; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg11540 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11540
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTPR_REGION domain-containing protein
Genome locationCarg_Chr17:9622341..9623758
RNA-Seq ExpressionCarg11540
SyntenyCarg11540
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0009833 - plant-type primary cell wall biogenesis (biological process)
GO:0030244 - cellulose biosynthetic process (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0016759 - cellulose synthase activity (molecular function)
InterPro domainsIPR003107 - HAT (Half-A-TPR) repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039891.1 TPR_11 domain-containing protein [Cucumis melo var. makuwa]5.3e-12371.27Show/hide
Query:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSLFAFRCNNKPL-------------SFSDHHRA-APTGFRRTHSEGNLITLSHASDVIDVHEDP
        MLL+SSSTPLL SLLPPDH HHH+D VGKHSP    S F F CNNKPL             SFSDHHRA AP+GFRRT+SEGNL T+SHAS+VIDVHEDP
Subjt:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSLFAFRCNNKPL-------------SFSDHHRA-APTGFRRTHSEGNLITLSHASDVIDVHEDP

Query:  FSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNS-GDGIGFVGDL
        FS DS NFK SNK S    RS+L+TIPSFSFYGSR RTEE+++E++D+  D EE+E  L NFG+    +AA++TP VRAMEQAW+R+ + GDG+GF GDL
Subjt:  FSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNS-GDGIGFVGDL

Query:  QKEMHLAR--GPGGGGGGGGGGGRRRS--GGGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKL---GKGDVRGAEEYYSRAILMDCSQDGE
        +KEM+LAR  G GGG G GGGGGR  S  GGGGGGE++GMEEYYKKMVVENPGNALVLSNYAEFLY+A +      KGD+  AEEYYSRAILMD SQDGE
Subjt:  QKEMHLAR--GPGGGGGGGGGGGRRRS--GGGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKL---GKGDVRGAEEYYSRAILMDCSQDGE

Query:  ILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMAT
        ILSKYAKLVWELH DQQKA SYFQRALQASPHDSHVQAAYANFLWETEE ED +S+GKE AT
Subjt:  ILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMAT

KAG6576080.1 hypothetical protein SDJN03_26719, partial [Cucurbita argyrosperma subsp. sororia]1.9e-13699.6Show/hide
Query:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSLFAFRCNNKPLSFSDHHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKL
        MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHS FAFRCNNKPLSFSDHHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKL
Subjt:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSLFAFRCNNKPLSFSDHHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKL

Query:  SHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIGFVGDLQKEMHLARGPGGGGG
        SHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIGFVGDLQKEMHLARGPGGGGG
Subjt:  SHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIGFVGDLQKEMHLARGPGGGGG

Query:  GGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKL
        GGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKL
Subjt:  GGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKL

KAG7014598.1 hypothetical protein SDJN02_24777, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-196100Show/hide
Query:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSLFAFRCNNKPLSFSDHHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKL
        MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSLFAFRCNNKPLSFSDHHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKL
Subjt:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSLFAFRCNNKPLSFSDHHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKL

Query:  SHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIGFVGDLQKEMHLARGPGGGGG
        SHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIGFVGDLQKEMHLARGPGGGGG
Subjt:  SHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIGFVGDLQKEMHLARGPGGGGG

Query:  GGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLGKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQKASSY
        GGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLGKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQKASSY
Subjt:  GGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLGKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQKASSY

Query:  FQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMATDLHGSCNSLT
        FQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMATDLHGSCNSLT
Subjt:  FQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMATDLHGSCNSLT

XP_008459965.1 PREDICTED: uncharacterized protein LOC103498923 [Cucumis melo]1.6e-12472.42Show/hide
Query:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSLFAFRCNNKPL-------------SFSDHHRA-APTGFRRTHSEGNLITLSHASDVIDVHEDP
        MLL+SSSTPLL SLLPPDH HHH+D VGKHSP    S F F CNNKPL             SFSDHHRA AP+GFRRT+SEGNL T+SHAS+VIDVHEDP
Subjt:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSLFAFRCNNKPL-------------SFSDHHRA-APTGFRRTHSEGNLITLSHASDVIDVHEDP

Query:  FSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNS-GDGIGFVGDL
        FS DS NFK SNK S    RSVL+TIPSFSFYGSR RTEE+++E++D+  D EE+E  L NFG+    +AA++TP VRAMEQAW+R+ + GDGIGFVGDL
Subjt:  FSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNS-GDGIGFVGDL

Query:  QKEMHLAR--GPGGGGGGGGGGGRRRS--GGGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLGKGDVRGAEEYYSRAILMDCSQDGEILS
        +KEM+LAR  G GGG G GGGGGR  +  GGGGGGE++GMEEYYKKMVVENPGNALVLSNYAEFLY+      KGD+R AEEYYSRAILMD SQDGEILS
Subjt:  QKEMHLAR--GPGGGGGGGGGGGRRRS--GGGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLGKGDVRGAEEYYSRAILMDCSQDGEILS

Query:  KYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMAT
        KYAKLVWELH DQQKA SYFQRALQASPHDSHVQAAYANFLWETEE ED +S+GKE AT
Subjt:  KYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMAT

XP_038874350.1 uncharacterized protein LOC120067050 isoform X1 [Benincasa hispida]3.3e-12575.28Show/hide
Query:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSLFAFRCNNKPLSF--------SDHHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSF
        MLL+SSSTPLL SLLPPD   HHHD V KHS SPS   FAF CNNK LSF        S    A PTGFRRTHSEGNL TLSHA DVIDVHEDPFSFDSF
Subjt:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSLFAFRCNNKPLSF--------SDHHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSF

Query:  NFKPSNKLSHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRM--DAAIVTPGVRAMEQAWTRMNSGDGIGFVGDLQKEMH
        NFKPSN  SH   RS+L+TIPSFSFY SRART EEDD+DDDQH DPEEDE  L +FG+ NRM  DAAIVTP V+AME AWT     DGIGFVGD QKEM+
Subjt:  NFKPSNKLSHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRM--DAAIVTPGVRAMEQAWTRMNSGDGIGFVGDLQKEMH

Query:  LARGPG-GGGGGGGGGGRRRS--GGGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLGKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLV
        L    G GG G GGGGGRR S  GGGGGGEQHGMEEYYKKMV+ENPGNALVLSNYAEFLYQ R     GD+RGAEEYYSRAILMD +QDGEILSKYAKLV
Subjt:  LARGPG-GGGGGGGGGGRRRS--GGGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLGKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLV

Query:  WELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMATDLH
        WELH DQQKA +YFQRALQASPHDS+VQAAYANFLWETEE ED  SLGK MAT  +
Subjt:  WELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMATDLH

TrEMBL top hitse value%identityAlignment
A0A0A0KA70 TPR_REGION domain-containing protein9.1e-10570.18Show/hide
Query:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSLFAFRCNNKPLS-------------FSDHHR-AAPTGFRRTHSEGNLITLSHASDVIDVHEDP
        MLL+SSSTPLL SLLPPD  HHHHD  GKHSP    S F F CNNKPLS             FSDHHR AAP+GFRRT+SEGNL T+SHASDVIDVHEDP
Subjt:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSLFAFRCNNKPLS-------------FSDHHR-AAPTGFRRTHSEGNLITLSHASDVIDVHEDP

Query:  FSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNS-GDGIGFVGDL
        FSFDS NFK S K  H   RS+L+TIPSFSFYGSRARTEEE +E++D+  D +E+E  L NF +    DAAIVTP VRAMEQAW+R+ + GDG+GFVGDL
Subjt:  FSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNS-GDGIGFVGDL

Query:  QKEMHLAR--GPGGGGGGGGGGGRRR--SGGGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLGKGDVRGAEEYYSRAILMDCSQDGEILS
        +KEM+LAR  G GGG G GGGGGR +   GGGGGGE++GMEEYYKKMVVENP NALVLSNYAEFLYQ      KGD+  AEEYYSRAILMD S DGE LS
Subjt:  QKEMHLAR--GPGGGGGGGGGGGRRR--SGGGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLGKGDVRGAEEYYSRAILMDCSQDGEILS

Query:  KYAKLVWELHRDQQKASSYFQRALQASPHDSH
        KYAKLVWELH DQQKA SYFQRALQASP D +
Subjt:  KYAKLVWELHRDQQKASSYFQRALQASPHDSH

A0A1S3CCM7 uncharacterized protein LOC1034989238.0e-12572.42Show/hide
Query:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSLFAFRCNNKPL-------------SFSDHHRA-APTGFRRTHSEGNLITLSHASDVIDVHEDP
        MLL+SSSTPLL SLLPPDH HHH+D VGKHSP    S F F CNNKPL             SFSDHHRA AP+GFRRT+SEGNL T+SHAS+VIDVHEDP
Subjt:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSLFAFRCNNKPL-------------SFSDHHRA-APTGFRRTHSEGNLITLSHASDVIDVHEDP

Query:  FSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNS-GDGIGFVGDL
        FS DS NFK SNK S    RSVL+TIPSFSFYGSR RTEE+++E++D+  D EE+E  L NFG+    +AA++TP VRAMEQAW+R+ + GDGIGFVGDL
Subjt:  FSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNS-GDGIGFVGDL

Query:  QKEMHLAR--GPGGGGGGGGGGGRRRS--GGGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLGKGDVRGAEEYYSRAILMDCSQDGEILS
        +KEM+LAR  G GGG G GGGGGR  +  GGGGGGE++GMEEYYKKMVVENPGNALVLSNYAEFLY+      KGD+R AEEYYSRAILMD SQDGEILS
Subjt:  QKEMHLAR--GPGGGGGGGGGGGRRRS--GGGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLGKGDVRGAEEYYSRAILMDCSQDGEILS

Query:  KYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMAT
        KYAKLVWELH DQQKA SYFQRALQASPHDSHVQAAYANFLWETEE ED +S+GKE AT
Subjt:  KYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMAT

A0A4U5QMV6 TPR_REGION domain-containing protein8.7e-6347.33Show/hide
Query:  MLLRSSSTPLLRSLLPP-------DHLHHHHD--AVGKHSP--------SPSHS-----LFAFRCNNKPL--SFSDHHRAAPTGFRRTHSEGNLITLSHA
        MLLRSSSTP+L SLL            +HHHD     KHSP         P H      L    C + P+  S S+    +  GFRR  SEGNL      
Subjt:  MLLRSSSTPLLRSLLPP-------DHLHHHHD--AVGKHSP--------SPSHS-----LFAFRCNNKPL--SFSDHHRAAPTGFRRTHSEGNLITLSHA

Query:  SDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDE-------VALEN--FGVHNRMDAAIVTPGVRAME
          ++D   +      +N   + K+S R    +LETIPSFSF  SR R E+ED+ED+DQ    +E+E       VA EN  FG+ N+M+  ++T  VR M+
Subjt:  SDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDE-------VALEN--FGVHNRMDAAIVTPGVRAME

Query:  QAWTRMNSGDGIGFVGDLQKEMHLARGPG------GGGGGGGGGGRRRSGGG-----GGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLGKG
        + +  +N  +   ++G+   EMHLARGPG      G GGGGG GGR   G G     GGG+ HG EEYYK+MV ENPGN L L NYA+FLYQ      K 
Subjt:  QAWTRMNSGDGIGFVGDLQKEMHLARGPG------GGGGGGGGGGRRRSGGG-----GGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLGKG

Query:  DVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYED
        D++GAEEYYSRAIL D  +DGEILS+Y KLVWELH+DQ +ASSYF+R +QASP D HV AAYA+FLWETE+ +D
Subjt:  DVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYED

A0A5A7TE10 TPR_11 domain-containing protein2.6e-12371.27Show/hide
Query:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSLFAFRCNNKPL-------------SFSDHHRA-APTGFRRTHSEGNLITLSHASDVIDVHEDP
        MLL+SSSTPLL SLLPPDH HHH+D VGKHSP    S F F CNNKPL             SFSDHHRA AP+GFRRT+SEGNL T+SHAS+VIDVHEDP
Subjt:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSLFAFRCNNKPL-------------SFSDHHRA-APTGFRRTHSEGNLITLSHASDVIDVHEDP

Query:  FSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNS-GDGIGFVGDL
        FS DS NFK SNK S    RS+L+TIPSFSFYGSR RTEE+++E++D+  D EE+E  L NFG+    +AA++TP VRAMEQAW+R+ + GDG+GF GDL
Subjt:  FSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNS-GDGIGFVGDL

Query:  QKEMHLAR--GPGGGGGGGGGGGRRRS--GGGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKL---GKGDVRGAEEYYSRAILMDCSQDGE
        +KEM+LAR  G GGG G GGGGGR  S  GGGGGGE++GMEEYYKKMVVENPGNALVLSNYAEFLY+A +      KGD+  AEEYYSRAILMD SQDGE
Subjt:  QKEMHLAR--GPGGGGGGGGGGGRRRS--GGGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKL---GKGDVRGAEEYYSRAILMDCSQDGE

Query:  ILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMAT
        ILSKYAKLVWELH DQQKA SYFQRALQASPHDSHVQAAYANFLWETEE ED +S+GKE AT
Subjt:  ILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMAT

B9GRD4 TPR_REGION domain-containing protein5.1e-6347.21Show/hide
Query:  MLLRSSSTPLLRSLLPP-------DHLHHHHD--AVGKHSP--------SPSHS-----LFAFRCNNKPL--SFSDHHRAAPTGFRRTHSEGNLITLSHA
        MLLRSSSTP+L SLL            +HHHD     KHSP         P H      L    CN+ P+  S S+    +  GFRR  SEGNL      
Subjt:  MLLRSSSTPLLRSLLPP-------DHLHHHHD--AVGKHSP--------SPSHS-----LFAFRCNNKPL--SFSDHHRAAPTGFRRTHSEGNLITLSHA

Query:  SDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDE-------VALEN--FGVHNRMDAAIVTPGVRAME
          ++D   +      +N   + K+S R    +LETIPSFS+   R R E+ED+ED+DQ    +E+E       VA EN  FG+ N+M+  ++T  VR M+
Subjt:  SDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDE-------VALEN--FGVHNRMDAAIVTPGVRAME

Query:  QAWTRMNSGDGIGFVGD---LQKEMHLARGPG------GGGGGGGGGGRRRSGGG-----GGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKL
        + W+       + F G    + +EMHLARGPG      G GGGGG GGR   G G     GGG+ HG EEYYKKMV ENPGN L L NYA+FLYQ     
Subjt:  QAWTRMNSGDGIGFVGD---LQKEMHLARGPG------GGGGGGGGGGRRRSGGG-----GGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKL

Query:  GKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYED
         K D++GAEEYYSRAIL D  +DGEILS+Y KLVWELH+DQ +ASSYF+R +QASP D HV AAYA+FLWETE+ +D
Subjt:  GKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04530.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.7e-2148.28Show/hide
Query:  GGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLGKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHV
        G +     +YYK M+ E P + L+L NYA+FL        KGD+ GAEEYY +  +++ S DG  L+ Y +LV +LH+D+ KA SYF+RA+QASP DS V
Subjt:  GGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLGKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHV

Query:  QAAYANFLWETEEYED
         AAYA+FLWE    +D
Subjt:  QAAYANFLWETEEYED

AT1G80130.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.1e-2445.33Show/hide
Query:  GGGGGGGGGGGRRRSGGG--------GGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLGKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLV
        GGGGG GG GG   +GGG        GG  +   + YY++M+  NPGN+L+  NYA+FL +      KGD++ AEEY  RAIL + + DG +LS YA L+
Subjt:  GGGGGGGGGGGRRRSGGG--------GGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLGKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLV

Query:  WELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKE
           H+D+Q+A SY+++A++ SP D +VQA+YA FLW+ +E E+  +LG+E
Subjt:  WELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKE

AT4G17940.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.6e-2443.4Show/hide
Query:  RMNSGDGIGFVGDLQKEMHLARGPGGGGGGGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLGKGDVRGAEEYYSRAILM
        R   G G    G L  E     G G GGG G  GG    GGGG  ++  + +YY++M+  NP N+L+L NY +FLY+        D  GAEEYY RAIL 
Subjt:  RMNSGDGIGFVGDLQKEMHLARGPGGGGGGGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLGKGDVRGAEEYYSRAILM

Query:  DCSQDGEILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYED
        +   DGE LS Y +L+WE  RD+++A  YF +A+ ASP+D  V  +YA F+WE E+ +D
Subjt:  DCSQDGEILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYED

AT4G32340.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.0e-2348.48Show/hide
Query:  GGGGGGGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLGKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQ
        GG  GG GG G   +GGGGGG    ++ YY++M+   PG+ L+LSNYA FL +      KGD R AEEY  RA+L +  +DGE+LS Y  L+W+ H D  
Subjt:  GGGGGGGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLGKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQ

Query:  KASSYFQRALQASPHDSHVQAAYANFLWETEE
        +A SY+ +A+Q+SP D +V A+YA FLW+ EE
Subjt:  KASSYFQRALQASPHDSHVQAAYANFLWETEE

AT5G20190.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.2e-2545.68Show/hide
Query:  RMNSGDGIGFVGDLQKEMHLARGPGGGGGGGGGGGRRRSGG---GGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLGKGDVRGAEEYYSRA
        R +S DGI +  D   E+      GGGGG   GGG+ RSGG   GG G     + +Y+KM+  NPGN + LSNYA+FL + R      D   AEEY  RA
Subjt:  RMNSGDGIGFVGDLQKEMHLARGPGGGGGGGGGGGRRRSGG---GGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLGKGDVRGAEEYYSRA

Query:  ILMDCSQDGEILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYED
        IL+    DG +L+ YA+LVW++H+D  +A +YF +A+ A+P D +VQA+YA FLW+ EE E+
Subjt:  ILMDCSQDGEILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCTCAGAAGCTCTTCTACGCCGCTTCTTCGCTCTCTTCTCCCGCCGGACCACCTCCATCACCACCATGATGCCGTCGGGAAACACTCCCCTTCCCCCTCCCATTC
CCTCTTCGCCTTTCGCTGTAACAATAAACCCCTTTCTTTCTCCGACCACCATCGCGCTGCTCCCACTGGCTTTCGGAGAACCCACTCCGAAGGAAATTTGATTACCCTTT
CTCATGCTTCTGATGTAATCGATGTCCATGAAGACCCTTTTTCATTTGATTCATTCAATTTCAAACCCTCCAATAAACTCAGTCACAGGCCTAACCGGTCCGTTCTCGAG
ACCATACCTTCGTTTTCCTTCTACGGTTCCAGAGCCAGGACTGAAGAAGAAGATGACGAAGACGATGATCAACATGCTGATCCGGAGGAAGATGAAGTTGCCTTGGAGAA
TTTTGGCGTCCATAACAGGATGGACGCTGCCATTGTAACTCCGGGGGTTAGGGCCATGGAACAAGCTTGGACCAGAATGAATTCAGGAGATGGGATTGGGTTTGTGGGTG
ATTTACAGAAAGAGATGCATCTGGCGAGAGGGCCAGGTGGTGGCGGCGGCGGCGGTGGTGGTGGTGGTCGACGGCGGAGTGGCGGAGGTGGAGGGGGTGAGCAGCATGGC
ATGGAGGAGTATTACAAGAAAATGGTAGTGGAAAATCCAGGGAATGCTCTGGTTTTGAGTAACTATGCGGAGTTCTTGTACCAGGCAAGATCTAAGCTTGGGAAAGGAGA
CGTGCGAGGAGCGGAAGAGTATTACAGCAGAGCCATTTTAATGGATTGTTCCCAAGATGGAGAGATTTTGTCAAAATATGCGAAGTTAGTGTGGGAGTTGCATCGTGACC
AACAAAAAGCTTCATCCTATTTCCAACGGGCTCTCCAAGCTTCTCCACATGACAGCCATGTGCAAGCAGCCTATGCTAATTTCCTGTGGGAAACAGAAGAATATGAGGAT
GGACGCAGCTTAGGAAAAGAAATGGCAACAGACTTACACGGCAGCTGCAACAGCTTGACATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGCTCAGAAGCTCTTCTACGCCGCTTCTTCGCTCTCTTCTCCCGCCGGACCACCTCCATCACCACCATGATGCCGTCGGGAAACACTCCCCTTCCCCCTCCCATTC
CCTCTTCGCCTTTCGCTGTAACAATAAACCCCTTTCTTTCTCCGACCACCATCGCGCTGCTCCCACTGGCTTTCGGAGAACCCACTCCGAAGGAAATTTGATTACCCTTT
CTCATGCTTCTGATGTAATCGATGTCCATGAAGACCCTTTTTCATTTGATTCATTCAATTTCAAACCCTCCAATAAACTCAGTCACAGGCCTAACCGGTCCGTTCTCGAG
ACCATACCTTCGTTTTCCTTCTACGGTTCCAGAGCCAGGACTGAAGAAGAAGATGACGAAGACGATGATCAACATGCTGATCCGGAGGAAGATGAAGTTGCCTTGGAGAA
TTTTGGCGTCCATAACAGGATGGACGCTGCCATTGTAACTCCGGGGGTTAGGGCCATGGAACAAGCTTGGACCAGAATGAATTCAGGAGATGGGATTGGGTTTGTGGGTG
ATTTACAGAAAGAGATGCATCTGGCGAGAGGGCCAGGTGGTGGCGGCGGCGGCGGTGGTGGTGGTGGTCGACGGCGGAGTGGCGGAGGTGGAGGGGGTGAGCAGCATGGC
ATGGAGGAGTATTACAAGAAAATGGTAGTGGAAAATCCAGGGAATGCTCTGGTTTTGAGTAACTATGCGGAGTTCTTGTACCAGGCAAGATCTAAGCTTGGGAAAGGAGA
CGTGCGAGGAGCGGAAGAGTATTACAGCAGAGCCATTTTAATGGATTGTTCCCAAGATGGAGAGATTTTGTCAAAATATGCGAAGTTAGTGTGGGAGTTGCATCGTGACC
AACAAAAAGCTTCATCCTATTTCCAACGGGCTCTCCAAGCTTCTCCACATGACAGCCATGTGCAAGCAGCCTATGCTAATTTCCTGTGGGAAACAGAAGAATATGAGGAT
GGACGCAGCTTAGGAAAAGAAATGGCAACAGACTTACACGGCAGCTGCAACAGCTTGACATGAAAGTGAATGCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTTCTTGGCT
TCTGTAAGCATTTTCAAAGTTGTTCCATGTCT
Protein sequenceShow/hide protein sequence
MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSLFAFRCNNKPLSFSDHHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSVLE
TIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIGFVGDLQKEMHLARGPGGGGGGGGGGGRRRSGGGGGGEQHG
MEEYYKKMVVENPGNALVLSNYAEFLYQARSKLGKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYED
GRSLGKEMATDLHGSCNSLT