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Carg11493 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11493
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein of unknown function, DUF538
Genome locationCarg_Chr17:9309049..9309739
RNA-Seq ExpressionCarg11493
SyntenyCarg11493
Gene Ontology termsNA
InterPro domainsIPR007493 - Protein of unknown function DUF538
IPR036758 - At5g01610-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576031.1 hypothetical protein SDJN03_26670, partial [Cucurbita argyrosperma subsp. sororia]3.1e-6679.19Show/hide
Query:  MLPSSSVLFLCFSFLYFTSSMAAPYALSDFTASKSIYD----------------------------------ECNAMFENQLHYETNVSGTLSYGQIGAL
        MLPSSSVLF CFSFLYFTSSMAAPYALSDFTASKSIYD                                  ECNAMFENQLHYETNVSGTLSYGQIGAL
Subjt:  MLPSSSVLFLCFSFLYFTSSMAAPYALSDFTASKSIYD----------------------------------ECNAMFENQLHYETNVSGTLSYGQIGAL

Query:  SGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVD
        SGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRK+GNGFVQPVQVKVD
Subjt:  SGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVD

KAG7014552.1 hypothetical protein SDJN02_24730, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-72100Show/hide
Query:  MLPSSSVLFLCFSFLYFTSSMAAPYALSDFTASKSIYDECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVV
        MLPSSSVLFLCFSFLYFTSSMAAPYALSDFTASKSIYDECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVV
Subjt:  MLPSSSVLFLCFSFLYFTSSMAAPYALSDFTASKSIYDECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVV

Query:  FKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVD
        FKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVD
Subjt:  FKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVD

XP_022954139.1 uncharacterized protein At5g01610-like [Cucurbita moschata]1.5e-6579.77Show/hide
Query:  MLPSSSVLFLCFSFLYFTSSMAAPYALSDFTASKSIYD----------------------------------ECNAMFENQLHYETNVSGTLSYGQIGAL
        MLPSSSVLFL FSFLYFTSSMAAPYALSDFTASKSIYD                                  ECNAMFENQLHYETNVSGTLSYGQIGAL
Subjt:  MLPSSSVLFLCFSFLYFTSSMAAPYALSDFTASKSIYD----------------------------------ECNAMFENQLHYETNVSGTLSYGQIGAL

Query:  SGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVD
        SGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVD
Subjt:  SGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVD

XP_022991665.1 uncharacterized protein At5g01610-like [Cucurbita maxima]1.7e-6479.07Show/hide
Query:  MLPSSSVLFLCFSFLYFTSSMAAPYALSDFTASKSIYD----------------------------------ECNAMFENQLHYETNVSGTLSYGQIGAL
        MLPSSS+LFL FSFLYFTSSMAAPYALSDFTASKSIYD                                  ECNAMFENQLHYETNVSGTLSYGQIGAL
Subjt:  MLPSSSVLFLCFSFLYFTSSMAAPYALSDFTASKSIYD----------------------------------ECNAMFENQLHYETNVSGTLSYGQIGAL

Query:  SGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKV
        SGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKV
Subjt:  SGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKV

XP_023549341.1 uncharacterized protein At5g01610-like [Cucurbita pepo subsp. pepo]9.3e-6376.97Show/hide
Query:  MLPSSSVL-----FLCFSFLYFTSSMAAPYALSDFTASKSIYD----------------------------------ECNAMFENQLHYETNVSGTLSYG
        MLPSSSVL     FL FSFLYFTSSMAAPYALSDFTASKSIYD                                  ECNAMFENQLHYETNVSGTLSYG
Subjt:  MLPSSSVL-----FLCFSFLYFTSSMAAPYALSDFTASKSIYD----------------------------------ECNAMFENQLHYETNVSGTLSYG

Query:  QIGALSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVD
        QIGALSGISAKDLFLWFPVK IRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVD
Subjt:  QIGALSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVD

TrEMBL top hitse value%identityAlignment
A0A0A0K6Z0 Uncharacterized protein1.7e-4967.68Show/hide
Query:  MLPSSSVLFLCFSFLYFTSSMAAPYAL-SDFTASKSIYD----------------------------------ECNAMFENQLHYETNVSGTLSYGQIGA
        M P  S+LFL FSFLYFTSSMA P++L S ++ S S YD                                  ECNAMFENQLHYETNVSGTLSYG+IGA
Subjt:  MLPSSSVLFLCFSFLYFTSSMAAPYAL-SDFTASKSIYD----------------------------------ECNAMFENQLHYETNVSGTLSYGQIGA

Query:  LSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNG
        LSGISA+DLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPP CVPNSK+QHRKIGNG
Subjt:  LSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNG

A0A1S3BGD3 uncharacterized protein At5g01610-like6.3e-4967.07Show/hide
Query:  MLPSSSVLFLCFSFLYFTSSMAAPYALSDF-TASKSIYD----------------------------------ECNAMFENQLHYETNVSGTLSYGQIGA
        M P SS+ FL FSFLYFTSS+A P++L+ F + S SIYD                                  ECNAMFENQLHYETNVSGTLSYG+IGA
Subjt:  MLPSSSVLFLCFSFLYFTSSMAAPYALSDF-TASKSIYD----------------------------------ECNAMFENQLHYETNVSGTLSYGQIGA

Query:  LSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNG
        LSGISA+DLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPP CVPN+K+QHRKIGNG
Subjt:  LSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNG

A0A5A7TKT3 DUF538 domain-containing protein9.7e-5067.68Show/hide
Query:  MLPSSSVLFLCFSFLYFTSSMAAPYALSDF-TASKSIYD----------------------------------ECNAMFENQLHYETNVSGTLSYGQIGA
        M P SS+LFL FSFLYFTSS+A P++L+ F + S SIYD                                  ECNAMFENQLHYETNVSGTLSYG+IGA
Subjt:  MLPSSSVLFLCFSFLYFTSSMAAPYALSDF-TASKSIYD----------------------------------ECNAMFENQLHYETNVSGTLSYGQIGA

Query:  LSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNG
        LSGISA+DLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPP CVPN+K+QHRKIGNG
Subjt:  LSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNG

A0A6J1GS21 uncharacterized protein At5g01610-like7.4e-6679.77Show/hide
Query:  MLPSSSVLFLCFSFLYFTSSMAAPYALSDFTASKSIYD----------------------------------ECNAMFENQLHYETNVSGTLSYGQIGAL
        MLPSSSVLFL FSFLYFTSSMAAPYALSDFTASKSIYD                                  ECNAMFENQLHYETNVSGTLSYGQIGAL
Subjt:  MLPSSSVLFLCFSFLYFTSSMAAPYALSDFTASKSIYD----------------------------------ECNAMFENQLHYETNVSGTLSYGQIGAL

Query:  SGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVD
        SGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVD
Subjt:  SGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVD

A0A6J1JTK6 uncharacterized protein At5g01610-like8.2e-6579.07Show/hide
Query:  MLPSSSVLFLCFSFLYFTSSMAAPYALSDFTASKSIYD----------------------------------ECNAMFENQLHYETNVSGTLSYGQIGAL
        MLPSSS+LFL FSFLYFTSSMAAPYALSDFTASKSIYD                                  ECNAMFENQLHYETNVSGTLSYGQIGAL
Subjt:  MLPSSSVLFLCFSFLYFTSSMAAPYALSDFTASKSIYD----------------------------------ECNAMFENQLHYETNVSGTLSYGQIGAL

Query:  SGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKV
        SGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKV
Subjt:  SGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G07460.1 Protein of unknown function, DUF5382.8e-2558.51Show/hide
Query:  YALSDFTASKSIY--DECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECV
        + ++  T   S+Y    C A +E +LHY+  VSGT+ Y QI  LSGISA++LFLW  VKGIRVDVPSSG+I+FDVGV+ KQ+S SLFETP +CV
Subjt:  YALSDFTASKSIY--DECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECV

AT3G07460.2 Protein of unknown function, DUF5382.8e-2558.51Show/hide
Query:  YALSDFTASKSIY--DECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECV
        + ++  T   S+Y    C A +E +LHY+  VSGT+ Y QI  LSGISA++LFLW  VKGIRVDVPSSG+I+FDVGV+ KQ+S SLFETP +CV
Subjt:  YALSDFTASKSIY--DECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECV

AT3G07470.1 Protein of unknown function, DUF5383.5e-2864.04Show/hide
Query:  TASKSIY--DECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVP
        T   S+Y    C A +E ++HY+ N++GT+   QI  LSGISA++LFLWFPVKGIRVDVPSSG+IYFDVGVV KQ+S SLFETP +CVP
Subjt:  TASKSIY--DECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVP

AT5G16380.1 Protein of unknown function, DUF5384.5e-2363.16Show/hide
Query:  CNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPEC
        C+A FENQ H++ N+SG LS G+IG LSG++ K+LFLWF VKGI VD  SSG+I+FDVGV  KQ S SLFE+P +C
Subjt:  CNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPEC

AT5G54530.1 Protein of unknown function, DUF5381.6e-2055.7Show/hide
Query:  CNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPN
        C A FE  +H+E  V G LSYG +  + G+S K+LFLW  VK I V+ P+SGVI FD+GV FKQ S SLFE PP+C P+
Subjt:  CNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCCCTCTTCCTCCGTGCTCTTCCTCTGCTTCTCCTTCCTCTACTTCACCTCTTCAATGGCGGCTCCTTATGCTCTCAGCGACTTCACTGCTTCGAAGTCGATTTA
CGATGAGTGTAATGCGATGTTCGAGAATCAACTGCATTACGAGACTAATGTTTCCGGCACTTTGAGTTATGGCCAGATCGGCGCCTTGTCTGGGATTTCCGCCAAGGATC
TCTTCTTGTGGTTTCCTGTTAAGGGGATTCGCGTCGATGTTCCTAGCTCCGGTGTTATTTATTTCGACGTCGGTGTTGTTTTCAAGCAATTCTCTCAGTCTCTCTTCGAA
ACCCCGCCTGAATGTGTCCCTAATTCTAAGACTCAACACAGAAAGATTGGGAATGGATTTGTTCAGCCAGTTCAAGTGAAAGTGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCCCTCTTCCTCCGTGCTCTTCCTCTGCTTCTCCTTCCTCTACTTCACCTCTTCAATGGCGGCTCCTTATGCTCTCAGCGACTTCACTGCTTCGAAGTCGATTTA
CGATGAGTGTAATGCGATGTTCGAGAATCAACTGCATTACGAGACTAATGTTTCCGGCACTTTGAGTTATGGCCAGATCGGCGCCTTGTCTGGGATTTCCGCCAAGGATC
TCTTCTTGTGGTTTCCTGTTAAGGGGATTCGCGTCGATGTTCCTAGCTCCGGTGTTATTTATTTCGACGTCGGTGTTGTTTTCAAGCAATTCTCTCAGTCTCTCTTCGAA
ACCCCGCCTGAATGTGTCCCTAATTCTAAGACTCAACACAGAAAGATTGGGAATGGATTTGTTCAGCCAGTTCAAGTGAAAGTGGATTGA
Protein sequenceShow/hide protein sequence
MLPSSSVLFLCFSFLYFTSSMAAPYALSDFTASKSIYDECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFE
TPPECVPNSKTQHRKIGNGFVQPVQVKVD