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Carg11474 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11474
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionB3 domain-containing protein
Genome locationCarg_Chr17:9186746..9187873
RNA-Seq ExpressionCarg11474
SyntenyCarg11474
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576012.1 hypothetical protein SDJN03_26651, partial [Cucurbita argyrosperma subsp. sororia]9.4e-11183.8Show/hide
Query:  MSSSCIPCLASTLLLLLLLIPSLKLLINGLNSLPTLVFCLFFKAPPCVLVSLLNALRPPAEASLGALQSLADALKWVFVSTVEMGLGIIGSFLMAVLGAL
        MSSSCIPCLASTLLLLLLLIPSLKLLINGLNSLPTLVFCLFFKAP CVLVSLLNALRPPAEASLGALQSLADALKWVFVSTVEMGLGIIGSFLMAVLGAL
Subjt:  MSSSCIPCLASTLLLLLLLIPSLKLLINGLNSLPTLVFCLFFKAPPCVLVSLLNALRPPAEASLGALQSLADALKWVFVSTVEMGLGIIGSFLMAVLGAL

Query:  KNVVFGSFGELGSVFGGLLDKPQASGEG---------------------------------------ISALLNDPGSAMGKLVGILKGLLEGTGSSMGGV
        KNVVFGSFGE GS FG LLDKP+ASGEG                                       ISALLNDPGSAMGKLV +LKGLLEGTGSSMGGV
Subjt:  KNVVFGSFGELGSVFGGLLDKPQASGEG---------------------------------------ISALLNDPGSAMGKLVGILKGLLEGTGSSMGGV

Query:  RGIVESLVEKVAELGLGVASSSASGWFEAVKKAMDLVIESGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARLSVNMIISYFLG
        RGIVESLVEKVAELGLGVASSSASGWFEAVKKAMDLVIESGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARLSVNMIISYFLG
Subjt:  RGIVESLVEKVAELGLGVASSSASGWFEAVKKAMDLVIESGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARLSVNMIISYFLG

KAG7014533.1 hypothetical protein SDJN02_24711, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-121100Show/hide
Query:  MSSSCIPCLASTLLLLLLLIPSLKLLINGLNSLPTLVFCLFFKAPPCVLVSLLNALRPPAEASLGALQSLADALKWVFVSTVEMGLGIIGSFLMAVLGAL
        MSSSCIPCLASTLLLLLLLIPSLKLLINGLNSLPTLVFCLFFKAPPCVLVSLLNALRPPAEASLGALQSLADALKWVFVSTVEMGLGIIGSFLMAVLGAL
Subjt:  MSSSCIPCLASTLLLLLLLIPSLKLLINGLNSLPTLVFCLFFKAPPCVLVSLLNALRPPAEASLGALQSLADALKWVFVSTVEMGLGIIGSFLMAVLGAL

Query:  KNVVFGSFGELGSVFGGLLDKPQASGEGISALLNDPGSAMGKLVGILKGLLEGTGSSMGGVRGIVESLVEKVAELGLGVASSSASGWFEAVKKAMDLVIE
        KNVVFGSFGELGSVFGGLLDKPQASGEGISALLNDPGSAMGKLVGILKGLLEGTGSSMGGVRGIVESLVEKVAELGLGVASSSASGWFEAVKKAMDLVIE
Subjt:  KNVVFGSFGELGSVFGGLLDKPQASGEGISALLNDPGSAMGKLVGILKGLLEGTGSSMGGVRGIVESLVEKVAELGLGVASSSASGWFEAVKKAMDLVIE

Query:  SGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARLSVNMIISYFLG
        SGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARLSVNMIISYFLG
Subjt:  SGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARLSVNMIISYFLG

XP_022954027.1 uncharacterized protein LOC111456411 [Cucurbita moschata]1.6e-11384.86Show/hide
Query:  MSSSCIPCLASTLLLLLLLIPSLKLLINGLNSLPTLVFCLFFKAPPCVLVSLLNALRPPAEASLGALQSLADALKWVFVSTVEMGLGIIGSFLMAVLGAL
        MSSSCIPCLASTLLLLLLLIPSLKLLINGLNSLPTLVFCLFFKAPPCVLVSLLNALRPPAEASLGALQSLADALKWVFVS+VEMGLGIIGSFLMAVLGAL
Subjt:  MSSSCIPCLASTLLLLLLLIPSLKLLINGLNSLPTLVFCLFFKAPPCVLVSLLNALRPPAEASLGALQSLADALKWVFVSTVEMGLGIIGSFLMAVLGAL

Query:  KNVVFGSFGELGSVFGGLLDKPQASGEG---------------------------------------ISALLNDPGSAMGKLVGILKGLLEGTGSSMGGV
        KNVVFGSFGELGSVFGGLLDKPQASGEG                                       ISALLNDPGSAMGKLVG+LKGLLEGTGSSMGGV
Subjt:  KNVVFGSFGELGSVFGGLLDKPQASGEG---------------------------------------ISALLNDPGSAMGKLVGILKGLLEGTGSSMGGV

Query:  RGIVESLVEKVAELGLGVASSSASGWFEAVKKAMDLVIESGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARLSVNMIISYFLG
        RGIVESLVEKVAELGLGVASSSASGWFEAVKKAMDLVIESGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARL VNM ISYFLG
Subjt:  RGIVESLVEKVAELGLGVASSSASGWFEAVKKAMDLVIESGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARLSVNMIISYFLG

XP_022991981.1 uncharacterized protein LOC111488468 [Cucurbita maxima]6.1e-11083.1Show/hide
Query:  MSSSCIPCLASTLLLLLLLIPSLKLLINGLNSLPTLVFCLFFKAPPCVLVSLLNALRPPAEASLGALQSLADALKWVFVSTVEMGLGIIGSFLMAVLGAL
        MSSSCIPCLASTLLLLLLLIPSLKLLINGLNSLPTLVFCLFFKAPPCVLVSLLNALRPPAEASLGALQSLADALKWV VSTVEMGLGIIGSFLMAVLGAL
Subjt:  MSSSCIPCLASTLLLLLLLIPSLKLLINGLNSLPTLVFCLFFKAPPCVLVSLLNALRPPAEASLGALQSLADALKWVFVSTVEMGLGIIGSFLMAVLGAL

Query:  KNVVFGSFGELGSVFGGLLDKPQASGEG---------------------------------------ISALLNDPGSAMGKLVGILKGLLEGTGSSMGGV
        KNVVFGSF E GS FGGLLDKP+ASGEG                                       ISA LNDPGSAMGKLVGILKG LEG GSSMGGV
Subjt:  KNVVFGSFGELGSVFGGLLDKPQASGEG---------------------------------------ISALLNDPGSAMGKLVGILKGLLEGTGSSMGGV

Query:  RGIVESLVEKVAELGLGVASSSASGWFEAVKKAMDLVIESGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARLSVNMIISYFLG
        RGIVESLVEKVAELGLGVASSSASGWFE VKKAMDLVIESGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARLSVNMIISYFLG
Subjt:  RGIVESLVEKVAELGLGVASSSASGWFEAVKKAMDLVIESGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARLSVNMIISYFLG

XP_038899505.1 uncharacterized protein LOC120086784 [Benincasa hispida]1.1e-5853.43Show/hide
Query:  LASTLLLLLLLIPSLKLLINGLNSLPTLVFCLFFKAPPCVLVSLLNALRPPAEASLGALQSLADALKWVFVSTVEMGLGIIGSFLMAVLGALKNVVFGSF
        +AST+L LL+LIPSLK+LING N L TLV CLF KAPP +++S L A++   EA L A QSLA+ALK +FVST+EMGLGI+ S +MAVL    +VVFGS 
Subjt:  LASTLLLLLLLIPSLKLLINGLNSLPTLVFCLFFKAPPCVLVSLLNALRPPAEASLGALQSLADALKWVFVSTVEMGLGIIGSFLMAVLGALKNVVFGSF

Query:  GELGSVFGGLLDKPQASGEG---------------------------------------ISALLNDPGSAMGKLVGILK-GLLEGTGSSMGGVRGIVESL
         E GS FGGLL+  +AS EG                                       IS LLN+PGSA+G+LVG+LK  L+EG GSSM GVRGIV S 
Subjt:  GELGSVFGGLLDKPQASGEG---------------------------------------ISALLNDPGSAMGKLVGILK-GLLEGTGSSMGGVRGIVESL

Query:  VEKVAELGLGVASSSASGWFEAVKKAMDLVIESGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARLSVNMIISYFLG
        +EK+A     VASSS  G+FE VK   DLV+ SG+TVGGL+E T+AALEVL ME++R +  SLA+L VN II+Y LG
Subjt:  VEKVAELGLGVASSSASGWFEAVKKAMDLVIESGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARLSVNMIISYFLG

TrEMBL top hitse value%identityAlignment
A0A0A0K6V2 Uncharacterized protein1.2e-5549.82Show/hide
Query:  LASTLLLLLLLIPSLKLLINGLNSLPTLVFCLFFKAPPCVLVSLLNALRPPAEASLGALQSLADALKWVFVSTVEMGLGIIGSFLMAVLGALKNVVFGSF
        + ST LLLLLLIPSLK++ING NSL TL  CLF KAPPC+++S L A++ PAEA L A QSL +ALK +FVST+EMG GII SF+M VL A+ NVVFGSF
Subjt:  LASTLLLLLLLIPSLKLLINGLNSLPTLVFCLFFKAPPCVLVSLLNALRPPAEASLGALQSLADALKWVFVSTVEMGLGIIGSFLMAVLGALKNVVFGSF

Query:  GE-LGSVFGGLLDKPQASGEG----------------------------------------ISALLNDPGSAMGKLVGILKG-LLEGTGSSMGGVRGIVE
         E   S FGGLL+  + S EG                                        +S + N+PGS +G LV  LKG L++G GS M GV+GIVE
Subjt:  GE-LGSVFGGLLDKPQASGEG----------------------------------------ISALLNDPGSAMGKLVGILKG-LLEGTGSSMGGVRGIVE

Query:  SLVEKVAELGLGVASSSASGWFEAVKKAMDLVIESGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARLSVNMIISYFLG
         L+EK+      VA+SS  G FE VK   +LV++SG++VGGLVEKT+  LE+L ME LR +I ++A++SVNM+I+Y  G
Subjt:  SLVEKVAELGLGVASSSASGWFEAVKKAMDLVIESGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARLSVNMIISYFLG

A0A5D3BCI5 Uncharacterized protein1.7e-2846.6Show/hide
Query:  MAVLGALKNVVFGSFGELG-SVFGGLLDK--------PQASG-----------------------------EGISALLNDPGSAMGKLVGILK-GLLEGT
        M VL  + N+VFGSF E   S FGGLL+          Q  G                              GIS + N+P SAMG LVG+LK  L+EG 
Subjt:  MAVLGALKNVVFGSFGELG-SVFGGLLDK--------PQASG-----------------------------EGISALLNDPGSAMGKLVGILK-GLLEGT

Query:  GSSMGGVRGIVESLVEKVAELGLGVASSSASGWFEAVKKAMDLVIESGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARLSVNMIISYFLG
        GSSM GVRGIVES +EK+      V SSSA G FE VK  M+LV++SG++VGGLVEKT+ ALE+L ME+LR +I ++A + VNMI++Y LG
Subjt:  GSSMGGVRGIVESLVEKVAELGLGVASSSASGWFEAVKKAMDLVIESGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARLSVNMIISYFLG

A0A6J1DST0 uncharacterized protein LOC1110235981.3e-4445.89Show/hide
Query:  SSSCIPCLASTLLL-LLLLIPSLK-------LLINGLNSLPTLVFCLFFKAPPCVLVSLLNALRPPAEASLGALQSLADALKWVFVSTVEMGLGIIGSFL
        SSS +   AST LL LLL+I SLK       LL NG NSLPT +F LFFK+ PCVL+S    ++ PA+A L A Q LA A++ V + T+EMGLGII SF+
Subjt:  SSSCIPCLASTLLL-LLLLIPSLK-------LLINGLNSLPTLVFCLFFKAPPCVLVSLLNALRPPAEASLGALQSLADALKWVFVSTVEMGLGIIGSFL

Query:  MAVLGALKNVVFGSFGELGSVFGGLLDKPQAS----------------------------------------GEGISALLNDPGSAMGKLVGILKGLLEG
        + VL  LKN VFGS  E GS+FGGL++K ++S                                         + I  LLN+P SA+G+LV  +K  L G
Subjt:  MAVLGALKNVVFGSFGELGSVFGGLLDKPQAS----------------------------------------GEGISALLNDPGSAMGKLVGILKGLLEG

Query:  TGSSMGGVRGIVESLVEKVAELGLGVASSSASGWFEAVKKAMDLVIESGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARLSVNMIISYFLG
        + S+M GVR IV++ + K+   G GVASSSASG FE VK A+ L +ESG TVGGL+EK K +LEVL ME LR +I+S++++ +++I SY  G
Subjt:  TGSSMGGVRGIVESLVEKVAELGLGVASSSASGWFEAVKKAMDLVIESGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARLSVNMIISYFLG

A0A6J1GPW1 uncharacterized protein LOC1114564117.5e-11484.86Show/hide
Query:  MSSSCIPCLASTLLLLLLLIPSLKLLINGLNSLPTLVFCLFFKAPPCVLVSLLNALRPPAEASLGALQSLADALKWVFVSTVEMGLGIIGSFLMAVLGAL
        MSSSCIPCLASTLLLLLLLIPSLKLLINGLNSLPTLVFCLFFKAPPCVLVSLLNALRPPAEASLGALQSLADALKWVFVS+VEMGLGIIGSFLMAVLGAL
Subjt:  MSSSCIPCLASTLLLLLLLIPSLKLLINGLNSLPTLVFCLFFKAPPCVLVSLLNALRPPAEASLGALQSLADALKWVFVSTVEMGLGIIGSFLMAVLGAL

Query:  KNVVFGSFGELGSVFGGLLDKPQASGEG---------------------------------------ISALLNDPGSAMGKLVGILKGLLEGTGSSMGGV
        KNVVFGSFGELGSVFGGLLDKPQASGEG                                       ISALLNDPGSAMGKLVG+LKGLLEGTGSSMGGV
Subjt:  KNVVFGSFGELGSVFGGLLDKPQASGEG---------------------------------------ISALLNDPGSAMGKLVGILKGLLEGTGSSMGGV

Query:  RGIVESLVEKVAELGLGVASSSASGWFEAVKKAMDLVIESGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARLSVNMIISYFLG
        RGIVESLVEKVAELGLGVASSSASGWFEAVKKAMDLVIESGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARL VNM ISYFLG
Subjt:  RGIVESLVEKVAELGLGVASSSASGWFEAVKKAMDLVIESGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARLSVNMIISYFLG

A0A6J1JSB1 uncharacterized protein LOC1114884683.0e-11083.1Show/hide
Query:  MSSSCIPCLASTLLLLLLLIPSLKLLINGLNSLPTLVFCLFFKAPPCVLVSLLNALRPPAEASLGALQSLADALKWVFVSTVEMGLGIIGSFLMAVLGAL
        MSSSCIPCLASTLLLLLLLIPSLKLLINGLNSLPTLVFCLFFKAPPCVLVSLLNALRPPAEASLGALQSLADALKWV VSTVEMGLGIIGSFLMAVLGAL
Subjt:  MSSSCIPCLASTLLLLLLLIPSLKLLINGLNSLPTLVFCLFFKAPPCVLVSLLNALRPPAEASLGALQSLADALKWVFVSTVEMGLGIIGSFLMAVLGAL

Query:  KNVVFGSFGELGSVFGGLLDKPQASGEG---------------------------------------ISALLNDPGSAMGKLVGILKGLLEGTGSSMGGV
        KNVVFGSF E GS FGGLLDKP+ASGEG                                       ISA LNDPGSAMGKLVGILKG LEG GSSMGGV
Subjt:  KNVVFGSFGELGSVFGGLLDKPQASGEG---------------------------------------ISALLNDPGSAMGKLVGILKGLLEGTGSSMGGV

Query:  RGIVESLVEKVAELGLGVASSSASGWFEAVKKAMDLVIESGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARLSVNMIISYFLG
        RGIVESLVEKVAELGLGVASSSASGWFE VKKAMDLVIESGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARLSVNMIISYFLG
Subjt:  RGIVESLVEKVAELGLGVASSSASGWFEAVKKAMDLVIESGFTVGGLVEKTKAALEVLHMEDLRSLIQSLARLSVNMIISYFLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTTCTTGCATTCCTTGCTTAGCTTCAACTCTTCTCCTCCTCCTCCTTCTAATCCCATCGCTAAAGCTCCTCATTAATGGCCTCAACTCCTTGCCCACTTTGGT
TTTTTGCCTGTTCTTCAAGGCCCCACCTTGTGTTCTTGTTTCCCTTCTCAACGCCCTTAGGCCCCCTGCAGAGGCCTCTCTCGGTGCACTCCAGAGCCTTGCCGATGCCT
TGAAGTGGGTTTTTGTAAGCACCGTTGAGATGGGTCTGGGAATTATAGGCTCTTTTTTGATGGCTGTGTTGGGGGCTCTGAAGAATGTGGTTTTTGGTTCTTTTGGTGAG
CTTGGCTCCGTGTTTGGTGGCCTTTTGGACAAGCCTCAGGCTTCTGGGGAAGGCATTTCCGCTCTCTTGAACGACCCGGGTTCAGCCATGGGAAAGTTAGTGGGGATTCT
GAAGGGCTTATTGGAGGGGACTGGTTCGTCCATGGGAGGGGTGCGAGGGATTGTTGAGAGCTTGGTGGAGAAGGTGGCCGAGTTGGGTCTGGGAGTGGCAAGCTCTTCAG
CATCTGGTTGGTTTGAAGCTGTGAAAAAAGCCATGGATTTGGTGATCGAGTCTGGTTTTACCGTTGGAGGGTTAGTTGAGAAGACCAAGGCTGCATTGGAGGTTCTCCAC
ATGGAAGACCTTCGAAGCCTTATTCAAAGCCTTGCTAGGCTAAGTGTGAATATGATTATTAGTTATTTTCTAGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCTTCTTGCATTCCTTGCTTAGCTTCAACTCTTCTCCTCCTCCTCCTTCTAATCCCATCGCTAAAGCTCCTCATTAATGGCCTCAACTCCTTGCCCACTTTGGT
TTTTTGCCTGTTCTTCAAGGCCCCACCTTGTGTTCTTGTTTCCCTTCTCAACGCCCTTAGGCCCCCTGCAGAGGCCTCTCTCGGTGCACTCCAGAGCCTTGCCGATGCCT
TGAAGTGGGTTTTTGTAAGCACCGTTGAGATGGGTCTGGGAATTATAGGCTCTTTTTTGATGGCTGTGTTGGGGGCTCTGAAGAATGTGGTTTTTGGTTCTTTTGGTGAG
CTTGGCTCCGTGTTTGGTGGCCTTTTGGACAAGCCTCAGGCTTCTGGGGAAGGCATTTCCGCTCTCTTGAACGACCCGGGTTCAGCCATGGGAAAGTTAGTGGGGATTCT
GAAGGGCTTATTGGAGGGGACTGGTTCGTCCATGGGAGGGGTGCGAGGGATTGTTGAGAGCTTGGTGGAGAAGGTGGCCGAGTTGGGTCTGGGAGTGGCAAGCTCTTCAG
CATCTGGTTGGTTTGAAGCTGTGAAAAAAGCCATGGATTTGGTGATCGAGTCTGGTTTTACCGTTGGAGGGTTAGTTGAGAAGACCAAGGCTGCATTGGAGGTTCTCCAC
ATGGAAGACCTTCGAAGCCTTATTCAAAGCCTTGCTAGGCTAAGTGTGAATATGATTATTAGTTATTTTCTAGGTTAA
Protein sequenceShow/hide protein sequence
MSSSCIPCLASTLLLLLLLIPSLKLLINGLNSLPTLVFCLFFKAPPCVLVSLLNALRPPAEASLGALQSLADALKWVFVSTVEMGLGIIGSFLMAVLGALKNVVFGSFGE
LGSVFGGLLDKPQASGEGISALLNDPGSAMGKLVGILKGLLEGTGSSMGGVRGIVESLVEKVAELGLGVASSSASGWFEAVKKAMDLVIESGFTVGGLVEKTKAALEVLH
MEDLRSLIQSLARLSVNMIISYFLG