CuGenDBv2

Gene ID	Carg11504
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Fanconi anemia group D2 protein
Genome location	Carg_Chr17:9386170..9386499
RNA-Seq Expression	Carg11504
Synteny	Carg11504
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7014563.1 hypothetical protein SDJN02_24741, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.0e-52

100

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Query:  MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSDASFVLILKFSCSFTFPGGFQIVVFDVVGCFFLSLIQIERNFDALEARISNLESVRNRDSIPS
        MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSDASFVLILKFSCSFTFPGGFQIVVFDVVGCFFLSLIQIERNFDALEARISNLESVRNRDSIPS
Subjt:  MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSDASFVLILKFSCSFTFPGGFQIVVFDVVGCFFLSLIQIERNFDALEARISNLESVRNRDSIPS

Query:  AEVFLFLCY
        AEVFLFLCY
Subjt:  AEVFLFLCY

XP_022953273.1 uncharacterized protein LOC111455871 isoform X1 [Cucurbita moschata]

8.1e-22

64.71

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Query:  MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSDASFVLILKFSCSFTFPGGFQIVVFDVVGCFFLSLIQIERNFDALEARISNLESVRNRDSIPS
        MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSD                                    IERNFDALEARISNLESVRNRDSIPS
Subjt:  MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSDASFVLILKFSCSFTFPGGFQIVVFDVVGCFFLSLIQIERNFDALEARISNLESVRNRDSIPS

Query:  AE
        AE
Subjt:  AE

XP_022953274.1 uncharacterized protein LOC111455871 isoform X2 [Cucurbita moschata]

8.1e-22

64.71

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Query:  MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSDASFVLILKFSCSFTFPGGFQIVVFDVVGCFFLSLIQIERNFDALEARISNLESVRNRDSIPS
        MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSD                                    IERNFDALEARISNLESVRNRDSIPS
Subjt:  MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSDASFVLILKFSCSFTFPGGFQIVVFDVVGCFFLSLIQIERNFDALEARISNLESVRNRDSIPS

Query:  AE
        AE
Subjt:  AE

XP_022992002.1 uncharacterized protein LOC111488481 isoform X1 [Cucurbita maxima]

8.1e-22

64.71

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Query:  MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSDASFVLILKFSCSFTFPGGFQIVVFDVVGCFFLSLIQIERNFDALEARISNLESVRNRDSIPS
        MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSD                                    IERNFDALEARISNLESVRNRDSIPS
Subjt:  MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSDASFVLILKFSCSFTFPGGFQIVVFDVVGCFFLSLIQIERNFDALEARISNLESVRNRDSIPS

Query:  AE
        AE
Subjt:  AE

XP_022992003.1 uncharacterized protein LOC111488481 isoform X2 [Cucurbita maxima]

8.1e-22

64.71

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Query:  MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSDASFVLILKFSCSFTFPGGFQIVVFDVVGCFFLSLIQIERNFDALEARISNLESVRNRDSIPS
        MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSD                                    IERNFDALEARISNLESVRNRDSIPS
Subjt:  MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSDASFVLILKFSCSFTFPGGFQIVVFDVVGCFFLSLIQIERNFDALEARISNLESVRNRDSIPS

Query:  AE
        AE
Subjt:  AE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K8L3 Uncharacterized protein

1.5e-18

56.86

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Query:  MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSDASFVLILKFSCSFTFPGGFQIVVFDVVGCFFLSLIQIERNFDALEARISNLESVRNRDSIPS
        MLRTRLFWFS+GFA T+ASIS FVWRDLLA+RCALSSDASF                                 +ER+FDALEARISNLES RNR+S+ S
Subjt:  MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSDASFVLILKFSCSFTFPGGFQIVVFDVVGCFFLSLIQIERNFDALEARISNLESVRNRDSIPS

Query:  AE
        AE
Subjt:  AE

A0A6J1GMY6 uncharacterized protein LOC111455871 isoform X1

3.9e-22

64.71

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Query:  MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSDASFVLILKFSCSFTFPGGFQIVVFDVVGCFFLSLIQIERNFDALEARISNLESVRNRDSIPS
        MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSD                                    IERNFDALEARISNLESVRNRDSIPS
Subjt:  MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSDASFVLILKFSCSFTFPGGFQIVVFDVVGCFFLSLIQIERNFDALEARISNLESVRNRDSIPS

Query:  AE
        AE
Subjt:  AE

A0A6J1GP63 uncharacterized protein LOC111455871 isoform X2

3.9e-22

64.71

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Query:  MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSDASFVLILKFSCSFTFPGGFQIVVFDVVGCFFLSLIQIERNFDALEARISNLESVRNRDSIPS
        MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSD                                    IERNFDALEARISNLESVRNRDSIPS
Subjt:  MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSDASFVLILKFSCSFTFPGGFQIVVFDVVGCFFLSLIQIERNFDALEARISNLESVRNRDSIPS

Query:  AE
        AE
Subjt:  AE

A0A6J1JNH5 uncharacterized protein LOC111488481 isoform X1

3.9e-22

64.71

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Query:  MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSDASFVLILKFSCSFTFPGGFQIVVFDVVGCFFLSLIQIERNFDALEARISNLESVRNRDSIPS
        MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSD                                    IERNFDALEARISNLESVRNRDSIPS
Subjt:  MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSDASFVLILKFSCSFTFPGGFQIVVFDVVGCFFLSLIQIERNFDALEARISNLESVRNRDSIPS

Query:  AE
        AE
Subjt:  AE

A0A6J1JXU9 uncharacterized protein LOC111488481 isoform X2

3.9e-22

64.71

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Query:  MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSDASFVLILKFSCSFTFPGGFQIVVFDVVGCFFLSLIQIERNFDALEARISNLESVRNRDSIPS
        MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSD                                    IERNFDALEARISNLESVRNRDSIPS
Subjt:  MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSDASFVLILKFSCSFTFPGGFQIVVFDVVGCFFLSLIQIERNFDALEARISNLESVRNRDSIPS

Query:  AE
        AE
Subjt:  AE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G07568.1 unknown protein

1.2e-07

63.16

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Query:  MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSD
        MLRTRL WF++GF+ T  SI+  VWRDL A R A+SSD
Subjt:  MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSD

Sequences

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CDS sequence

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ATGTTGAGAACTCGATTGTTTTGGTTCAGTGTTGGATTTGCGGCCACGTCCGCTTCGATTTCGCAATTCGTCTGGAGAGATCTACTGGCTCATCGATGTGCTCTTTCATC
TGATGCAAGTTTTGTTTTGATCCTGAAATTTTCGTGTTCTTTCACCTTCCCAGGAGGTTTTCAGATTGTGGTTTTTGATGTTGTTGGTTGTTTTTTCCTCTCATTGATAC
AGATTGAGCGGAATTTCGATGCACTGGAAGCTAGAATCTCGAATCTTGAGTCGGTTCGAAACCGGGATTCGATTCCATCTGCTGAGGTATTTCTCTTTCTGTGCTACTGA

mRNA sequence

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Protein sequence

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MLRTRLFWFSVGFAATSASISQFVWRDLLAHRCALSSDASFVLILKFSCSFTFPGGFQIVVFDVVGCFFLSLIQIERNFDALEARISNLESVRNRDSIPSAEVFLFLCY

Carg11504 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome