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Carg11617 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11617
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionred chlorophyll catabolite reductase
Genome locationCarg_Chr02:2770425..2772471
RNA-Seq ExpressionCarg11617
SyntenyCarg11617
Gene Ontology termsGO:0051743 - red chlorophyll catabolite reductase activity (molecular function)
InterPro domainsIPR009439 - Red chlorophyll catabolite reductase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605235.1 Red chlorophyll catabolite reductase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.0e-0584.38Show/hide
Query:  MERGNIEKRDELVRKKTIATDLGSSLPRLYGR
        MERGNIEKRDELV+KKTI  DLGSSLPRL+G+
Subjt:  MERGNIEKRDELVRKKTIATDLGSSLPRLYGR
KAG7035200.1 hypothetical protein SDJN02_01995, partial [Cucurbita argyrosperma subsp. argyrosperma]9.8e-32100Show/hide
Query:  MERGNIEKRDELVRKKTIATDLGSSLPRLYGRRRKKSDGIWACPEVFLQMSAARAGSLVATPAHSPPTFQTT
        MERGNIEKRDELVRKKTIATDLGSSLPRLYGRRRKKSDGIWACPEVFLQMSAARAGSLVATPAHSPPTFQTT
Subjt:  MERGNIEKRDELVRKKTIATDLGSSLPRLYGRRRKKSDGIWACPEVFLQMSAARAGSLVATPAHSPPTFQTT
XP_022948072.1 red chlorophyll catabolite reductase [Cucurbita moschata]6.0e-0584.38Show/hide
Query:  MERGNIEKRDELVRKKTIATDLGSSLPRLYGR
        MERGNIEKRDELV+KKTI  DLGSSLPRL+G+
Subjt:  MERGNIEKRDELVRKKTIATDLGSSLPRLYGR
XP_023007060.1 red chlorophyll catabolite reductase-like [Cucurbita maxima]1.0e-0484.38Show/hide
Query:  MERGNIEKRDELVRKKTIATDLGSSLPRLYGR
        MERGNIEKRDELV KKTI  DLGSSLPRL+G+
Subjt:  MERGNIEKRDELVRKKTIATDLGSSLPRLYGR
XP_023521266.1 red chlorophyll catabolite reductase-like [Cucurbita pepo subsp. pepo]6.0e-0584.38Show/hide
Query:  MERGNIEKRDELVRKKTIATDLGSSLPRLYGR
        MERGNIEKRDELV+KKTI  DLGSSLPRL+G+
Subjt:  MERGNIEKRDELVRKKTIATDLGSSLPRLYGR
TrEMBL top hitse value%identityAlignment
A0A6J1D7Z2 red chlorophyll catabolite reductase-like9.3e-0475Show/hide
Query:  MERGNIEKRDELVRKKTIATDLGSSLPRLYGR
        +ERG IE+RDELV+KKTI  DLGSSLPRL+G+
Subjt:  MERGNIEKRDELVRKKTIATDLGSSLPRLYGR
A0A6J1G868 red chlorophyll catabolite reductase2.9e-0584.38Show/hide
Query:  MERGNIEKRDELVRKKTIATDLGSSLPRLYGR
        MERGNIEKRDELV+KKTI  DLGSSLPRL+G+
Subjt:  MERGNIEKRDELVRKKTIATDLGSSLPRLYGR
A0A6J1L1Y1 red chlorophyll catabolite reductase-like4.9e-0584.38Show/hide
Query:  MERGNIEKRDELVRKKTIATDLGSSLPRLYGR
        MERGNIEKRDELV KKTI  DLGSSLPRL+G+
Subjt:  MERGNIEKRDELVRKKTIATDLGSSLPRLYGR
A0A6J1L605 LOW QUALITY PROTEIN: red chlorophyll catabolite reductase, chloroplastic-like4.9e-0584.38Show/hide
Query:  MERGNIEKRDELVRKKTIATDLGSSLPRLYGR
        MERGNIEKRDELV KKTI  DLGSSLPRL+G+
Subjt:  MERGNIEKRDELVRKKTIATDLGSSLPRLYGR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAGGTAATATTGAGAAAAGGGATGAGTTGGTTAGGAAGAAAACCATTGCTACAGACTTGGGTTCTAGTTTGCCAAGATTGTATGGTCGTAGGCGTAAGAAGAG
CGATGGAATTTGGGCGTGTCCAGAAGTCTTCTTACAAATGAGTGCAGCACGCGCAGGGTCTTTGGTCGCTACTCCAGCTCACTCTCCACCCACCTTCCAAACAACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGAGGTAATATTGAGAAAAGGGATGAGTTGGTTAGGAAGAAAACCATTGCTACAGACTTGGGTTCTAGTTTGCCAAGATTGTATGGTCGTAGGCGTAAGAAGAG
CGATGGAATTTGGGCGTGTCCAGAAGTCTTCTTACAAATGAGTGCAGCACGCGCAGGGTCTTTGGTCGCTACTCCAGCTCACTCTCCACCCACCTTCCAAACAACCTAA
Protein sequenceShow/hide protein sequence
MERGNIEKRDELVRKKTIATDLGSSLPRLYGRRRKKSDGIWACPEVFLQMSAARAGSLVATPAHSPPTFQTT