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Carg11427 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11427
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProfilin
Genome locationCarg_Chr16:2919051..2921899
RNA-Seq ExpressionCarg11427
SyntenyCarg11427
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0005856 - cytoskeleton (cellular component)
GO:0003779 - actin binding (molecular function)
InterPro domainsIPR005455 - Profilin
IPR036140 - Profilin superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577112.1 hypothetical protein SDJN03_24686, partial [Cucurbita argyrosperma subsp. sororia]6.3e-78100Show/hide
Query:  MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTI
        MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTI
Subjt:  MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTI

Query:  KHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKNL
        KHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKNL
Subjt:  KHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKNL

XP_008451862.1 PREDICTED: uncharacterized protein LOC103493024 [Cucumis melo]1.9e-7494.56Show/hide
Query:  MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTI
        MDWAFV KAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQF+DFIKRDKPQNESFSIG NQYIMTSVHENWFCARCMNTI
Subjt:  MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTI

Query:  KHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKNL
        KHAGEGV+IVQTTAFIL+AMYDGSIAAASRAMA+ADQLSW L RKNL
Subjt:  KHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKNL

XP_011653239.1 uncharacterized protein LOC105435190 [Cucumis sativus]5.5e-7494.52Show/hide
Query:  MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTI
        MDWAFV KAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQF+DFIKRDKPQNESFSIG NQYIMTSVHENWFCARCMNTI
Subjt:  MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTI

Query:  KHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKN
        KHAGEGV+IVQTTAFIL+AMYDGSIAAASRAMA+ADQLSW L RKN
Subjt:  KHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKN

XP_022136632.1 uncharacterized protein LOC111008291 [Momordica charantia]4.2e-7494.56Show/hide
Query:  MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTI
        MDWAF  KAWDKWAS SIGTFGQPLKAA+LINYDPTGPSRLLSTIAEQEGIL+NPIELNQFIDFIKRDKPQ ESFSIGSNQYIMTSVHENWFCARCMNTI
Subjt:  MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTI

Query:  KHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKNL
        KHAGEGVVIVQT AFILVAMYDGSIAAASRAMA+ADQLSWQLGRKNL
Subjt:  KHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKNL

XP_038878184.1 uncharacterized protein LOC120070329 [Benincasa hispida]1.0e-7595.92Show/hide
Query:  MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTI
        M+WAFV K WDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQF+DFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTI
Subjt:  MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTI

Query:  KHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKNL
        KHAGEGV+IVQTTAFILVAMYDGSIAAASRAMA+ADQLSWQLGRKNL
Subjt:  KHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKNL

TrEMBL top hitse value%identityAlignment
A0A0A0KV40 Uncharacterized protein1.3e-6094.4Show/hide
Query:  GQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTIKHAGEGVVIVQTTAFILVAMY
        GQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQF+DFIKRDKPQNESFSIG NQYIMTSVHENWFCARCMNTIKHAGEGV+IVQTTAFIL+AMY
Subjt:  GQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTIKHAGEGVVIVQTTAFILVAMY

Query:  DGSIAAASRAMASADQLSWQLGRKN
        DGSIAAASRAMA+ADQLSW L RKN
Subjt:  DGSIAAASRAMASADQLSWQLGRKN

A0A1Q3AMV2 Profilin domain-containing protein1.4e-5972.11Show/hide
Query:  MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTI
        MDW FV +AW+KWAS ++G++G+PLKAALLINYDPTGPSRLLSTIAEQEGI  NPIEL++FIDFI R+KPQ ESF +G NQYI+TS+HE+WFCARC+NT 
Subjt:  MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTI

Query:  KHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKNL
        K AGEG +++QTTAF+LV +YDGSI +ASRAM +ADQ +WQL R+NL
Subjt:  KHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKNL

A0A1S3BTL7 uncharacterized protein LOC1034930249.2e-7594.56Show/hide
Query:  MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTI
        MDWAFV KAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQF+DFIKRDKPQNESFSIG NQYIMTSVHENWFCARCMNTI
Subjt:  MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTI

Query:  KHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKNL
        KHAGEGV+IVQTTAFIL+AMYDGSIAAASRAMA+ADQLSW L RKNL
Subjt:  KHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKNL

A0A498HNK1 Uncharacterized protein5.4e-5972.79Show/hide
Query:  MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTI
        MDW FVRKAWDKWAS +I +  +PLKAALLINYDPTGPSRLLSTIAE+EGI +NPIEL+QF+DFIK DK Q ESF IG+NQY++TS+H+NWFCARCMNT 
Subjt:  MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTI

Query:  KHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKNL
        KH+GEG +++QT AF+LV +YDGSI +ASRAMA+ DQ +WQL RKN+
Subjt:  KHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKNL

A0A6J1C603 uncharacterized protein LOC1110082912.1e-7494.56Show/hide
Query:  MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTI
        MDWAF  KAWDKWAS SIGTFGQPLKAA+LINYDPTGPSRLLSTIAEQEGIL+NPIELNQFIDFIKRDKPQ ESFSIGSNQYIMTSVHENWFCARCMNTI
Subjt:  MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTI

Query:  KHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKNL
        KHAGEGVVIVQT AFILVAMYDGSIAAASRAMA+ADQLSWQLGRKNL
Subjt:  KHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G19400.1 Profilin family protein2.4e-5163.27Show/hide
Query:  MDWAFVRKAWDKW-ASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNT
        MD AFV +AWDKW  +G++G+ G PLKAA+LINYDPTGPSRLLSTIA+QEGI + P++L QFIDF++      E+F +GSNQYI+TS+HENWF ARC+NT
Subjt:  MDWAFVRKAWDKW-ASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNT

Query:  IKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKN
         + AGEG +++QT  ++LVA+YDGSI +AS+AMA+ADQ + QL RKN
Subjt:  IKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKN

AT4G19410.2 Pectinacetylesterase family protein2.4e-5163.27Show/hide
Query:  MDWAFVRKAWDKW-ASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNT
        MD AFV +AWDKW  +G++G+ G PLKAA+LINYDPTGPSRLLSTIA+QEGI + P++L QFIDF++      E+F +GSNQYI+TS+HENWF ARC+NT
Subjt:  MDWAFVRKAWDKW-ASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNT

Query:  IKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKN
         + AGEG +++QT  ++LVA+YDGSI +AS+AMA+ADQ + QL RKN
Subjt:  IKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGGGCATTCGTCCGCAAAGCTTGGGACAAATGGGCTTCCGGCAGCATTGGCACCTTCGGTCAGCCATTGAAAGCTGCTCTGTTGATCAATTATGATCCTACTGG
ACCTTCCCGTTTGCTTTCGACCATTGCAGAACAAGAAGGAATATTGCTTAATCCTATAGAACTGAATCAGTTTATCGATTTCATCAAACGTGACAAACCCCAAAATGAGA
GTTTCAGCATCGGCTCAAATCAATACATAATGACATCAGTCCATGAGAATTGGTTTTGTGCAAGGTGCATGAACACTATAAAGCATGCTGGTGAAGGCGTTGTTATAGTG
CAAACAACAGCCTTTATTTTGGTTGCTATGTATGATGGTTCGATTGCAGCAGCATCTCGCGCTATGGCGTCTGCCGATCAGTTATCTTGGCAGTTAGGCAGGAAAAATCT
TTAG
mRNA sequenceShow/hide mRNA sequence
AAATTTTCAGCCATTTACGACTCGCGAGATCTTTGCCAGAGCTCACTGGTTCATTTCCATGGTAGCTTAGACGCCTAGTAGGTTTCGCTTAAATGGATTGGGCATTCGTC
CGCAAAGCTTGGGACAAATGGGCTTCCGGCAGCATTGGCACCTTCGGTCAGCCATTGAAAGCTGCTCTGTTGATCAATTATGATCCTACTGGACCTTCCCGTTTGCTTTC
GACCATTGCAGAACAAGAAGGAATATTGCTTAATCCTATAGAACTGAATCAGTTTATCGATTTCATCAAACGTGACAAACCCCAAAATGAGAGTTTCAGCATCGGCTCAA
ATCAATACATAATGACATCAGTCCATGAGAATTGGTTTTGTGCAAGGTGCATGAACACTATAAAGCATGCTGGTGAAGGCGTTGTTATAGTGCAAACAACAGCCTTTATT
TTGGTTGCTATGTATGATGGTTCGATTGCAGCAGCATCTCGCGCTATGGCGTCTGCCGATCAGTTATCTTGGCAGTTAGGCAGGAAAAATCTTTAGTTGCCTTGAAGTAA
AACCTTGTATGAACTGATGTAGAATTGCACTAGAGTAATGAATATATTTTTAAGCTTTGGACCTCGGTTTTGACTGTTATGAAACTATAGAAATACTATCTATTACTTGG
GATTTGGAGCATATACGGTAGGTATTTGGTAAAGATTTGGTAGAGATATATTTAGTAGATTATATCTGGTAGGTTAAATATGTATTTAGTAAACTGAAATTATATATATC
TCATTAGACCGTCTTCATTTTCTGTATTCTTTTTGAACTTTCTCTCACCTATTCTTTGTATTTATCTTGATCGAGTGTGTGCGTTGTGCGATCCTAACACATTTTTCAAA
TGGTAAACAGGCTCAAGGTTCTGGAATCTGTTGATGACTATATCATGCTTTCTGTTTTGGGCTTTGAATTTTGTTGAATGTGATTTCAATTTTTTTTTCTGGCATTTATA
TTATATAATATGATCTTTTGTTCTATACGCCATCTTCCTAAGTTGCTGTGGTTGCTGCGTCTTAATTTG
Protein sequenceShow/hide protein sequence
MDWAFVRKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTIKHAGEGVVIV
QTTAFILVAMYDGSIAAASRAMASADQLSWQLGRKNL