UbP/UBTD2, N-terminal domain
IPR038169 - DC-UbP/UBTD2, N-terminal domain superfamily
IPR039869 - Ubiquitin domain-containing protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015051.1 Ubiquitin domain-containing protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-56100Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVL
        MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVL
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVL

Query:  SEPTNLIRDSS
        SEPTNLIRDSS
Subjt:  SEPTNLIRDSS

XP_022931411.1 ubiquitin domain-containing protein 2-like [Cucurbita moschata]2.8e-5496.52Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
        MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY    EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
        NYVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

XP_022984742.1 ubiquitin domain-containing protein 2-like [Cucurbita maxima]1.2e-5293.91Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
        MGCAGSSQTNG+GSIKKIRKPKSWKHPQPITR QLVQLREEFWDTAPHY    EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERG KYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
        NYVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

XP_023552879.1 ubiquitin domain-containing protein 2-like [Cucurbita pepo subsp. pepo]1.8e-5395.65Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
        MGCAGSSQTNGDGSIKKI KPKSWKHPQPITRSQLVQLREEFWDTAPHY    EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
        NYVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

XP_038882682.1 ubiquitin domain-containing protein 2-like [Benincasa hispida]1.8e-5393.91Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
        MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQL+QLR+EFWDTAPHY    EIWDALRAAAEAELSLAQAIIDSAGVI+QNADLTICYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
        NYVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

TrEMBL top hitse value%identityAlignment
A0A0A0KVJ9 UBD domain-containing protein3.7e-5291.3Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
        MGCAGSSQT  DGSIKKIRKPKSWKHPQPITRSQL QLR+EFWDTAPHY    EIWDALRAAAEAELSLAQAI+DSAGVI+QNADLTICYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
        NYVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

A0A6J1ETK8 ubiquitin domain-containing protein 2-like1.4e-5496.52Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
        MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY    EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
        NYVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

A0A6J1FQA3 ubiquitin domain-containing protein 1-like3.1e-5189.57Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
        MGC GSSQTNGDGS KKIRKPK WKHPQPITRSQL QLR+EFWDTAPHY    EIWDALRAAAEAELSLAQAIIDSAGVI+QNADLT+CYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
         YVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

A0A6J1J306 ubiquitin domain-containing protein 2-like5.7e-5393.91Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
        MGCAGSSQTNG+GSIKKIRKPKSWKHPQPITR QLVQLREEFWDTAPHY    EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERG KYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
        NYVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

A0A6J1J725 ubiquitin domain-containing protein 1-like isoform X23.1e-5189.57Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
        MGC GSSQTNGDGS KKIRKPK WKHPQPITRSQL QLR+EFWDTAPHY    EIWDALRAAAEAELSLAQAIIDSAGVI+QNADLT+CYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
         YVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

SwissProt top hitse value%identityAlignment
Q4V8W7 Ubiquitin domain-containing protein 16.8e-1945.45Show/hide
Query:  GCAG--SSQTNGDGS------------IKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEA----ELSLAQAIIDSAGVIIQN
        GC G   ++T G GS            +KK  KPK WK   P+T  QL   R+EFWDTAP +    EIWDAL+AAA A    +  LAQAI+D A + + +
Subjt:  GCAG--SSQTNGDGS------------IKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEA----ELSLAQAIIDSAGVIIQN

Query:  ADLTICYDERGAKYELPNYVLSEPTNLIRDSS
          LT CYDE G +Y+LP Y L+ P NLI + S
Subjt:  ADLTICYDERGAKYELPNYVLSEPTNLIRDSS

Q5EAE3 Ubiquitin domain-containing protein 21.2e-1846.96Show/hide
Query:  GSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEA----ELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
        G+    G     K  KPK WK   P+T  QL   R+EFWDTAP +    EIWDAL+AAA A    +  LAQAIID A + + +  LT CYDE G +Y+LP
Subjt:  GSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEA----ELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
         Y L+ P N+I + S
Subjt:  NYVLSEPTNLIRDSS

Q640W6 Ubiquitin domain-containing protein 18.9e-1946.4Show/hide
Query:  AGSSQTNGDGS---------IKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEA----ELSLAQAIIDSAGVIIQNADLTICY
        +GS   N DG+         +KK  KPK WK   P+T  QL   R+EFWDTAP +    EIWDAL+AAA A    +  LAQAIID A + + +  LT CY
Subjt:  AGSSQTNGDGS---------IKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEA----ELSLAQAIIDSAGVIIQNADLTICY

Query:  DERGAKYELPNYVLSEPTNLIRDSS
        DE G +Y+LP Y L+ P N+I + S
Subjt:  DERGAKYELPNYVLSEPTNLIRDSS

Q6DG43 Ubiquitin domain-containing protein 21.4e-1946.77Show/hide
Query:  AGSSQTNGDGS--------IKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEA----ELSLAQAIIDSAGVIIQNADLTICYD
        +GS   N DG+          K  KPK WK   P+T  QL   R+EFWDTAP +    EIWDAL+AAA+A    +  LAQAIID A + + +  LT CYD
Subjt:  AGSSQTNGDGS--------IKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEA----ELSLAQAIIDSAGVIIQNADLTICYD

Query:  ERGAKYELPNYVLSEPTNLIRDSS
        E G +Y+LP Y LS P N+I + S
Subjt:  ERGAKYELPNYVLSEPTNLIRDSS

Q6PGH0 Ubiquitin domain-containing protein 25.2e-1946.4Show/hide
Query:  AGSSQTNGDGS---------IKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEA----ELSLAQAIIDSAGVIIQNADLTICY
        +GS   N DG+         +KK  KPK WK   P+T  QL   R+EFWDTAP +    EIWDAL+AAA A    +  LAQAIID A + + +  LT CY
Subjt:  AGSSQTNGDGS---------IKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEA----ELSLAQAIIDSAGVIIQNADLTICY

Query:  DERGAKYELPNYVLSEPTNLIRDSS
        DE G +Y+LP Y L+ P N+I + S
Subjt:  DERGAKYELPNYVLSEPTNLIRDSS

Arabidopsis top hitse value%identityAlignment
AT1G16960.1 Ubiquitin domain-containing protein7.2e-4069.64Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEA-ELSLAQAIIDSAGVIIQNADLTICYDERGAKYEL
        MGC+ SS+T  +G  +KIR+PK+WKHPQPI+R +L Q+REEFWDTAPHY    EIWDALRAAAE  +LSLAQ I++SAGVI+QN DLTICYDE+G+KYEL
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEA-ELSLAQAIIDSAGVIIQNADLTICYDERGAKYEL

Query:  PNYVLSEPTNLI
        P YVL +P+NLI
Subjt:  PNYVLSEPTNLI

AT1G53400.1 Ubiquitin domain-containing protein9.4e-4879.09Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
        MGCAGS+Q+  DGS+KKIRKPK WKH QPIT+++L++LREEFWDTAPHY    EIWDALRAAAEA++SLAQAI+DSAGVI+QN DLT+CYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP

Query:  NYVLSEPTNL
         YVLSEPTNL
Subjt:  NYVLSEPTNL

AT5G45740.1 Ubiquitin domain-containing protein1.0e-4169.57Show/hide
Query:  MGCAGSSQTNGDGSI--KKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYE
        MGC GSSQ   +G    KKI KPK W H +PITR+QL  +REEFWDT+PHY    EIW+ALRAAAEA+L LAQ I+DSAGVI+QN DLT+C+DERGA+YE
Subjt:  MGCAGSSQTNGDGSI--KKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHY----EIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYE

Query:  LPNYVLSEPTNLIRD
        LP YVLSEPTNLIR+
Subjt:  LPNYVLSEPTNLIRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTGTGCTGGATCGTCGCAGACCAACGGGGACGGTTCCATAAAGAAAATACGCAAGCCAAAATCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTTGTGCA
ACTGCGGGAGGAGTTCTGGGACACTGCACCTCACTATGAGATTTGGGACGCACTACGAGCAGCTGCCGAAGCCGAGCTTTCCCTTGCGCAAGCCATCATAGACAGTGCAG
GGGTAATCATCCAAAATGCAGATTTGACAATCTGTTACGACGAGAGAGGCGCAAAATATGAACTACCCAACTATGTTTTGAGTGAGCCAACCAATTTGATTCGTGACAGT
TCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTGTGCTGGATCGTCGCAGACCAACGGGGACGGTTCCATAAAGAAAATACGCAAGCCAAAATCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTTGTGCA
ACTGCGGGAGGAGTTCTGGGACACTGCACCTCACTATGAGATTTGGGACGCACTACGAGCAGCTGCCGAAGCCGAGCTTTCCCTTGCGCAAGCCATCATAGACAGTGCAG
GGGTAATCATCCAAAATGCAGATTTGACAATCTGTTACGACGAGAGAGGCGCAAAATATGAACTACCCAACTATGTTTTGAGTGAGCCAACCAATTTGATTCGTGACAGT
TCATAAAGAGGTAACCATAACTTCGTTTCTGCTCTAGCTGAAATCACACAGGTCTGAATAATGCTTGCTTTTGAAAGGTTTCATTTTGGTCCTTAATACAAACATACAT
Protein sequenceShow/hide protein sequence
MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNLIRDS
S