; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg11623 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11623
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHTH-type transcriptional regulator protein ptxE
Genome locationCarg_Chr02:2832754..2833215
RNA-Seq ExpressionCarg11623
SyntenyCarg11623
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605242.1 hypothetical protein SDJN03_02559, partial [Cucurbita argyrosperma subsp. sororia]1.6e-79100Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGGSEKCGSRRPVVFCEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
        MKAGGGGSEKCGSRRPVVFCEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
Subjt:  MKAGGGGSEKCGSRRPVVFCEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE

XP_022947655.1 uncharacterized protein LOC111451454 [Cucurbita moschata]4.7e-7697.39Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPA+FICNSDDMDFNDVVTAVDDDDELQLG LYFALPLEKLNKPLHAEDMAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGGSEKCGSRRPVVFCEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
        MKAGGGGSEKCGSRR VVF EEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
Subjt:  MKAGGGGSEKCGSRRPVVFCEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE

XP_023007426.1 uncharacterized protein LOC111499928 [Cucurbita maxima]2.2e-7394.12Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVL KDPA+FICNSDDMDFNDVV AVDD+DELQLG LYFALPLEKLNKPLHAEDMAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGGSEKCGSRRPVVFCEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
        MKAGGGGSEKCGSRRPVVF EEELRKGPR+GVKKGT +GGSRKFTAKLCAIPE
Subjt:  MKAGGGGSEKCGSRRPVVFCEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE

XP_023533314.1 uncharacterized protein LOC111795245 isoform X1 [Cucurbita pepo subsp. pepo]3.3e-7798.04Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPA+FICNSDDMDFNDVVTAVDDDDELQLG LYFALPLEKLNKPLHAEDMAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGGSEKCGSRRPVVFCEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
        MKAGGGGSEKCGSRRPVVFCEEELRKGPRKGVKKGT SGGSRKFTAKLCAIPE
Subjt:  MKAGGGGSEKCGSRRPVVFCEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE

XP_038902080.1 uncharacterized protein LOC120088720 [Benincasa hispida]5.2e-5978.34Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MGIC+SSD+ NV+TAKLIL+DGTL+E+SYPVKVSY+L K PA+FICNSD+MDF+DVV AVDDDDELQLG LYFALPL++LN+PL AE+MAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGGSEKCGSRR----PVVFCEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
        MKAGGGG+EKCGSRR    PV F +EE RKGPRKG+KK  GSG SRKFTAKL AIPE
Subjt:  MKAGGGGSEKCGSRR----PVVFCEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE

TrEMBL top hitse value%identityAlignment
A0A6J1D8L2 uncharacterized protein LOC1110179242.7e-5375.16Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MGICISSDS NV+TAKLIL+DGTLLEYSYPVKVSYVL KDPA+FICNSD+MDF+DVV+A+DD DELQLG LYFALPL++LN+PLHAE+MAALAVKAS+AL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGGSEKCGSRR----PVVFCEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
        MKAGG   EKCGSRR    P +F +EE  K  R   KK  GSG  RKFTAKL AIPE
Subjt:  MKAGGGGSEKCGSRR----PVVFCEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE

A0A6J1EJ90 uncharacterized protein LOC1114349661.1e-5473.89Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MGICISSDS NV+TAKLIL+DGTLLE+SYPVKVS++LHK PATFICNSDDMDF+D V AV DDD LQLGHLYFALPL++LN+PLH E+MAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGGSEKCGSRR----PVVFCEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
        +KAG GG+EK GSRR    P+ F +EE RK P + ++K  GSGG RKF AKL AIPE
Subjt:  MKAGGGGSEKCGSRR----PVVFCEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE

A0A6J1G7I2 uncharacterized protein LOC1114514542.3e-7697.39Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPA+FICNSDDMDFNDVVTAVDDDDELQLG LYFALPLEKLNKPLHAEDMAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGGSEKCGSRRPVVFCEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
        MKAGGGGSEKCGSRR VVF EEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
Subjt:  MKAGGGGSEKCGSRRPVVFCEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE

A0A6J1I7K7 uncharacterized protein LOC1114703503.4e-5675.16Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MGICISSDS NV+TAKLIL+DGTLLE+SYPVKVS++LHK PATFICNSDDMDF+D V AV DDD LQLGHLYFALPL++LN+PLH E+MAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGGSEKCGSRR----PVVFCEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
        +KAG GG+EK GSRR    PV F +EE RK PR+G++KG+G G  RKF AKL AIPE
Subjt:  MKAGGGGSEKCGSRR----PVVFCEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE

A0A6J1L0H7 uncharacterized protein LOC1114999281.1e-7394.12Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVL KDPA+FICNSDDMDFNDVV AVDD+DELQLG LYFALPLEKLNKPLHAEDMAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGGSEKCGSRRPVVFCEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
        MKAGGGGSEKCGSRRPVVF EEELRKGPR+GVKKGT +GGSRKFTAKLCAIPE
Subjt:  MKAGGGGSEKCGSRRPVVFCEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76600.1 unknown protein5.8e-1638.81Show/hide
Query:  MGICISSDS----PNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPAT----------FICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHA
        MG+C+S +      + +TAK++  +G L EY  PV  S VL  +  +          F+CNSD + ++D + A++ D+ LQ   +YF LP+ K    L A
Subjt:  MGICISSDS----PNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPAT----------FICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHA

Query:  EDMAALAVKASSALMKAGGGGSEKCGSRR--PVV
         DMAALAVKAS A+ KA G  + +  S R  PVV
Subjt:  EDMAALAVKASSALMKAGGGGSEKCGSRR--PVV

AT2G23690.1 unknown protein3.8e-3954.6Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MGIC S +S  V+TAKLIL DG ++E++ PVKV YVL K+P  FICNSDDMDF++VV+A+  D+E QLG LYFALPL  L+  L AE+MAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGG-GSEKCGSRR----PVVFCEEEL-----RKGPRKGVKKGTGSGGSRKFTAKLCAIPE
        M++GG  G +KC  RR    PV+F    +         R G ++G G  G RK+ AKL  I E
Subjt:  MKAGGG-GSEKCGSRR----PVVFCEEEL-----RKGPRKGVKKGTGSGGSRKFTAKLCAIPE

AT3G50800.1 unknown protein3.1e-3353.12Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MG C S +S    TAKLIL DGTL E+S PVKV  +L K+P +F+CNSDDMDF+D V AV   ++L+ G LYF LPL  LN PL A++MAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGG----SEKCGSRRPVVFCEEELRKGPRKGV-KKGTGSGGS--RKFTAKLCAIPE
         K+GGGG     E  G  R        +R+  R G   +G G GG   RKFTA+L +I E
Subjt:  MKAGGGG----SEKCGSRRPVVFCEEELRKGPRKGV-KKGTGSGGS--RKFTAKLCAIPE

AT4G37240.1 unknown protein1.5e-3552.44Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MGIC SS+S  V+TAKLIL DG ++E++ PVKV YVL K P  FICNSDDMDF+D V A+  D+ELQLG +YFALPL  L +PL AE+MAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGG-SEKCGSRRPVVFCEEELRKGP----------RKGVKKGTGSGGSRKFTAKLCAIPE
        M+ GGGG   KC    P+V  +  +R G           R+ V+ G G G       + C   E
Subjt:  MKAGGGG-SEKCGSRRPVVFCEEELRKGP----------RKGVKKGTGSGGSRKFTAKLCAIPE

AT5G66580.1 unknown protein2.6e-3251.9Show/hide
Query:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL
        MG C S +S    +AKLIL DGTL E+S PVKV  +L K+P +F+CNSD+MDF+D V+AV  ++EL+ G LYF LPL  LN PL AE+MAALAVKASSAL
Subjt:  MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSAL

Query:  MKAGGGGSEKCGSRRPVVFCEEELRKGPRKGVKKGTGSG-----GSRKFTAKLCAIPE
         K+GG G         V   E+  +K    GVK   G G     G R+FTA L  I E
Subjt:  MKAGGGGSEKCGSRRPVVFCEEELRKGPRKGVKKGTGSG-----GSRKFTAKLCAIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATTTGCATTTCCTCCGATTCCCCCAATGTTTCTACGGCCAAACTCATTCTTTCAGACGGAACATTGCTGGAATATTCCTACCCGGTAAAGGTTTCGTATGTACT
ACATAAAGATCCGGCGACTTTCATTTGCAACTCCGACGATATGGATTTCAACGATGTTGTAACCGCCGTTGACGACGACGACGAGCTTCAACTCGGGCACCTTTACTTTG
CGCTTCCGTTGGAGAAGCTGAACAAGCCGCTTCACGCGGAGGATATGGCTGCATTGGCTGTTAAGGCTAGCTCGGCGCTGATGAAGGCGGGCGGTGGAGGGAGTGAGAAA
TGTGGGTCACGGCGGCCGGTGGTGTTTTGTGAGGAGGAGCTTAGGAAGGGTCCGAGAAAGGGTGTGAAGAAGGGGACAGGGAGTGGTGGAAGTAGGAAATTCACGGCGAA
ATTGTGTGCAATTCCCGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTATTTGCATTTCCTCCGATTCCCCCAATGTTTCTACGGCCAAACTCATTCTTTCAGACGGAACATTGCTGGAATATTCCTACCCGGTAAAGGTTTCGTATGTACT
ACATAAAGATCCGGCGACTTTCATTTGCAACTCCGACGATATGGATTTCAACGATGTTGTAACCGCCGTTGACGACGACGACGAGCTTCAACTCGGGCACCTTTACTTTG
CGCTTCCGTTGGAGAAGCTGAACAAGCCGCTTCACGCGGAGGATATGGCTGCATTGGCTGTTAAGGCTAGCTCGGCGCTGATGAAGGCGGGCGGTGGAGGGAGTGAGAAA
TGTGGGTCACGGCGGCCGGTGGTGTTTTGTGAGGAGGAGCTTAGGAAGGGTCCGAGAAAGGGTGTGAAGAAGGGGACAGGGAGTGGTGGAAGTAGGAAATTCACGGCGAA
ATTGTGTGCAATTCCCGAATGA
Protein sequenceShow/hide protein sequence
MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAVDDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEK
CGSRRPVVFCEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE