CuGenDBv2

Gene ID	Carg11598
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	MADS-box transcription factor 8-like
Genome location	Carg_Chr17:9913236..9913716
RNA-Seq Expression	Carg11598
Synteny	Carg11598
Gene Ontology terms	GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process) GO:0005634 - nucleus (cellular component) GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR002100 - Transcription factor, MADS-box IPR036879 - Transcription factor, MADS-box superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6576135.1 Agamous-like MADS-box protein MADS4, partial [Cucurbita argyrosperma subsp. sororia]

7.1e-27

100

Show/hide

Query:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGNR
        MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGNR
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGNR

KAG6592961.1 Agamous-like MADS-box protein AGL3, partial [Cucurbita argyrosperma subsp. sororia]

8.7e-25

91.94

Show/hide

Query:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGNR
        MGRKKIE+KRIED CNRHVTFCKRR+GLIKKARELSVLCDVEVGLV+FTNRGRLYEFCSG+R
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGNR

KAG7014654.1 Agamous-like MADS-box protein AGL3, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.5e-32

100

Show/hide

Query:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGNREPLRKIDGV
        MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGNREPLRKIDGV
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGNREPLRKIDGV

XP_008459847.1 PREDICTED: MADS-box transcription factor 8-like [Cucumis melo]

2.5e-24

90.16

Show/hide

Query:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN
        MGRKKIEVK IEDRCNRHVTFCKRR+GL+KKARELSVLCDVEVG+++FTNRGRLYEFCSGN
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN

XP_023514717.1 MADS-box protein EJ2-like [Cucurbita pepo subsp. pepo]

2.7e-26

100

Show/hide

Query:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN
        MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CCC5 MADS-box transcription factor 8-like

1.2e-24

90.16

Show/hide

Query:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN
        MGRKKIEVK IEDRCNRHVTFCKRR+GL+KKARELSVLCDVEVG+++FTNRGRLYEFCSGN
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN

A0A6J1DME3 MADS-box protein FLOWERING LOCUS C-like isoform X1

2.7e-24

91.8

Show/hide

Query:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN
        MGRKKIEVKRIED CNRHVTFCKRR+GLIKKARELSVLCDVE+GL+IFTNRGRLYEFC GN
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN

A0A6J1DPA0 MADS-box transcription factor 8-like isoform X3

2.7e-24

91.8

Show/hide

Query:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN
        MGRKKIEVKRIED CNRHVTFCKRR+GLIKKARELSVLCDVE+GL+IFTNRGRLYEFC GN
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN

A0A6J1H7I9 truncated transcription factor CAULIFLOWER D-like

1.6e-24

91.8

Show/hide

Query:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN
        MGRKKIE+KRIED CNRHVTFCKRR+GLIKKARELSVLCDVEVGLV+FTNRGRLYEFCSG+
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN

A0A6J1KPU7 MADS-box protein 04g005320-like

1.2e-24

93.44

Show/hide

Query:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN
        MGRKKIE+KRIED CNRHVTFCKRR+GLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSG+
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN

SwissProt top hits

e value

%identity

Alignment

O04067 Agamous-like MADS-box protein AGL9 homolog

2.2e-18

68.85

Show/hide

Query:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN
        MGR ++E+KRIE++ NR VTF KRR GL+KKA ELSVLCD EV L+IF+NRG+LYEFCS +
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN

P29383 Agamous-like MADS-box protein AGL3

3.3e-19

63.77

Show/hide

Query:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGNREPLRKID
        MGR K+E+KRIE++ NR VTF KRR GL+KKA ELSVLCD E+ L+IF+NRG+LYEFCS      R +D
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGNREPLRKID

Q03489 Agamous-like MADS-box protein AGL9 homolog

2.2e-18

68.85

Show/hide

Query:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN
        MGR ++E+KRIE++ NR VTF KRR GL+KKA ELSVLCD EV L+IF+NRG+LYEFCS +
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN

Q8LLR0 Agamous-like MADS-box protein MADS4

2.2e-18

68.85

Show/hide

Query:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN
        MGR ++E+KRIE++ NR VTF KRR GL+KKA ELSVLCD EV L+IF+NRG+LYEFCS +
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN

Q9SAR1 MADS-box transcription factor 8

5.7e-19

71.67

Show/hide

Query:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSG
        MGR ++E+KRIE++ NR VTF KRR GL+KKA ELSVLCD EV L+IF+NRG+LYEFCSG
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSG

Arabidopsis top hits

e value

%identity

Alignment

AT1G24260.1 K-box region and MADS-box transcription factor family protein

1.5e-19

68.85

Show/hide

Query:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN
        MGR ++E+KRIE++ NR VTF KRR GL+KKA ELSVLCD EV L+IF+NRG+LYEFCS +
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN

AT1G24260.2 K-box region and MADS-box transcription factor family protein

1.5e-19

68.85

Show/hide

Query:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN
        MGR ++E+KRIE++ NR VTF KRR GL+KKA ELSVLCD EV L+IF+NRG+LYEFCS +
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGN

AT2G03710.1 K-box region and MADS-box transcription factor family protein

2.4e-20

63.77

Show/hide

Query:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGNREPLRKID
        MGR K+E+KRIE++ NR VTF KRR GL+KKA ELSVLCD E+ L+IF+NRG+LYEFCS      R +D
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGNREPLRKID

AT2G03710.2 K-box region and MADS-box transcription factor family protein

2.4e-20

63.77

Show/hide

Query:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGNREPLRKID
        MGR K+E+KRIE++ NR VTF KRR GL+KKA ELSVLCD E+ L+IF+NRG+LYEFCS      R +D
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGNREPLRKID

AT2G03710.3 K-box region and MADS-box transcription factor family protein

2.4e-20

63.77

Show/hide

Query:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGNREPLRKID
        MGR K+E+KRIE++ NR VTF KRR GL+KKA ELSVLCD E+ L+IF+NRG+LYEFCS      R +D
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGNREPLRKID

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGACGGAAGAAGATCGAGGTGAAGCGAATCGAAGATAGGTGTAATCGCCATGTGACTTTCTGCAAGAGAAGAGCTGGATTGATAAAGAAGGCCCGAGAGCTCTCTGT
TCTGTGCGACGTTGAAGTCGGACTTGTCATCTTCACCAACCGCGGCCGCCTCTATGAGTTTTGCAGCGGAAACAGAGAACCTCTTAGGAAAATCGATGGGGTTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGRKKIEVKRIEDRCNRHVTFCKRRAGLIKKARELSVLCDVEVGLVIFTNRGRLYEFCSGNREPLRKIDGV

Carg11598 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome