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Carg11537 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11537
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr17:9616520..9617717
RNA-Seq ExpressionCarg11537
SyntenyCarg11537
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACR33875.1 unknown [Zea mays]6.8e-3263.3Show/hide
Query:  DELQPIGVGVSLHESHEPVPLPRSPHHVLGLDSRRFSINELGVHIHRLNHTFLIDHVESGNVPDLPRRVEHRRLLELENGHSVGAVSGFCQPHVRHRLLV
        DEL+ +G GV LHE+HE VPL R  HHVLGLD RR +++ELG H+H L H  ++ HV++ +V  L RRVEHRR LE E+GH+VGAV+G  QPHVR RLLV
Subjt:  DELQPIGVGVSLHESHEPVPLPRSPHHVLGLDSRRFSINELGVHIHRLNHTFLIDHVESGNVPDLPRRVEHRRLLELENGHSVGAVSGFCQPHVRHRLLV

Query:  RALDELDLR
        RALDELD R
Subjt:  RALDELDLR

ACR35848.1 unknown [Zea mays]6.8e-3263.3Show/hide
Query:  DELQPIGVGVSLHESHEPVPLPRSPHHVLGLDSRRFSINELGVHIHRLNHTFLIDHVESGNVPDLPRRVEHRRLLELENGHSVGAVSGFCQPHVRHRLLV
        DEL+ +G GV LHE+HE VPL R  HHVLGLD RR +++ELG H+H L H  ++ HV++ +V  L RRVEHRR LE E+GH+VGAV+G  QPHVR RLLV
Subjt:  DELQPIGVGVSLHESHEPVPLPRSPHHVLGLDSRRFSINELGVHIHRLNHTFLIDHVESGNVPDLPRRVEHRRLLELENGHSVGAVSGFCQPHVRHRLLV

Query:  RALDELDLR
        RALDELD R
Subjt:  RALDELDLR

KAG7014595.1 hypothetical protein SDJN02_24774, partial [Cucurbita argyrosperma subsp. argyrosperma]9.9e-140100Show/hide
Query:  MGRSPGVLFFFGTKLTHHLIKFPSYEVVIGYIVRLSFVEEEGIDSNKFFVHQHQHSIDRDSTQNKIGQKQVNLITEQTMRSRNRIGRFSFLDELQPIGVG
        MGRSPGVLFFFGTKLTHHLIKFPSYEVVIGYIVRLSFVEEEGIDSNKFFVHQHQHSIDRDSTQNKIGQKQVNLITEQTMRSRNRIGRFSFLDELQPIGVG
Subjt:  MGRSPGVLFFFGTKLTHHLIKFPSYEVVIGYIVRLSFVEEEGIDSNKFFVHQHQHSIDRDSTQNKIGQKQVNLITEQTMRSRNRIGRFSFLDELQPIGVG

Query:  VSLHESHEPVPLPRSPHHVLGLDSRRFSINELGVHIHRLNHTFLIDHVESGNVPDLPRRVEHRRLLELENGHSVGAVSGFCQPHVRHRLLVRALDELDLR
        VSLHESHEPVPLPRSPHHVLGLDSRRFSINELGVHIHRLNHTFLIDHVESGNVPDLPRRVEHRRLLELENGHSVGAVSGFCQPHVRHRLLVRALDELDLR
Subjt:  VSLHESHEPVPLPRSPHHVLGLDSRRFSINELGVHIHRLNHTFLIDHVESGNVPDLPRRVEHRRLLELENGHSVGAVSGFCQPHVRHRLLVRALDELDLR

Query:  QNHEDRIGRPSVGLTSAASDRLAFSARDVKGTAVECGEDAAVESGGGKSC
        QNHEDRIGRPSVGLTSAASDRLAFSARDVKGTAVECGEDAAVESGGGKSC
Subjt:  QNHEDRIGRPSVGLTSAASDRLAFSARDVKGTAVECGEDAAVESGGGKSC

TrEMBL top hitse value%identityAlignment
C4IY75 Uncharacterized protein3.3e-3263.3Show/hide
Query:  DELQPIGVGVSLHESHEPVPLPRSPHHVLGLDSRRFSINELGVHIHRLNHTFLIDHVESGNVPDLPRRVEHRRLLELENGHSVGAVSGFCQPHVRHRLLV
        DEL+ +G GV LHE+HE VPL R  HHVLGLD RR +++ELG H+H L H  ++ HV++ +V  L RRVEHRR LE E+GH+VGAV+G  QPHVR RLLV
Subjt:  DELQPIGVGVSLHESHEPVPLPRSPHHVLGLDSRRFSINELGVHIHRLNHTFLIDHVESGNVPDLPRRVEHRRLLELENGHSVGAVSGFCQPHVRHRLLV

Query:  RALDELDLR
        RALDELD R
Subjt:  RALDELDLR

C4J3U8 Uncharacterized protein3.3e-3263.3Show/hide
Query:  DELQPIGVGVSLHESHEPVPLPRSPHHVLGLDSRRFSINELGVHIHRLNHTFLIDHVESGNVPDLPRRVEHRRLLELENGHSVGAVSGFCQPHVRHRLLV
        DEL+ +G GV LHE+HE VPL R  HHVLGLD RR +++ELG H+H L H  ++ HV++ +V  L RRVEHRR LE E+GH+VGAV+G  QPHVR RLLV
Subjt:  DELQPIGVGVSLHESHEPVPLPRSPHHVLGLDSRRFSINELGVHIHRLNHTFLIDHVESGNVPDLPRRVEHRRLLELENGHSVGAVSGFCQPHVRHRLLV

Query:  RALDELDLR
        RALDELD R
Subjt:  RALDELDLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGAAGCCCAGGAGTTTTGTTCTTCTTTGGAACCAAACTAACACATCACCTCATCAAATTCCCGAGCTATGAGGTAGTAATCGGCTATATAGTACGACTTAGCTT
TGTTGAAGAAGAAGGCATAGATTCCAACAAGTTCTTCGTCCATCAGCATCAACACAGTATTGATCGTGATTCAACGCAGAACAAAATTGGCCAAAAACAGGTCAATCTAA
TCACAGAACAGACAATGAGAAGCAGAAACCGTATTGGGCGATTTTCATTTCTTGACGAATTGCAACCCATTGGCGTTGGAGTATCGCTCCATGAATCTCATGAACCTGTC
CCACTCCCTCGGAGTCCGCATCACGTACTTGGCCTCGATTCCCGCAGGTTTTCCATTAATGAACTTGGCGTTCACATCCACCGACTGAATCACACCTTCCTCATCGATCA
TGTAGAATCCGGTAATGTCCCCGACCTCCCCCGACGAGTCGAACACCGACGGCTGCTCGAACTTGAAAATGGCCATTCCGTTGGTGCCGTCTCGGGATTTTGTCAGCCTC
ACGTCCGGCACCGTCTGCTCGTCCGTGCCCTGGATGAACTGGATCTTCGGCAGAACCATGAGGATCGTATTGGACGGCCGTCCGTGGGGTTGACATCTGCGGCGAGTGAC
CGTCTGGCATTTTCCGCCAGAGACGTTAAGGGAACGGCCGTGGAATGCGGAGAAGACGCTGCTGTGGAGTCTGGCGGAGGCAAAAGCTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGAAGCCCAGGAGTTTTGTTCTTCTTTGGAACCAAACTAACACATCACCTCATCAAATTCCCGAGCTATGAGGTAGTAATCGGCTATATAGTACGACTTAGCTT
TGTTGAAGAAGAAGGCATAGATTCCAACAAGTTCTTCGTCCATCAGCATCAACACAGTATTGATCGTGATTCAACGCAGAACAAAATTGGCCAAAAACAGGTCAATCTAA
TCACAGAACAGACAATGAGAAGCAGAAACCGTATTGGGCGATTTTCATTTCTTGACGAATTGCAACCCATTGGCGTTGGAGTATCGCTCCATGAATCTCATGAACCTGTC
CCACTCCCTCGGAGTCCGCATCACGTACTTGGCCTCGATTCCCGCAGGTTTTCCATTAATGAACTTGGCGTTCACATCCACCGACTGAATCACACCTTCCTCATCGATCA
TGTAGAATCCGGTAATGTCCCCGACCTCCCCCGACGAGTCGAACACCGACGGCTGCTCGAACTTGAAAATGGCCATTCCGTTGGTGCCGTCTCGGGATTTTGTCAGCCTC
ACGTCCGGCACCGTCTGCTCGTCCGTGCCCTGGATGAACTGGATCTTCGGCAGAACCATGAGGATCGTATTGGACGGCCGTCCGTGGGGTTGACATCTGCGGCGAGTGAC
CGTCTGGCATTTTCCGCCAGAGACGTTAAGGGAACGGCCGTGGAATGCGGAGAAGACGCTGCTGTGGAGTCTGGCGGAGGCAAAAGCTGCTGA
Protein sequenceShow/hide protein sequence
MGRSPGVLFFFGTKLTHHLIKFPSYEVVIGYIVRLSFVEEEGIDSNKFFVHQHQHSIDRDSTQNKIGQKQVNLITEQTMRSRNRIGRFSFLDELQPIGVGVSLHESHEPV
PLPRSPHHVLGLDSRRFSINELGVHIHRLNHTFLIDHVESGNVPDLPRRVEHRRLLELENGHSVGAVSGFCQPHVRHRLLVRALDELDLRQNHEDRIGRPSVGLTSAASD
RLAFSARDVKGTAVECGEDAAVESGGGKSC