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Carg11520 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11520
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtodermal factor 1 like
Genome locationCarg_Chr17:9471299..9471991
RNA-Seq ExpressionCarg11520
SyntenyCarg11520
Gene Ontology termsNA
InterPro domainsIPR039923 - Protodermal factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576062.1 hypothetical protein SDJN03_26701, partial [Cucurbita argyrosperma subsp. sororia]1.2e-74100Show/hide
Query:  METRLLSFLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFGR
        METRLLSFLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFGR
Subjt:  METRLLSFLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFGR

Query:  VVKEATAALLNSYARRDFPYSAWEVKTLLIKALVSKEAAALQSQRFAFANES
        VVKEATAALLNSYARRDFPYSAWEVKTLLIKALVSKEAAALQSQRFAFANES
Subjt:  VVKEATAALLNSYARRDFPYSAWEVKTLLIKALVSKEAAALQSQRFAFANES

KAG7014579.1 hypothetical protein SDJN02_24757, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-74100Show/hide
Query:  METRLLSFLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFGR
        METRLLSFLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFGR
Subjt:  METRLLSFLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFGR

Query:  VVKEATAALLNSYARRDFPYSAWEVKTLLIKALVSKEAAALQSQRFAFANES
        VVKEATAALLNSYARRDFPYSAWEVKTLLIKALVSKEAAALQSQRFAFANES
Subjt:  VVKEATAALLNSYARRDFPYSAWEVKTLLIKALVSKEAAALQSQRFAFANES

XP_022953859.1 uncharacterized protein LOC111456270 [Cucurbita moschata]1.0e-6794.12Show/hide
Query:  MET-RLLSFLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFG
        MET RLLS+L LLYF A AAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRM PESATVAKIFGSRAHERYG+EMTLLAAATVA+ADEEEEEEAFG
Subjt:  MET-RLLSFLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFG

Query:  RVVKEATAALLNSYARRDFPYSAWEVKTLLIKALVSKEAAALQSQRFAFANES
        RVVKEATAALLNSYARRDFPY+AWEVKTLLIKALVSKEAAALQSQRFAFANES
Subjt:  RVVKEATAALLNSYARRDFPYSAWEVKTLLIKALVSKEAAALQSQRFAFANES

XP_022991546.1 uncharacterized protein LOC111488125 [Cucurbita maxima]8.6e-7096.05Show/hide
Query:  METRLLSFLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFGR
        METRLLSFL LLYF  AAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRM PESATVAKIFGSRAHERYG+EMTLLAAATVAVADEEEEEEAFGR
Subjt:  METRLLSFLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFGR

Query:  VVKEATAALLNSYARRDFPYSAWEVKTLLIKALVSKEAAALQSQRFAFANES
        VVKEATAALLNSYARRDFPY+AWEVKTLLIKALVSKEAAALQSQRFAFANES
Subjt:  VVKEATAALLNSYARRDFPYSAWEVKTLLIKALVSKEAAALQSQRFAFANES

XP_023548905.1 uncharacterized protein LOC111807417 [Cucurbita pepo subsp. pepo]5.2e-6794.12Show/hide
Query:  MET-RLLSFLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFG
        MET RLLS+L LLYF A AAAGEAALSR PGFLFSRTRGRCTPEFWSSRREAWPRM PESATVAKIFGSRAHERYG+EMTLLAAATVAVADEEEEEEAFG
Subjt:  MET-RLLSFLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFG

Query:  RVVKEATAALLNSYARRDFPYSAWEVKTLLIKALVSKEAAALQSQRFAFANES
        RVVKEATAALLNSYARRDFPYSAWEVKTLLIKALVSKEAAALQS RFAFANES
Subjt:  RVVKEATAALLNSYARRDFPYSAWEVKTLLIKALVSKEAAALQSQRFAFANES

TrEMBL top hitse value%identityAlignment
A0A0A0K735 Uncharacterized protein1.6e-5078.15Show/hide
Query:  TRLLSFLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFGRVV
        +R L+ L LL FAAA A  E A +RRPGFLFSRT GRCT +FWSSR EAWPRM PESATVAKIFGSRAHERYG+EMTL+ AA  A    +EEEE FGRVV
Subjt:  TRLLSFLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFGRVV

Query:  KEATAALLNSYARRD-FPYSAWEVKTLLIKALVSKEAAALQSQRFAFANES
        KEATAALLNSY RR  FPYSAWEVKTL IKALVSKEAA LQSQRFAFANES
Subjt:  KEATAALLNSYARRD-FPYSAWEVKTLLIKALVSKEAAALQSQRFAFANES

A0A1S3BQF6 uncharacterized protein LOC1034925951.4e-4978.77Show/hide
Query:  FLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFGRVVKEATA
        FL LL   + AAA E A +R PGFLFSRT GRCT +FWSSR EAWPRM PESATVAKIFGSRA ERYG+EMTL+ AA  A      EEE FGRVVKEATA
Subjt:  FLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFGRVVKEATA

Query:  ALLNSYA-RRDFPYSAWEVKTLLIKALVSKEAAALQSQRFAFANES
        ALLNSYA RRDFPYSAWEVKTLLIKALVSKEAA LQSQRFAFANES
Subjt:  ALLNSYA-RRDFPYSAWEVKTLLIKALVSKEAAALQSQRFAFANES

A0A5A7UZL8 Uncharacterized protein1.4e-4978.77Show/hide
Query:  FLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFGRVVKEATA
        FL LL   + AAA E A +R PGFLFSRT GRCT +FWSSR EAWPRM PESATVAKIFGSRA ERYG+EMTL+ AA  A      EEE FGRVVKEATA
Subjt:  FLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFGRVVKEATA

Query:  ALLNSYA-RRDFPYSAWEVKTLLIKALVSKEAAALQSQRFAFANES
        ALLNSYA RRDFPYSAWEVKTLLIKALVSKEAA LQSQRFAFANES
Subjt:  ALLNSYA-RRDFPYSAWEVKTLLIKALVSKEAAALQSQRFAFANES

A0A6J1GR22 uncharacterized protein LOC1114562705.1e-6894.12Show/hide
Query:  MET-RLLSFLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFG
        MET RLLS+L LLYF A AAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRM PESATVAKIFGSRAHERYG+EMTLLAAATVA+ADEEEEEEAFG
Subjt:  MET-RLLSFLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFG

Query:  RVVKEATAALLNSYARRDFPYSAWEVKTLLIKALVSKEAAALQSQRFAFANES
        RVVKEATAALLNSYARRDFPY+AWEVKTLLIKALVSKEAAALQSQRFAFANES
Subjt:  RVVKEATAALLNSYARRDFPYSAWEVKTLLIKALVSKEAAALQSQRFAFANES

A0A6J1JR18 uncharacterized protein LOC1114881254.1e-7096.05Show/hide
Query:  METRLLSFLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFGR
        METRLLSFL LLYF  AAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRM PESATVAKIFGSRAHERYG+EMTLLAAATVAVADEEEEEEAFGR
Subjt:  METRLLSFLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFGR

Query:  VVKEATAALLNSYARRDFPYSAWEVKTLLIKALVSKEAAALQSQRFAFANES
        VVKEATAALLNSYARRDFPY+AWEVKTLLIKALVSKEAAALQSQRFAFANES
Subjt:  VVKEATAALLNSYARRDFPYSAWEVKTLLIKALVSKEAAALQSQRFAFANES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G16630.1 Pollen Ole e 1 allergen and extensin family protein1.0e-0433.91Show/hide
Query:  CTPEFW--SSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFGRVVKEATAALLNSYARRDFPYSAWEVKTLLIKALV--S
        C+ + W     R  W  + P++  VA  FG  A   YGT+MT+  A        +   EA+  +++EAT ALLNSY    FPY++  V T    AL+  S
Subjt:  CTPEFW--SSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFGRVVKEATAALLNSYARRDFPYSAWEVKTLLIKALV--S

Query:  KEAAALQSQRFAFAN
        +    + + RF  AN
Subjt:  KEAAALQSQRFAFAN

AT2G20515.1 unknown protein2.0e-3249.66Show/hide
Query:  LLSFLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSR-AHERYGTEMTLLAAATVAVADEEEEEEAFGRVVK
        L++F  L +FA  ++A       RPGF+++R RGRCTP++WSS+REAWPRM PE +TV KIFG   A ER+ +++TL+     + A  +EE  A+G ++K
Subjt:  LLSFLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSR-AHERYGTEMTLLAAATVAVADEEEEEEAFGRVVK

Query:  EATAALLNSYARRDFPYSAWEVKTLLIKALVSKEAAALQSQRFAFAN
        +  AAL+NSYAR+ F Y+ WEVKT+LI+A+VS+ AA  Q++ FA AN
Subjt:  EATAALLNSYARRDFPYSAWEVKTLLIKALVSKEAAALQSQRFAFAN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACTCGCTTACTCAGTTTTCTTCCCCTTCTCTACTTCGCCGCCGCCGCCGCCGCAGGAGAAGCTGCATTATCGCGCCGTCCTGGATTTCTCTTCTCAAGAACCAG
AGGAAGATGCACTCCAGAGTTCTGGAGTAGTAGGAGAGAGGCTTGGCCTCGGATGACGCCGGAATCGGCGACGGTGGCGAAGATTTTCGGATCGAGAGCTCACGAACGGT
ACGGCACTGAGATGACATTACTGGCAGCGGCGACGGTGGCAGTGGCGGATGAGGAAGAGGAAGAGGAGGCGTTCGGTAGAGTAGTGAAGGAGGCAACCGCAGCACTGTTG
AATTCGTATGCAAGAAGGGATTTCCCATACTCAGCTTGGGAGGTGAAAACATTGCTCATCAAAGCATTGGTATCTAAAGAGGCTGCTGCTCTTCAATCTCAACGCTTTGC
CTTCGCTAATGAGTCC
mRNA sequenceShow/hide mRNA sequence
ATGGAGACTCGCTTACTCAGTTTTCTTCCCCTTCTCTACTTCGCCGCCGCCGCCGCCGCAGGAGAAGCTGCATTATCGCGCCGTCCTGGATTTCTCTTCTCAAGAACCAG
AGGAAGATGCACTCCAGAGTTCTGGAGTAGTAGGAGAGAGGCTTGGCCTCGGATGACGCCGGAATCGGCGACGGTGGCGAAGATTTTCGGATCGAGAGCTCACGAACGGT
ACGGCACTGAGATGACATTACTGGCAGCGGCGACGGTGGCAGTGGCGGATGAGGAAGAGGAAGAGGAGGCGTTCGGTAGAGTAGTGAAGGAGGCAACCGCAGCACTGTTG
AATTCGTATGCAAGAAGGGATTTCCCATACTCAGCTTGGGAGGTGAAAACATTGCTCATCAAAGCATTGGTATCTAAAGAGGCTGCTGCTCTTCAATCTCAACGCTTTGC
CTTCGCTAATGAGTCC
Protein sequenceShow/hide protein sequence
METRLLSFLPLLYFAAAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFGRVVKEATAALL
NSYARRDFPYSAWEVKTLLIKALVSKEAAALQSQRFAFANES