CuGenDBv2

Gene ID	Carg11422
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	embryo defective 3006
Genome location	Carg_Chr16:2891484..2895263
RNA-Seq Expression	Carg11422
Synteny	Carg11422
Gene Ontology terms	GO:0007049 - cell cycle (biological process) GO:0007059 - chromosome segregation (biological process) GO:0051301 - cell division (biological process) GO:0000818 - nuclear MIS12/MIND complex (cellular component)
InterPro domains	IPR007128 - Nuclear MIS12/MIND complex subunit PMF1/Nnf1

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7015109.1 hypothetical protein SDJN02_22742 [Cucurbita argyrosperma subsp. argyrosperma]

1.6e-97

100

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Query:  MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQ
        MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQ
Subjt:  MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQ

Query:  DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTFDT
        DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTFDT
Subjt:  DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTFDT

XP_008451872.1 PREDICTED: uncharacterized protein LOC103493030 [Cucumis melo]

2.0e-76

84.15

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Query:  MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQ
        M KKHEI TPV+S QIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQ+YLHRLFIQVITSLHGNIEDEFESLCVET     QVGLVLDNVEQLLEEQ
Subjt:  MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQ

Query:  DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRT
        DLDPLYSKKTNI+EI+N+LSM K  EIQHLKDMLKTAEEQNR +QGRID+LRKGVQDAS M DAV+KLR+ CR+Y  DGV+ T
Subjt:  DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRT

XP_022931290.1 uncharacterized protein LOC111437518 isoform X1 [Cucurbita moschata]

4.4e-92

97.33

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Query:  MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQ
        MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVET     QVGLVLDNVEQLLEEQ
Subjt:  MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQ

Query:  DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTFDT
        DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTFDT
Subjt:  DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTFDT

XP_022985332.1 uncharacterized protein LOC111483373 isoform X1 [Cucurbita maxima]

8.3e-91

96.26

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Query:  MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQ
        MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSR EFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVET     +VGLVLDNVEQLLEEQ
Subjt:  MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQ

Query:  DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTFDT
        DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTFDT
Subjt:  DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTFDT

XP_038876216.1 uncharacterized protein LOC120068468 [Benincasa hispida]

1.9e-79

86.63

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Query:  MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQ
        M+KK EI TPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFS+FT AEQEYLHRLFIQVITSLHGNIEDEFESLCVET     QVGLVLDNVEQLLEEQ
Subjt:  MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQ

Query:  DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTFDT
        +LDPLYSKKTNIMEIAN+LS+TKKNEIQHLKDMLKTAEEQNR +QGRID+LRKGVQDAS M DAV+KLR RCRAY  DGV+  TFDT
Subjt:  DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTFDT

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BTB0 uncharacterized protein LOC103493030

9.6e-77

84.15

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Query:  MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQ
        M KKHEI TPV+S QIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQ+YLHRLFIQVITSLHGNIEDEFESLCVET     QVGLVLDNVEQLLEEQ
Subjt:  MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQ

Query:  DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRT
        DLDPLYSKKTNI+EI+N+LSM K  EIQHLKDMLKTAEEQNR +QGRID+LRKGVQDAS M DAV+KLR+ CR+Y  DGV+ T
Subjt:  DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRT

A0A5A7TAS4 Uncharacterized protein

9.6e-77

84.15

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Query:  MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQ
        M KKHEI TPV+S QIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQ+YLHRLFIQVITSLHGNIEDEFESLCVET     QVGLVLDNVEQLLEEQ
Subjt:  MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQ

Query:  DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRT
        DLDPLYSKKTNI+EI+N+LSM K  EIQHLKDMLKTAEEQNR +QGRID+LRKGVQDAS M DAV+KLR+ CR+Y  DGV+ T
Subjt:  DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRT

A0A6J1C7G2 uncharacterized protein LOC111008110

1.6e-76

83.61

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Query:  MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQ
        M+KKHE+ TP SSS +DLKKSFKLAVRSLLTSCSREEFRECF RFT AEQEYLHRLFIQVITSLHGNIEDEFESLC+ET     QVG +LDNVEQLLEEQ
Subjt:  MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQ

Query:  DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRT
         LDPLYSKKTNIM+IANYLSMTKKNEIQ LKDMLKTAEEQN+HVQ RID+LRKGVQD S   DAVEKL NRCRAYA DGV+ T
Subjt:  DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRT

A0A6J1EZ15 uncharacterized protein LOC111437518 isoform X1

2.1e-92

97.33

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Query:  MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQ
        MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVET     QVGLVLDNVEQLLEEQ
Subjt:  MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQ

Query:  DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTFDT
        DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTFDT
Subjt:  DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTFDT

A0A6J1J4K9 uncharacterized protein LOC111483373 isoform X1

4.0e-91

96.26

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Query:  MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQ
        MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSR EFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVET     +VGLVLDNVEQLLEEQ
Subjt:  MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQ

Query:  DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTFDT
        DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTFDT
Subjt:  DLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTFDT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G19350.1 embryo defective 3006

1.1e-35

49.69

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Query:  SSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQDLDPLYSKKTNI
        S +  LKKSFK  +R LLT+CS+++F + FS+F+ AEQE L +L+ +V+ +LH  IE+EF+  C ET     QVG +LD VE+L+EEQ LDPL+S KT++
Subjt:  SSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQDLDPLYSKKTNI

Query:  MEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAY
        M IA  L+ +KKNEIQ L  +L+ AEEQNR  + RI +L+K  QD S   D +EKL      Y
Subjt:  MEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAY

Sequences

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CDS sequence

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ATGGATAAGAAGCACGAGATTGGTACGCCGGTGAGCTCCAGCCAGATCGATCTGAAAAAGTCATTCAAGCTTGCTGTTCGTTCTCTCCTCACTTCCTGTTCCAGGGAGGA
GTTCCGGGAATGCTTTTCGAGATTTACGACTGCGGAGCAAGAATATCTTCATCGTCTCTTCATTCAGGTTATAACTTCTTTGCATGGAAACATAGAGGACGAGTTTGAGT
CATTATGTGTTGAAACACAGTTTTGCTTTATGCAGGTGGGACTTGTACTTGATAATGTTGAACAACTTTTGGAAGAGCAAGATCTAGACCCATTGTATTCCAAAAAGACA
AACATAATGGAAATTGCCAATTATCTATCCATGACAAAGAAGAATGAGATCCAACACTTGAAGGACATGCTAAAAACGGCTGAGGAACAGAACCGGCATGTTCAAGGCCG
TATTGATATCCTAAGGAAAGGAGTGCAAGATGCCTCGGCCATGGAAGATGCTGTTGAAAAGCTAAGAAACAGATGCAGAGCTTATGCAGATGATGGCGTTAGCAGAACGA
CCTTCGATACTTAA

mRNA sequence

Show/hide mRNA sequence

TTTATTTTGAAATATTGCATAATTCCCCCAGGCTTTCTAGTCCGAAAATCTCCCGCTCGCTAACTAGTTCAGATTTCTCGGACTTCGATTTCTTCCCTCACTTGCAGTTC
GTCACTTCGCCGTCGCCGCCGCCGCGACTCCACGGCGTTAACTGGAGTCGACTCACCGACTCGTTTCACTGGCAGCAGTTTTCTAATTTATTCCATCTGCTGCGTTGCTG
TCGCGCCATTTCCGCATCGTTTGATTTCAGGCAGAATTTAGCAAGACAGGGTTGGGGATCGTAGTGGATACAAGTTTTGAAAATGGATAAGAAGCACGAGATTGGTACGC
CGGTGAGCTCCAGCCAGATCGATCTGAAAAAGTCATTCAAGCTTGCTGTTCGTTCTCTCCTCACTTCCTGTTCCAGGGAGGAGTTCCGGGAATGCTTTTCGAGATTTACG
ACTGCGGAGCAAGAATATCTTCATCGTCTCTTCATTCAGGTTATAACTTCTTTGCATGGAAACATAGAGGACGAGTTTGAGTCATTATGTGTTGAAACACAGTTTTGCTT
TATGCAGGTGGGACTTGTACTTGATAATGTTGAACAACTTTTGGAAGAGCAAGATCTAGACCCATTGTATTCCAAAAAGACAAACATAATGGAAATTGCCAATTATCTAT
CCATGACAAAGAAGAATGAGATCCAACACTTGAAGGACATGCTAAAAACGGCTGAGGAACAGAACCGGCATGTTCAAGGCCGTATTGATATCCTAAGGAAAGGAGTGCAA
GATGCCTCGGCCATGGAAGATGCTGTTGAAAAGCTAAGAAACAGATGCAGAGCTTATGCAGATGATGGCGTTAGCAGAACGACCTTCGATACTTAACCGATGCTCCTCCG
ACTCGCTGTTGCCATCCCATGTGTTTACATCCAAGAATTGCTGTTAAATAACCAGGTCAGTATTTAATCTAGTACTAGATTTCACTTGGGTAGTTTTATGTGCCAATTTC
TTCAGCTTAGCTCAAGCTTTATATTTATTATTTATGTCACGTCTGCAATTTTACATGTTTTATTCTGTATAACTCATACACTCTGTAT

Protein sequence

Show/hide protein sequence

MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQDLDPLYSKKT
NIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTFDT

Carg11422 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome