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Carg11365 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11365
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr16:2435159..2435500
RNA-Seq ExpressionCarg11365
SyntenyCarg11365
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577032.1 hypothetical protein SDJN03_24606, partial [Cucurbita argyrosperma subsp. sororia]2.1e-4193.27Show/hide
Query:  MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL
        MPTSAD  SSSSSSS SSSSS+ DCATPKSLSVQLVSK ASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSK ENAKKAWRKL
Subjt:  MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL

Query:  ITCF
        ITCF
Subjt:  ITCF

KAG7015053.1 hypothetical protein SDJN02_22686, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-50100Show/hide
Query:  MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL
        MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL
Subjt:  MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL

Query:  ITCFGVSALTISL
        ITCFGVSALTISL
Subjt:  ITCFGVSALTISL

XP_022931413.1 uncharacterized protein LOC111437603 [Cucurbita moschata]1.3e-46100Show/hide
Query:  MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL
        MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL
Subjt:  MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL

Query:  ITCFG
        ITCFG
Subjt:  ITCFG

XP_023552146.1 uncharacterized protein LOC111809909 isoform X1 [Cucurbita pepo subsp. pepo]1.3e-4395.33Show/hide
Query:  MPTSAD--SSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWR
        MPTSAD  SSSSSSSSSSSSSSSFLDCATP+SLSVQLVSK ASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSP DVCSGYEVLSKLENAKKAWR
Subjt:  MPTSAD--SSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWR

Query:  KLITCFG
        KLITCFG
Subjt:  KLITCFG

XP_023552147.1 protein DSE2-like isoform X2 [Cucurbita pepo subsp. pepo]1.3e-4395.33Show/hide
Query:  MPTSAD--SSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWR
        MPTSAD  SSSSSSSSSSSSSSSFLDCATP+SLSVQLVSK ASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSP DVCSGYEVLSKLENAKKAWR
Subjt:  MPTSAD--SSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWR

Query:  KLITCFG
        KLITCFG
Subjt:  KLITCFG

TrEMBL top hitse value%identityAlignment
A0A6J1CMP9 uncharacterized protein LOC1110128782.1e-3482.29Show/hide
Query:  SSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKLITCF
        S++SSSSSSSSSSFL+C +P S SVQLVSK  SDRLLGKFFDAS+FDFDYEQSSLWSPPIPRRVFLDSPA+VCSGYEV SKL++AKKAWRK + CF
Subjt:  SSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKLITCF

A0A6J1EYJ9 uncharacterized protein LOC1114376036.3e-47100Show/hide
Query:  MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL
        MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL
Subjt:  MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL

Query:  ITCFG
        ITCFG
Subjt:  ITCFG

A0A6J1J4Z5 uncharacterized protein LOC111482673 isoform X24.3e-4088.57Show/hide
Query:  MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL
        MPTSAD     SSSSSSSSSSFLDCATP+SLSVQLVSK ASDRLL KFFDASKF+FDYEQSSLWSPPIPRRVFLDSP DVCSGYEVLSKLEN KKAWRK 
Subjt:  MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL

Query:  ITCFG
        ITCFG
Subjt:  ITCFG

A0A6J1J7J0 uncharacterized protein LOC1114820712.6e-3279.79Show/hide
Query:  SSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKLITCF
        S+ SS+ SSS F++CATP   SVQLVSK  SDRLLGKFFDAS+FDFDYEQSSLWSPPIPRRVFLDSP DVCSGYEVLSKLE AK AWRK + CF
Subjt:  SSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKLITCF

A0A6J1J8D3 uncharacterized protein LOC111482673 isoform X13.3e-4086.92Show/hide
Query:  MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL
        MPTSAD     SSSSSSSSSSFLDCATP+SLSVQLVSK ASDRLL KFFDASKF+FDYEQSSLWSPPIPRRVFLDSP DVCSGYEVLSKLEN KKAWRK 
Subjt:  MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL

Query:  ITCFGVS
        ITCFG +
Subjt:  ITCFGVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G15140.1 unknown protein1.2e-0539.19Show/hide
Query:  VQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVF----LDSPADVCSGYEVLSKLENAKKAWRKLIT
        V+ +  +    LL KF D S F FDY QSSLWSP +PR       LDS + VC   + L + +  KK   K+++
Subjt:  VQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVF----LDSPADVCSGYEVLSKLENAKKAWRKLIT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACCTCTGCCGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTCTTGATTGCGCTACTCCGAAGAGTCTGAGCGTTCAACTCGTGTC
TAAATTGGCGTCGGATCGCCTTCTCGGCAAGTTCTTCGATGCCTCGAAATTCGACTTCGATTACGAACAGAGTAGTTTGTGGTCTCCGCCGATTCCGCGGCGAGTGTTTC
TGGATTCGCCGGCTGATGTTTGCTCTGGTTATGAGGTTCTCTCGAAGCTTGAGAATGCGAAGAAGGCATGGAGGAAACTTATAACTTGTTTCGGAGTAAGTGCTCTCACG
ATCTCATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAACCTCTGCCGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTCTTGATTGCGCTACTCCGAAGAGTCTGAGCGTTCAACTCGTGTC
TAAATTGGCGTCGGATCGCCTTCTCGGCAAGTTCTTCGATGCCTCGAAATTCGACTTCGATTACGAACAGAGTAGTTTGTGGTCTCCGCCGATTCCGCGGCGAGTGTTTC
TGGATTCGCCGGCTGATGTTTGCTCTGGTTATGAGGTTCTCTCGAAGCTTGAGAATGCGAAGAAGGCATGGAGGAAACTTATAACTTGTTTCGGAGTAAGTGCTCTCACG
ATCTCATTGTGA
Protein sequenceShow/hide protein sequence
MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKLITCFGVSALT
ISL