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Carg11431 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11431
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLate embryogenesis abundant protein
Genome locationCarg_Chr16:2940798..2941408
RNA-Seq ExpressionCarg11431
SyntenyCarg11431
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148978.1 uncharacterized protein LOC101205531 [Cucumis sativus]3.1e-4492Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
        MATAFVRGA TMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSN+S V GE TPWVLDGRTGIYYPKGHE VL SIP+GGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
XP_022931383.1 uncharacterized protein LOC111437581 [Cucurbita moschata]2.9e-50100Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
        MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN

Query:  S
        S
Subjt:  S
XP_022984605.1 uncharacterized protein LOC111482845 [Cucurbita maxima]8.5e-5099.01Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
        MATAFVRGAQ+MNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN

Query:  S
        S
Subjt:  S
XP_023552297.1 uncharacterized protein LOC111810002 [Cucurbita pepo subsp. pepo]6.5e-5099.01Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
        MATAF+RGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN

Query:  S
        S
Subjt:  S
XP_038884831.1 uncharacterized protein LOC120075477 [Benincasa hispida]1.8e-4492Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
        MATAF RGAQTMNSMFFKPIGRKGFHRKSSSPDM+RERVETESKE+KSNKS V GE TPWVLDGRTGIYYPKGHE VLESIP+GGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
TrEMBL top hitse value%identityAlignment
A0A0A0KX78 Uncharacterized protein1.5e-4492Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
        MATAFVRGA TMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSN+S V GE TPWVLDGRTGIYYPKGHE VL SIP+GGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
A0A1S3BTQ2 uncharacterized protein LOC1034930565.8e-4490Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
        MATAFVRGA TMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSN+S V GE TPWVLDGRTGIYYPKGHE VL+ IP+GGGA VNTQVNWFNDEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
A0A6J1C4X8 uncharacterized protein LOC1110083063.2e-4289.11Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
        MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKE+KSNKS V GE TPW+LD RTGIYYPKGHE VLESIP+GGGAAVN QVN F+DEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN

Query:  S
        S
Subjt:  S
A0A6J1EYH0 uncharacterized protein LOC1114375811.4e-50100Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
        MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN

Query:  S
        S
Subjt:  S
A0A6J1J914 uncharacterized protein LOC1114828454.1e-5099.01Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
        MATAFVRGAQ+MNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN

Query:  S
        S
Subjt:  S
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73120.1 unknown protein2.1e-1441.58Show/hide
Query:  RGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRG---------EETPWVLDGRTGIYYPKGHENVLESI-PNGGGAAVNTQVNWF
        RGAQTMN+MF KP+ RK  H+KS+S D++R+ V+TE          +RG           + WV    TGIYYPKG E V++ + P   G+  +  VNWF
Subjt:  RGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRG---------EETPWVLDGRTGIYYPKGHENVLESI-PNGGGAAVNTQVNWF

Query:  N
        +
Subjt:  N
AT3G19550.1 unknown protein6.8e-0532.84Show/hide
Query:  GRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGA
        GR G   K++  + M   +    +++  +     GEE  WV   RTGI++P G E+V+E +PNG  +
Subjt:  GRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTGCATTTGTGAGAGGGGCTCAGACGATGAACTCCATGTTCTTCAAGCCGATCGGGCGGAAGGGCTTCCACAGAAAAAGCTCTTCACCAGATATGATGAGGGA
GAGAGTTGAAACAGAAAGCAAGGAACTGAAGAGCAACAAGAGCCCTGTGAGGGGTGAGGAAACTCCATGGGTGCTTGATGGGCGAACTGGAATTTATTATCCTAAAGGCC
ACGAGAATGTCCTGGAGAGCATTCCCAATGGCGGGGGAGCTGCAGTTAACACCCAGGTCAATTGGTTTAATGACGAAAACAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACTGCATTTGTGAGAGGGGCTCAGACGATGAACTCCATGTTCTTCAAGCCGATCGGGCGGAAGGGCTTCCACAGAAAAAGCTCTTCACCAGATATGATGAGGGA
GAGAGTTGAAACAGAAAGCAAGGAACTGAAGAGCAACAAGAGCCCTGTGAGGGGTGAGGAAACTCCATGGGTGCTTGATGGGCGAACTGGAATTTATTATCCTAAAGGCC
ACGAGAATGTCCTGGAGAGCATTCCCAATGGCGGGGGAGCTGCAGTTAACACCCAGGTCAATTGGTTTAATGACGAAAACAGTTAA
Protein sequenceShow/hide protein sequence
MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDENS