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Carg11549 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11549
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCRIB domain-containing protein RIC6-like
Genome locationCarg_Chr17:9694430..9694986
RNA-Seq ExpressionCarg11549
SyntenyCarg11549
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576091.1 Glutathione gamma-glutamylcysteinyltransferase 1, partial [Cucurbita argyrosperma subsp. sororia]6.6e-57100Show/hide
Query:  TCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKK
        TCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKK
Subjt:  TCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKK

Query:  TSRSKPHAADTYKSSHSDPGPNSGTESIS
        TSRSKPHAADTYKSSHSDPGPNSGTESIS
Subjt:  TSRSKPHAADTYKSSHSDPGPNSGTESIS

KAG7014607.1 hypothetical protein SDJN02_24786, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-73100Show/hide
Query:  MNLVRHHRLHPLLIIVPTCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKARRSSKSKESSDKKQSSRGGEEQNE
        MNLVRHHRLHPLLIIVPTCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKARRSSKSKESSDKKQSSRGGEEQNE
Subjt:  MNLVRHHRLHPLLIIVPTCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKARRSSKSKESSDKKQSSRGGEEQNE

Query:  SPNSSLPDIPRHGRRKKTSRSKPHAADTYKSSHSDPGPNSGTESISVSLETTMCQTP
        SPNSSLPDIPRHGRRKKTSRSKPHAADTYKSSHSDPGPNSGTESISVSLETTMCQTP
Subjt:  SPNSSLPDIPRHGRRKKTSRSKPHAADTYKSSHSDPGPNSGTESISVSLETTMCQTP

XP_022953885.1 CRIB domain-containing protein RIC6-like [Cucurbita moschata]1.3e-6097.86Show/hide
Query:  TCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKK
        T ANIKDKNDV TKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKK
Subjt:  TCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKK

Query:  TSRSKPHAADTYKSSHSDPGPNSGTESISVSLETTMCQTP
        TSRSKPHAAD YKSSHSDPGPNSGTESISVSLETTMCQTP
Subjt:  TSRSKPHAADTYKSSHSDPGPNSGTESISVSLETTMCQTP

XP_022991756.1 CRIB domain-containing protein RIC6-like [Cucurbita maxima]2.8e-5592.14Show/hide
Query:  TCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKK
        T ANIKDK+DV TKQA ED+ ESGEKGSN SPDVRPKSSKHRSSSESPTS ERSERHKARRSSKSKESSDKKQSS GGE QNESPNSSLPDIPRHGRRKK
Subjt:  TCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKK

Query:  TSRSKPHAADTYKSSHSDPGPNSGTESISVSLETTMCQTP
        TSRSKPHAADTYKSSHSDPGPNSGTESISVSLE TMCQTP
Subjt:  TSRSKPHAADTYKSSHSDPGPNSGTESISVSLETTMCQTP

XP_023549435.1 CRIB domain-containing protein RIC6-like [Cucurbita pepo subsp. pepo]8.0e-5590.78Show/hide
Query:  PTCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRK
        PT AN KDK++  TKQAGED+ ESGEKGSNSSPDVRPKSSKHRSSSES TS ERSERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRK
Subjt:  PTCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRK

Query:  KTSRSKPHAADTYKSSHSDPGPNSGTESISVSLETTMCQTP
        KTS+SKPHAADTYKSSHSDPGPN+GTESI VSLETTMCQTP
Subjt:  KTSRSKPHAADTYKSSHSDPGPNSGTESISVSLETTMCQTP

TrEMBL top hitse value%identityAlignment
A0A0A0KF43 CRIB domain-containing protein2.2e-1350.34Show/hide
Query:  DKNDVPTKQAGED------DKESGEKGSNSSPDVRPKSSKHRSSS-------ESPTSHER-SERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDI
        +K DV  K   ED       K S     N + DV  K+SKH SSS       ESPT  ER SER K RRSSKSKE      SS      N SP  SLPD+
Subjt:  DKNDVPTKQAGED------DKESGEKGSNSSPDVRPKSSKHRSSS-------ESPTSHER-SERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDI

Query:  PRHGRRKKTSRSKPH-AADTYKSSHSDPGPNSGTESISVSLETTMCQTP
        PR  RRKKT+R+KPH A +TYKS HSDPG  + T SIS+S ++ +CQTP
Subjt:  PRHGRRKKTSRSKPH-AADTYKSSHSDPGPNSGTESISVSLETTMCQTP

A0A1S3CD78 CRIB domain-containing protein RIC6-like3.7e-1350.66Show/hide
Query:  DKNDVPTKQAGEDDKESGEKGSNSS-------PDVRPKSSKHRSSS-------ESPTSHER-SERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPD
        +K DV  K   ED     EKG +SS        DV  K+SKH SSS       +SPT  ER SER K RRSSKSKES     SS      N SP  SLPD
Subjt:  DKNDVPTKQAGEDDKESGEKGSNSS-------PDVRPKSSKHRSSS-------ESPTSHER-SERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPD

Query:  IPRHG-RRKKTSRSKPH-AADTYKSSHSDPGPN-SGTESISVSLETTMCQTP
        +PR   RRKKT+R+KPH A +TYKS +SDPG + + T+SIS+S +T +CQTP
Subjt:  IPRHG-RRKKTSRSKPH-AADTYKSSHSDPGPN-SGTESISVSLETTMCQTP

A0A5A7T9D8 CRIB domain-containing protein RIC6-like3.7e-1350.66Show/hide
Query:  DKNDVPTKQAGEDDKESGEKGSNSS-------PDVRPKSSKHRSSS-------ESPTSHER-SERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPD
        +K DV  K   ED     EKG +SS        DV  K+SKH SSS       +SPT  ER SER K RRSSKSKES     SS      N SP  SLPD
Subjt:  DKNDVPTKQAGEDDKESGEKGSNSS-------PDVRPKSSKHRSSS-------ESPTSHER-SERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPD

Query:  IPRHG-RRKKTSRSKPH-AADTYKSSHSDPGPN-SGTESISVSLETTMCQTP
        +PR   RRKKT+R+KPH A +TYKS +SDPG + + T+SIS+S +T +CQTP
Subjt:  IPRHG-RRKKTSRSKPH-AADTYKSSHSDPGPN-SGTESISVSLETTMCQTP

A0A6J1GQW7 CRIB domain-containing protein RIC6-like6.2e-6197.86Show/hide
Query:  TCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKK
        T ANIKDKNDV TKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKK
Subjt:  TCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKK

Query:  TSRSKPHAADTYKSSHSDPGPNSGTESISVSLETTMCQTP
        TSRSKPHAAD YKSSHSDPGPNSGTESISVSLETTMCQTP
Subjt:  TSRSKPHAADTYKSSHSDPGPNSGTESISVSLETTMCQTP

A0A6J1JRN8 CRIB domain-containing protein RIC6-like1.3e-5592.14Show/hide
Query:  TCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKK
        T ANIKDK+DV TKQA ED+ ESGEKGSN SPDVRPKSSKHRSSSESPTS ERSERHKARRSSKSKESSDKKQSS GGE QNESPNSSLPDIPRHGRRKK
Subjt:  TCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKK

Query:  TSRSKPHAADTYKSSHSDPGPNSGTESISVSLETTMCQTP
        TSRSKPHAADTYKSSHSDPGPNSGTESISVSLE TMCQTP
Subjt:  TSRSKPHAADTYKSSHSDPGPNSGTESISVSLETTMCQTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTAGTACGGCACCATCGATTACATCCGCTCCTTATAATCGTTCCTACTTGTGCAAATATCAAAGACAAAAACGACGTTCCTACAAAACAGGCCGGTGAAGATGA
TAAGGAAAGTGGAGAGAAGGGTTCAAACAGCTCGCCGGACGTGCGGCCTAAATCATCAAAACACCGGTCGTCAAGTGAGTCTCCAACCAGCCATGAAAGATCAGAGAGAC
ACAAAGCAAGACGGTCTTCCAAGTCAAAGGAGAGCTCCGACAAAAAACAAAGCAGCCGAGGAGGGGAGGAGCAGAATGAGTCGCCCAACTCGAGCCTCCCAGACATCCCA
AGACACGGGCGGCGGAAGAAAACGAGCAGATCCAAGCCCCATGCTGCGGATACATACAAGTCCTCGCATTCGGATCCTGGTCCCAACTCTGGAACGGAATCCATATCTGT
ATCCCTGGAAACCACCATGTGTCAGACACCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATTTAGTACGGCACCATCGATTACATCCGCTCCTTATAATCGTTCCTACTTGTGCAAATATCAAAGACAAAAACGACGTTCCTACAAAACAGGCCGGTGAAGATGA
TAAGGAAAGTGGAGAGAAGGGTTCAAACAGCTCGCCGGACGTGCGGCCTAAATCATCAAAACACCGGTCGTCAAGTGAGTCTCCAACCAGCCATGAAAGATCAGAGAGAC
ACAAAGCAAGACGGTCTTCCAAGTCAAAGGAGAGCTCCGACAAAAAACAAAGCAGCCGAGGAGGGGAGGAGCAGAATGAGTCGCCCAACTCGAGCCTCCCAGACATCCCA
AGACACGGGCGGCGGAAGAAAACGAGCAGATCCAAGCCCCATGCTGCGGATACATACAAGTCCTCGCATTCGGATCCTGGTCCCAACTCTGGAACGGAATCCATATCTGT
ATCCCTGGAAACCACCATGTGTCAGACACCTTAG
Protein sequenceShow/hide protein sequence
MNLVRHHRLHPLLIIVPTCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIP
RHGRRKKTSRSKPHAADTYKSSHSDPGPNSGTESISVSLETTMCQTP