; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg11604 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11604
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCBS domain-containing protein CBSX1, chloroplastic-like
Genome locationCarg_Chr02:2673249..2676227
RNA-Seq ExpressionCarg11604
SyntenyCarg11604
Gene Ontology termsGO:0045454 - cell redox homeostasis (biological process)
GO:0009507 - chloroplast (cellular component)
InterPro domainsIPR000644 - CBS domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605214.1 CBS domain-containing protein CBSX1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]7.2e-69100Show/hide
Query:  MESIGCSLSSLSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT
        MESIGCSLSSLSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT
Subjt:  MESIGCSLSSLSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT

Query:  VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG
        VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG
Subjt:  VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG

KAG7035188.1 CBS domain-containing protein CBSX1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]4.3e-74100Show/hide
Query:  MESIGCSLSSLSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT
        MESIGCSLSSLSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT
Subjt:  MESIGCSLSSLSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT

Query:  VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISGISELSCYC
        VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISGISELSCYC
Subjt:  VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISGISELSCYC

XP_022948196.1 CBS domain-containing protein CBSX1, chloroplastic-like [Cucurbita moschata]3.5e-6899.3Show/hide
Query:  MESIGCSLSSLSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT
        MESIGCSLSSLSLAQFRA SFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT
Subjt:  MESIGCSLSSLSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT

Query:  VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG
        VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG
Subjt:  VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG

XP_023007339.1 CBS domain-containing protein CBSX1, chloroplastic-like [Cucurbita maxima]7.4e-6696.48Show/hide
Query:  MESIGCSLSSLSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT
        MESIGCSLSSLSLAQFRA SFSVQELLF PCRRPSSPIVHASV+RSFSTSCR TGLRKSTSIAA+GTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT
Subjt:  MESIGCSLSSLSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT

Query:  VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG
        VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG
Subjt:  VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG

XP_023532068.1 CBS domain-containing protein CBSX1, chloroplastic-like [Cucurbita pepo subsp. pepo]5.1e-6797.18Show/hide
Query:  MESIGCSLSSLSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT
        MESIGCSLSSLSLAQFRA SFSVQELLFGPCRRPSSPIVHASVARSFSTSCR TGLRKSTS+AA+GTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT
Subjt:  MESIGCSLSSLSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT

Query:  VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG
        VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG
Subjt:  VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG

TrEMBL top hitse value%identityAlignment
A0A0A0LSY7 Uncharacterized protein1.2e-5686.62Show/hide
Query:  MESIGCSLSSLSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT
        MESIGCSLSSLSLA FRA SFSVQE+LFGPCRRPS PI+HASVA+SF        LRKSTSIAASGTLMANSVPS  GVY VGDFMTRKEELHVVKPTT+
Subjt:  MESIGCSLSSLSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT

Query:  VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG
        V+EALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG
Subjt:  VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG

A0A6J1EIL9 CBS domain-containing protein CBSX1, chloroplastic-like8.3e-5582.39Show/hide
Query:  MESIGCSLSSLSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT
        MESIGCS +SLSL QFRANSFS+QELLFGP RRP SPIVHASV++SF  S R    RKSTS++ASGTLMA S PS +GVYTVGDFMTR+EELHVVKPTT 
Subjt:  MESIGCSLSSLSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT

Query:  VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG
        V+EALEILVEKRITGFPVIDDNW LVGVVSDYDLLALDSISG
Subjt:  VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG

A0A6J1G8L0 CBS domain-containing protein CBSX1, chloroplastic-like1.7e-6899.3Show/hide
Query:  MESIGCSLSSLSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT
        MESIGCSLSSLSLAQFRA SFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT
Subjt:  MESIGCSLSSLSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT

Query:  VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG
        VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG
Subjt:  VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG

A0A6J1J6R2 CBS domain-containing protein CBSX1, chloroplastic-like3.4e-5683.8Show/hide
Query:  MESIGCSLSSLSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT
        MESIGCS +SLSLAQFRANSFS+QELLFGP RRP SPIVHASV++SF  S R    RKSTS++ASGTLMANS PS +GVYTVGDFMTR+EELHVVKPTT+
Subjt:  MESIGCSLSSLSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT

Query:  VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG
        V+EALEILVEKRITGFPVIDDNW LVGVVSDYDLLALDSISG
Subjt:  VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG

A0A6J1L4N7 CBS domain-containing protein CBSX1, chloroplastic-like3.6e-6696.48Show/hide
Query:  MESIGCSLSSLSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT
        MESIGCSLSSLSLAQFRA SFSVQELLF PCRRPSSPIVHASV+RSFSTSCR TGLRKSTSIAA+GTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT
Subjt:  MESIGCSLSSLSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTT

Query:  VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG
        VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG
Subjt:  VEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISG

SwissProt top hitse value%identityAlignment
O23193 CBS domain-containing protein CBSX1, chloroplastic6.8e-3058.33Show/hide
Query:  LSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVE
        LS    RA+S      L  P      P    + +RSF +  R      S S AA  TLM NS    +GVYTVG+FMT+KE+LHVVKPTTTV+EALE+LVE
Subjt:  LSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVE

Query:  KRITGFPVIDDNWKLVGVVSDYDLLALDSISG
         RITGFPVID++WKLVG+VSDYDLLALDSISG
Subjt:  KRITGFPVIDDNWKLVGVVSDYDLLALDSISG

O67820 Inosine-5'-monophosphate dehydrogenase6.4e-0447.5Show/hide
Query:  VKPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVSDYDL
        VKP T V+EAL+I+ + +I+G PV+D+  KL+G++++ DL
Subjt:  VKPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVSDYDL

P42851 Inosine-5'-monophosphate dehydrogenase8.4e-0444.64Show/hide
Query:  TVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLA
        TV + MTR  E+  V  +  VEEAL+I++E RI   PV++++ KLVG+++  DL+A
Subjt:  TVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLA

Q9C5D0 CBS domain-containing protein CBSX2, chloroplastic1.7e-2561.82Show/hide
Query:  SFSTSCRSTGLRKST---SIAASGTLMA-------NSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLL
        SFS    S   R ST   SI  S    A       NSVP+ NG YTVGDFMT ++ LHVVKP+T+V++ALE+LVEK++TG PVIDDNW LVGVVSDYDLL
Subjt:  SFSTSCRSTGLRKST---SIAASGTLMA-------NSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLL

Query:  ALDSISGISE
        ALDSISG S+
Subjt:  ALDSISGISE

Arabidopsis top hitse value%identityAlignment
AT4G34120.1 Cystathionine beta-synthase (CBS) family protein1.2e-2661.82Show/hide
Query:  SFSTSCRSTGLRKST---SIAASGTLMA-------NSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLL
        SFS    S   R ST   SI  S    A       NSVP+ NG YTVGDFMT ++ LHVVKP+T+V++ALE+LVEK++TG PVIDDNW LVGVVSDYDLL
Subjt:  SFSTSCRSTGLRKST---SIAASGTLMA-------NSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLL

Query:  ALDSISGISE
        ALDSISG S+
Subjt:  ALDSISGISE

AT4G36910.1 Cystathionine beta-synthase (CBS) family protein4.8e-3158.33Show/hide
Query:  LSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVE
        LS    RA+S      L  P      P    + +RSF +  R      S S AA  TLM NS    +GVYTVG+FMT+KE+LHVVKPTTTV+EALE+LVE
Subjt:  LSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVE

Query:  KRITGFPVIDDNWKLVGVVSDYDLLALDSISG
         RITGFPVID++WKLVG+VSDYDLLALDSISG
Subjt:  KRITGFPVIDDNWKLVGVVSDYDLLALDSISG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCGATTGGCTGTAGTTTGAGTTCTTTATCGCTTGCGCAATTCAGGGCAAATAGTTTTTCGGTTCAGGAGCTGCTGTTTGGGCCTTGCCGGAGACCTTCATCGCC
GATAGTTCATGCATCTGTGGCTCGGAGCTTTTCTACGTCTTGTCGATCTACGGGGCTCCGGAAATCTACTTCAATCGCCGCTAGTGGCACCTTGATGGCCAATTCTGTAC
CGTCAAGTAATGGTGTGTACACTGTTGGTGACTTTATGACTAGGAAAGAGGAGTTACATGTTGTAAAGCCCACAACCACTGTCGAAGAAGCTTTAGAAATTCTGGTGGAG
AAAAGGATCACAGGATTTCCAGTAATTGATGACAATTGGAAACTGGTTGGCGTCGTATCGGACTATGACTTGTTAGCACTAGACTCCATCTCAGGTATATCAGAACTTTC
TTGTTATTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATCTTCTTCCACAGTTCAAAAACTGCAGGCAAGAAAATAAAATCCGCGAACTTCGGCGACTGTGGAGGGTTTGCTTTTTGTTGATTCGTTTCGGGACTGGTTTCGTGAAG
GCTCTCTCATGGAGTCGATTGGCTGTAGTTTGAGTTCTTTATCGCTTGCGCAATTCAGGGCAAATAGTTTTTCGGTTCAGGAGCTGCTGTTTGGGCCTTGCCGGAGACCT
TCATCGCCGATAGTTCATGCATCTGTGGCTCGGAGCTTTTCTACGTCTTGTCGATCTACGGGGCTCCGGAAATCTACTTCAATCGCCGCTAGTGGCACCTTGATGGCCAA
TTCTGTACCGTCAAGTAATGGTGTGTACACTGTTGGTGACTTTATGACTAGGAAAGAGGAGTTACATGTTGTAAAGCCCACAACCACTGTCGAAGAAGCTTTAGAAATTC
TGGTGGAGAAAAGGATCACAGGATTTCCAGTAATTGATGACAATTGGAAACTGGTTGGCGTCGTATCGGACTATGACTTGTTAGCACTAGACTCCATCTCAGGTATATCA
GAACTTTCTTGTTATTGCTGATACAACTACCATTGTTTATCCCGTTTGAGAAAGATTGTTCGGTTGTCTCATCTTTGGGTGTTTGGCTATTTGTTCCATCTCTTGCTATG
ATATGTTTTCAGGCGAATTACAGACAGCATTAATGAAGAGAGAATCTAGCTTCTTGGATGTATTAATTTTTTTCCCAAATTTTTCTTTATGTTGAAAGATGCATCAGATC
ATTTGTTACTCATGAATTATGTGGTGGAACGACGGATGGAAGCATGTTTCCTGAAGTTGACAGCACGTGGAAAACATTTAATGAGGTACAAAGTCTTCTAAGTAAAACCA
ACGGAAAGGTGGTCGGCGATTTGATGACACCGGTGCCTCTTGTCGTTAGAGAAAATAGTGATCTTGAGGACGCTGCTAGATTATTGCTTCAGACAAAGTATCGCCGCCTT
CCAGTGGTAGATGCGGATGGAAAGCTGGTTGGGATTATCACAAGAGGCAATGTGGTAAGAGCT
Protein sequenceShow/hide protein sequence
MESIGCSLSSLSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVE
KRITGFPVIDDNWKLVGVVSDYDLLALDSISGISELSCYC