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Carg11398 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11398
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr16:2687333..2687726
RNA-Seq ExpressionCarg11398
SyntenyCarg11398
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577078.1 DExH-box ATP-dependent RNA helicase DExH6, partial [Cucurbita argyrosperma subsp. sororia]3.9e-3994.74Show/hide
Query:  LCSLTSNDRRNFDTRLLLEMSRHGSENGTQLLLEMKQASSKSIHYSLLSATDVSIIHTRLDSHLPEYSIQSGSFRNIVLGFSSLEYDIIINERIY
        L  LTSND RNFD RLLLEMSRH SENGTQLLLEMKQASSKSIHYSLLSATDVSIIHTRLDSHLPEYSIQSGSFRNIVLGFSSLEYDIIINERIY
Subjt:  LCSLTSNDRRNFDTRLLLEMSRHGSENGTQLLLEMKQASSKSIHYSLLSATDVSIIHTRLDSHLPEYSIQSGSFRNIVLGFSSLEYDIIINERIY
KAG7015086.1 hypothetical protein SDJN02_22719, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-44100Show/hide
Query:  MSLLCSLTSNDRRNFDTRLLLEMSRHGSENGTQLLLEMKQASSKSIHYSLLSATDVSIIHTRLDSHLPEYSIQSGSFRNIVLGFSSLEYDIIINERIY
        MSLLCSLTSNDRRNFDTRLLLEMSRHGSENGTQLLLEMKQASSKSIHYSLLSATDVSIIHTRLDSHLPEYSIQSGSFRNIVLGFSSLEYDIIINERIY
Subjt:  MSLLCSLTSNDRRNFDTRLLLEMSRHGSENGTQLLLEMKQASSKSIHYSLLSATDVSIIHTRLDSHLPEYSIQSGSFRNIVLGFSSLEYDIIINERIY
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCTTCTCTGCAGTCTAACGTCCAATGATAGGCGAAACTTTGACACTCGGTTATTACTCGAGATGTCTAGACACGGTTCAGAGAATGGAACTCAGCTGCTTCTGGA
GATGAAACAAGCATCTTCCAAATCCATCCATTATAGTTTGCTTTCAGCTACAGATGTAAGTATAATACACACCAGGCTTGATTCTCACCTTCCCGAGTACTCGATACAAT
CAGGTTCTTTCAGGAATATCGTTCTCGGTTTCAGCTCATTAGAGTATGATATCATTATCAATGAGAGGATATAC
mRNA sequenceShow/hide mRNA sequence
ATGTCGCTTCTCTGCAGTCTAACGTCCAATGATAGGCGAAACTTTGACACTCGGTTATTACTCGAGATGTCTAGACACGGTTCAGAGAATGGAACTCAGCTGCTTCTGGA
GATGAAACAAGCATCTTCCAAATCCATCCATTATAGTTTGCTTTCAGCTACAGATGTAAGTATAATACACACCAGGCTTGATTCTCACCTTCCCGAGTACTCGATACAAT
CAGGTTCTTTCAGGAATATCGTTCTCGGTTTCAGCTCATTAGAGTATGATATCATTATCAATGAGAGGATATAC
Protein sequenceShow/hide protein sequence
MSLLCSLTSNDRRNFDTRLLLEMSRHGSENGTQLLLEMKQASSKSIHYSLLSATDVSIIHTRLDSHLPEYSIQSGSFRNIVLGFSSLEYDIIINERIY