; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg11539 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11539
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionVacuolar sorting-associated protein 62
Genome locationCarg_Chr17:9619000..9621980
RNA-Seq ExpressionCarg11539
SyntenyCarg11539
Gene Ontology termsNA
InterPro domainsIPR014807 - Cytochrome c oxidase assembly factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576079.1 hypothetical protein SDJN03_26718, partial [Cucurbita argyrosperma subsp. sororia]4.6e-10096.92Show/hide
Query:  MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL
        MLAKRLLSIFKRSPTPNA     SSSVRPSEEGV KSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL
Subjt:  MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL

Query:  AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
        AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
Subjt:  AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
KAG7014597.1 hypothetical protein SDJN02_24776 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-105100Show/hide
Query:  MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL
        MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL
Subjt:  MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL

Query:  AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
        AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
Subjt:  AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
XP_022954302.1 uncharacterized protein LOC111456591 isoform X1 [Cucurbita moschata]7.8e-10096.41Show/hide
Query:  MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL
        MLAKRLLSIFKRSPTPNAS    SSSVRPSEEGVNKSWGR AVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNN+AIIDAIGEPIVKGPWYNASL
Subjt:  MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL

Query:  AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
        AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGE+SWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
Subjt:  AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
XP_022954303.1 uncharacterized protein LOC111456591 isoform X2 [Cucurbita moschata]2.3e-9995.9Show/hide
Query:  MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL
        MLAKRLLSIFKRSPTPNA     SSSVRPSEEGVNKSWGR AVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNN+AIIDAIGEPIVKGPWYNASL
Subjt:  MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL

Query:  AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
        AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGE+SWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
Subjt:  AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
XP_022991411.1 uncharacterized protein LOC111488050 isoform X1 [Cucurbita maxima]8.6e-9995.38Show/hide
Query:  MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL
        MLAKR LSIFKRSPTPNAS    SSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNN+AIIDAIGEPIVKGPWYNASL
Subjt:  MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL

Query:  AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
        AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQT+RINLTEKFAPAAA CVACTDCQSP AEKR
Subjt:  AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
TrEMBL top hitse value%identityAlignment
A0A0A0KF26 Uncharacterized protein1.3e-8784.1Show/hide
Query:  MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL
        MLAKR  SIFKRS TP+AS    S+S++P+E  VNKSWGRKAVSFVL+TVTGGVALSALDDLAIYHSCSSKAIEK +NN+A+IDAIGEPI KGPWYNASL
Subjt:  MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL

Query:  AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
        AVAHKRHSLSCTFPVSGPQGTGI+QLKAVRNGEDSWISFLRPRDWDIL+MDALL+VPENEGKQ+T+RINL+EKFAP  AACV+CTDCQ PE EKR
Subjt:  AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
A0A6J1GQN1 uncharacterized protein LOC111456591 isoform X13.8e-10096.41Show/hide
Query:  MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL
        MLAKRLLSIFKRSPTPNAS    SSSVRPSEEGVNKSWGR AVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNN+AIIDAIGEPIVKGPWYNASL
Subjt:  MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL

Query:  AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
        AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGE+SWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
Subjt:  AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
A0A6J1GQQ6 uncharacterized protein LOC111456591 isoform X21.1e-9995.9Show/hide
Query:  MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL
        MLAKRLLSIFKRSPTPNA     SSSVRPSEEGVNKSWGR AVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNN+AIIDAIGEPIVKGPWYNASL
Subjt:  MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL

Query:  AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
        AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGE+SWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
Subjt:  AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
A0A6J1JLR1 uncharacterized protein LOC111488050 isoform X21.2e-9894.87Show/hide
Query:  MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL
        MLAKR LSIFKRSPTPNA     SSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNN+AIIDAIGEPIVKGPWYNASL
Subjt:  MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL

Query:  AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
        AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQT+RINLTEKFAPAAA CVACTDCQSP AEKR
Subjt:  AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
A0A6J1JQM9 uncharacterized protein LOC111488050 isoform X14.2e-9995.38Show/hide
Query:  MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL
        MLAKR LSIFKRSPTPNAS    SSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNN+AIIDAIGEPIVKGPWYNASL
Subjt:  MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL

Query:  AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
        AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQT+RINLTEKFAPAAA CVACTDCQSP AEKR
Subjt:  AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G20390.1 unknown protein5.8e-6164.97Show/hide
Query:  MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL
        M A+R  S FK S T +  + A          G   S+GRKAVSFVL+TVTGGVALSALDDL+IY  CSSKA+EK  N++ +I+AIGEPI KGPWYNASL
Subjt:  MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL

Query:  AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPA
        AV+H+RHS+SC+FPV GPQGTGI+ LKAVRNGEDS   FL+ RDWDILIMDAL+HVP NEG QQT+RIN+T+   P+
Subjt:  AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPA
AT2G20390.2 unknown protein1.6e-5553.99Show/hide
Query:  MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL
        M A+R  S FK S T +  + A          G   S+GRKAVSFVL+TVTGGVALSALDDL+IY  CSSKA+EK  N++ +I+AIGEPI KGPWYNASL
Subjt:  MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASL

Query:  AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNG------------------------------------EDSWISFLRPRDWDILIMDALLHVPENEGKQQ
        AV+H+RHS+SC+FPV GPQGTGI+ LKAVRNG                                    EDS   FL+ RDWDILIMDAL+HVP NEG QQ
Subjt:  AVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNG------------------------------------EDSWISFLRPRDWDILIMDALLHVPENEGKQQ

Query:  TMRINLTEKFAPA
        T+RIN+T+   P+
Subjt:  TMRINLTEKFAPA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGCGAAGAGGTTGCTTTCCATATTCAAGCGCTCTCCAACTCCGAACGCTTCCAGGGTTGCTTGCAGCAGTTCCGTAAGGCCATCGGAGGAAGGGGTGAATAAATC
CTGGGGTCGCAAAGCAGTCTCCTTTGTACTTGTTACTGTTACTGGTGGTGTAGCCTTGAGTGCTTTAGATGACCTCGCCATTTATCATAGCTGTAGCAGCAAAGCCATAG
AGAAAGCCAAGAACAATAGAGCAATTATAGATGCTATTGGAGAACCCATTGTTAAAGGTCCATGGTACAATGCATCACTTGCAGTAGCTCATAAGAGACATTCTCTATCC
TGCACGTTTCCGGTATCAGGACCCCAAGGCACGGGGATCGTCCAACTGAAGGCAGTTCGTAATGGAGAGGACTCCTGGATATCGTTTCTCCGGCCACGAGACTGGGACAT
CCTGATCATGGATGCTCTCCTACATGTTCCCGAAAACGAAGGTAAGCAGCAAACAATGCGTATTAATCTCACTGAGAAGTTTGCCCCTGCTGCTGCTGCTTGTGTCGCAT
GCACTGATTGTCAGTCTCCGGAGGCAGAGAAGAGATGA
mRNA sequenceShow/hide mRNA sequence
TCTATTAAATTAAGGGTTGGAATTTCAAGTTTTGATTTTATATCTTTCATTTGACAAGTCTGCTCAAAATCAGCCGACAATTTTTTTAGGGAAGATTTCTATCGAGAAAG
CGCGGCAGAACGATTTTGCGGTGAGCGGCTGAGGGAACGAAGAACCCACAAGCTGAAAATGCTGGCGAAGAGGTTGCTTTCCATATTCAAGCGCTCTCCAACTCCGAACG
CTTCCAGGGTTGCTTGCAGCAGTTCCGTAAGGCCATCGGAGGAAGGGGTGAATAAATCCTGGGGTCGCAAAGCAGTCTCCTTTGTACTTGTTACTGTTACTGGTGGTGTA
GCCTTGAGTGCTTTAGATGACCTCGCCATTTATCATAGCTGTAGCAGCAAAGCCATAGAGAAAGCCAAGAACAATAGAGCAATTATAGATGCTATTGGAGAACCCATTGT
TAAAGGTCCATGGTACAATGCATCACTTGCAGTAGCTCATAAGAGACATTCTCTATCCTGCACGTTTCCGGTATCAGGACCCCAAGGCACGGGGATCGTCCAACTGAAGG
CAGTTCGTAATGGAGAGGACTCCTGGATATCGTTTCTCCGGCCACGAGACTGGGACATCCTGATCATGGATGCTCTCCTACATGTTCCCGAAAACGAAGGTAAGCAGCAA
ACAATGCGTATTAATCTCACTGAGAAGTTTGCCCCTGCTGCTGCTGCTTGTGTCGCATGCACTGATTGTCAGTCTCCGGAGGCAGAGAAGAGATGAAGTCAGCTATTAAG
TTTGCAGCTTCTTATTAGTTTTCTGTCCCGAAATGATTTCGAGCTGACCGAAGGATTAAAATATTCGTTATATGCATCAAAATAATATTTTTCTGTGGACTGCTTCGTCC
AAATGCCTTCTAGTTCTAGGTGGAACCAGCTTAGAAGATTATTATCCAACAAGATTGCTAACATCAATCACTCTGTTTTTTATTTCATTTTTTGTATGGATAGCGTTCAT
GTTATGGGCGCTGACATAAACTTTCATTTATACCACTTACTGAGATTTCACTATA
Protein sequenceShow/hide protein sequence
MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASLAVAHKRHSLS
CTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR