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Carg11546 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11546
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEmbryo sac development arrest protein
Genome locationCarg_Chr17:9671890..9672282
RNA-Seq ExpressionCarg11546
SyntenyCarg11546
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039884.1 uncharacterized protein E6C27_scaffold122G001610 [Cucumis melo var. makuwa]4.1e-3660.38Show/hide
Query:  MRLPPRRLMTSDGP--SSRPNKRKERKGFDDE--------AHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWD-HPDVSMA----------
        MRLPPRRLMTS  P  ++  NKRKER+G DD+        AHQLSFTAKV  PTPP S  LLAGYLAHEF TKGTLFGQ WD +PD + A          
Subjt:  MRLPPRRLMTSDGP--SSRPNKRKERKGFDDE--------AHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWD-HPDVSMA----------

Query:  -----ASPPDLNEKRQAEL---HPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARSLNL
              +  +  EKRQA+    H KNYQSYVEVANLLKH G+H QGIVNPTQLAR LNL
Subjt:  -----ASPPDLNEKRQAEL---HPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARSLNL

KAG6576089.1 Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]6.2e-6196.67Show/hide
Query:  MRLPPRRLMTSDGPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWDHPDVSMAASPPDLNEKRQAELHPKNYQS
        MRLPPRRLMTSDGPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWDHPDVSMAASPPDLNEKRQAELHPKNYQS
Subjt:  MRLPPRRLMTSDGPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWDHPDVSMAASPPDLNEKRQAELHPKNYQS

Query:  YVEVANLLKHGGAHFQGIVN
        YVEVANLLKHGGAHFQ  ++
Subjt:  YVEVANLLKHGGAHFQGIVN

KAG7014604.1 hypothetical protein SDJN02_24783, partial [Cucurbita argyrosperma subsp. argyrosperma]8.1e-69100Show/hide
Query:  MRLPPRRLMTSDGPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWDHPDVSMAASPPDLNEKRQAELHPKNYQS
        MRLPPRRLMTSDGPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWDHPDVSMAASPPDLNEKRQAELHPKNYQS
Subjt:  MRLPPRRLMTSDGPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWDHPDVSMAASPPDLNEKRQAELHPKNYQS

Query:  YVEVANLLKHGGAHFQGIVNPTQLARSLNL
        YVEVANLLKHGGAHFQGIVNPTQLARSLNL
Subjt:  YVEVANLLKHGGAHFQGIVNPTQLARSLNL

XP_011656778.1 uncharacterized protein LOC105435768 [Cucumis sativus]1.6e-3762.5Show/hide
Query:  MRLPPRRLMTSDGPSSRPNKRKERKGF-----DDEAHQLSFTAKVSKPTP-PQSNHLLAGYLAHEFFTKGTLFGQAWDHPD-----------------VS
        MRLPPRRLMTS  P+   NKRKER+G      DDEAHQL  TAKV KPTP P S  LLAGYLAHEF TKGTLFGQ WD+PD                  S
Subjt:  MRLPPRRLMTSDGPSSRPNKRKERKGF-----DDEAHQLSFTAKVSKPTP-PQSNHLLAGYLAHEFFTKGTLFGQAWDHPD-----------------VS

Query:  MAASPP---DLNEKRQAEL---HP-KNYQSYVEVANLLKHGGAHFQGIVNPTQLARSLNL
         ++SPP   +  EKRQAE    HP KNYQSYVEVANLLKH G H +GIVNPTQLAR LNL
Subjt:  MAASPP---DLNEKRQAEL---HP-KNYQSYVEVANLLKHGGAHFQGIVNPTQLARSLNL

XP_038906548.1 uncharacterized protein LOC120092519 [Benincasa hispida]5.1e-4775.54Show/hide
Query:  MRLPPRRLMTSDGPSSRPNKRKERKGF-DDEAHQLSFTAKVSKPTPP----QSNHLLAGYLAHEFFTKGTLFGQAWDHPDVSM----AASPPDLNEKRQA
        MRLPPRRLMTS  P  RP KRKER+G  DDEAHQLS TAKV KP PP     SNHLLAGYLAHEF TKGTLFGQAWD PD +M    A+SP + +EK Q 
Subjt:  MRLPPRRLMTSDGPSSRPNKRKERKGF-DDEAHQLSFTAKVSKPTPP----QSNHLLAGYLAHEFFTKGTLFGQAWDHPDVSM----AASPPDLNEKRQA

Query:  ELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARSLNL
        ELHPKNYQSYVEVANLLKH G HFQGIVNPTQLAR LNL
Subjt:  ELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARSLNL

TrEMBL top hitse value%identityAlignment
A0A0A0KDC0 Uncharacterized protein8.0e-3862.5Show/hide
Query:  MRLPPRRLMTSDGPSSRPNKRKERKGF-----DDEAHQLSFTAKVSKPTP-PQSNHLLAGYLAHEFFTKGTLFGQAWDHPD-----------------VS
        MRLPPRRLMTS  P+   NKRKER+G      DDEAHQL  TAKV KPTP P S  LLAGYLAHEF TKGTLFGQ WD+PD                  S
Subjt:  MRLPPRRLMTSDGPSSRPNKRKERKGF-----DDEAHQLSFTAKVSKPTP-PQSNHLLAGYLAHEFFTKGTLFGQAWDHPD-----------------VS

Query:  MAASPP---DLNEKRQAEL---HP-KNYQSYVEVANLLKHGGAHFQGIVNPTQLARSLNL
         ++SPP   +  EKRQAE    HP KNYQSYVEVANLLKH G H +GIVNPTQLAR LNL
Subjt:  MAASPP---DLNEKRQAEL---HP-KNYQSYVEVANLLKHGGAHFQGIVNPTQLARSLNL

A0A1S3CBD7 uncharacterized protein LOC1034989152.6e-3660Show/hide
Query:  MRLPPRRLMTSDGP--SSRPNKRKERKGFDDE--------AHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWD-HPDVSMA----------
        MRLPPRRLMTS  P  ++  NKRKER+G DD+        AHQLSFTAKV  PTPP S  LLAGYLAHEF TKGTLFGQ WD +PD + A          
Subjt:  MRLPPRRLMTSDGP--SSRPNKRKERKGFDDE--------AHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWD-HPDVSMA----------

Query:  ------ASPPDLNEKRQAEL---HPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARSLNL
               +  +  EKRQA+    H KNYQSYVEVANLLKH G+H QGIVNPTQLAR LNL
Subjt:  ------ASPPDLNEKRQAEL---HPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARSLNL

A0A5A7T8V2 Uncharacterized protein2.0e-3660.38Show/hide
Query:  MRLPPRRLMTSDGP--SSRPNKRKERKGFDDE--------AHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWD-HPDVSMA----------
        MRLPPRRLMTS  P  ++  NKRKER+G DD+        AHQLSFTAKV  PTPP S  LLAGYLAHEF TKGTLFGQ WD +PD + A          
Subjt:  MRLPPRRLMTSDGP--SSRPNKRKERKGFDDE--------AHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWD-HPDVSMA----------

Query:  -----ASPPDLNEKRQAEL---HPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARSLNL
              +  +  EKRQA+    H KNYQSYVEVANLLKH G+H QGIVNPTQLAR LNL
Subjt:  -----ASPPDLNEKRQAEL---HPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARSLNL

A0A5B6UNG4 Embryo sac development arrest protein2.9e-2453.38Show/hide
Query:  MRLPPRRLMTSDGPSSRP-NKRKERKGFDDEAHQLSFTAKVSKPTPPQ------SNHLLAGYLAHEFFTKGTLFGQAWD--HPDVSMAASPPDLNEKRQ-
        MRLPPRR+     P S P NKRKER GFD     L+     SKPT P       SNHLLAGYLAHEF T GTLFGQ WD   P  S A S   + EK + 
Subjt:  MRLPPRRLMTSDGPSSRP-NKRKERKGFDDEAHQLSFTAKVSKPTPPQ------SNHLLAGYLAHEFFTKGTLFGQAWD--HPDVSMAASPPDLNEKRQ-

Query:  --------AELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARSLNL
                AE  PK +Q YVEVA+LLK  GAH  GIVNPTQL+R L +
Subjt:  --------AELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARSLNL

A0A7J9KLD4 Uncharacterized protein (Fragment)1.0e-2454.86Show/hide
Query:  MRLPPRRLMTSDGPSSRP-NKRKERKGFDDEAH-QLSFTAKVSKPTPPQ---SNHLLAGYLAHEFFTKGTLFGQAWD--HPDVSMAASPPDLNEKRQ---
        MRLPPRR+     P S P NKRKER GFD ++   L  ++K   PT P    SNHLLAGYLAHEF T GTLFGQ WD   P  S A S   + EK +   
Subjt:  MRLPPRRLMTSDGPSSRP-NKRKERKGFDDEAH-QLSFTAKVSKPTPPQ---SNHLLAGYLAHEFFTKGTLFGQAWD--HPDVSMAASPPDLNEKRQ---

Query:  ------AELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARSL
              AE  PK +Q YVEVA+LLK  GAHF GIVNPTQL+R L
Subjt:  ------AELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04000.1 unknown protein4.5e-1738.71Show/hide
Query:  MRLPPRRLMTSDGPSSRPNKRKERKGF-----DDEAHQLSFTAKVSKPTPPQSNH------------------LLAGYLAHEFFTKGTLFGQAWDHPDVS
        MRLPPRR++T+D       KRKER  F     D+      F +   K  PP  N                   +LAGYL+HE+ T+GTLFG+ W+     
Subjt:  MRLPPRRLMTSDGPSSRPNKRKERKGF-----DDEAHQLSFTAKVSKPTPPQSNH------------------LLAGYLAHEFFTKGTLFGQAWDHPDVS

Query:  MAAS--PPDLNEKRQAELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARSLNL
          +S   P    +   E  PK  + Y EVANLL+  GA   GIVNP QLAR L L
Subjt:  MAAS--PPDLNEKRQAELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARSLNL

AT3G23440.1 embryo sac development arrest 61.4e-1040.7Show/hide
Query:  NHLLAGYLAHEFFTKGTLFGQ----AWDHPDVSMAASPPDLNEKRQAELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARSLNL
        N LLAGY+AHE+ T GT+ G+     W      ++ SP    E ++A       QSY EVA++ K  G H  G+VNPTQLA+ + +
Subjt:  NHLLAGYLAHEFFTKGTLFGQ----AWDHPDVSMAASPPDLNEKRQAELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARSLNL

AT5G44060.1 unknown protein1.4e-1538.1Show/hide
Query:  MRLPPRRLMTSD-----------GPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWD------HPDVSMAASPP
        MRLPPRR+ +              P   P K   +K       + + TA V+   P  SN LLAGYLAHEF   GTLFG+ W+       P  + +  P 
Subjt:  MRLPPRRLMTSD-----------GPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWD------HPDVSMAASPP

Query:  DLNEKRQAELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARSLNL
                E      + YVEVAN+L+  G H  GIVNP+QLAR L L
Subjt:  DLNEKRQAELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARSLNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTTTACCTCCTCGTAGATTAATGACCTCAGATGGGCCCAGTTCCAGGCCCAATAAGAGGAAAGAGAGAAAGGGCTTTGATGATGAGGCCCACCAACTGTCATTCAC
AGCTAAAGTATCGAAGCCGACACCGCCTCAATCCAACCACCTCCTAGCCGGCTACTTGGCTCACGAGTTCTTCACCAAAGGCACCCTCTTTGGCCAAGCTTGGGATCATC
CGGATGTGTCTATGGCGGCTTCACCACCTGACCTCAACGAGAAACGCCAAGCCGAGCTGCATCCCAAGAATTACCAGTCCTACGTGGAGGTAGCTAATTTGTTGAAACAC
GGTGGGGCCCACTTTCAAGGTATTGTCAATCCCACCCAGCTAGCTCGGTCGCTAAACCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGTTTACCTCCTCGTAGATTAATGACCTCAGATGGGCCCAGTTCCAGGCCCAATAAGAGGAAAGAGAGAAAGGGCTTTGATGATGAGGCCCACCAACTGTCATTCAC
AGCTAAAGTATCGAAGCCGACACCGCCTCAATCCAACCACCTCCTAGCCGGCTACTTGGCTCACGAGTTCTTCACCAAAGGCACCCTCTTTGGCCAAGCTTGGGATCATC
CGGATGTGTCTATGGCGGCTTCACCACCTGACCTCAACGAGAAACGCCAAGCCGAGCTGCATCCCAAGAATTACCAGTCCTACGTGGAGGTAGCTAATTTGTTGAAACAC
GGTGGGGCCCACTTTCAAGGTATTGTCAATCCCACCCAGCTAGCTCGGTCGCTAAACCTATGA
Protein sequenceShow/hide protein sequence
MRLPPRRLMTSDGPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWDHPDVSMAASPPDLNEKRQAELHPKNYQSYVEVANLLKH
GGAHFQGIVNPTQLARSLNL