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Carg11626 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11626
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein DA1-related 1-like isoform X1
Genome locationCarg_Chr02:2851709..2856933
RNA-Seq ExpressionCarg11626
SyntenyCarg11626
Gene Ontology termsGO:0043130 - ubiquitin binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001781 - Zinc finger, LIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605244.1 Protein DA1-related 1, partial [Cucurbita argyrosperma subsp. sororia]1.1e-5299Show/hide
Query:  MEEDKRSAKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK
        MEED+RSAKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK
Subjt:  MEEDKRSAKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK

KAG7035208.1 Protein DA1-related 1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-53100Show/hide
Query:  MEEDKRSAKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK
        MEEDKRSAKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK
Subjt:  MEEDKRSAKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK

XP_022948106.1 protein DA1-related 1-like isoform X1 [Cucurbita moschata]1.1e-5299Show/hide
Query:  MEEDKRSAKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK
        MEED+RSAKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK
Subjt:  MEEDKRSAKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK

XP_022948110.1 protein DA1-related 1-like isoform X2 [Cucurbita moschata]1.2e-5197Show/hide
Query:  MEEDKRSAKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK
        +EED+R AKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK
Subjt:  MEEDKRSAKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK

XP_023532055.1 protein DA1-related 1-like isoform X1 [Cucurbita pepo subsp. pepo]4.2e-4994Show/hide
Query:  MEEDKRSAKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK
        +EED+R AKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYI NPNPVFYPSGYRVCAGCHTEIGYGRF SSMEAFWHPEC RCNYCNEPITDYK
Subjt:  MEEDKRSAKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK

TrEMBL top hitse value%identityAlignment
A0A6J1D8G2 protein DA1-related 18.9e-3769.57Show/hide
Query:  MEEDKRSAKAQHEE-----------DEMILKFQAEEDEQLARAFQESLNIDPPPPRY----IFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPE
        MEED+R+AKAQ EE           DE + KFQAEEDEQLARA QESLNI+PPPPRY    IFNP P+FYPSGYR+CAGC+ EIG+GRFLS M A WHPE
Subjt:  MEEDKRSAKAQHEE-----------DEMILKFQAEEDEQLARAFQESLNIDPPPPRY----IFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPE

Query:  CFRCNYCNEPITDYK
        CFRC+ CNEPITDY+
Subjt:  CFRCNYCNEPITDYK

A0A6J1G8G2 protein DA1-related 1-like isoform X15.2e-5399Show/hide
Query:  MEEDKRSAKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK
        MEED+RSAKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK
Subjt:  MEEDKRSAKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK

A0A6J1G8T5 protein DA1-related 1-like isoform X25.7e-5297Show/hide
Query:  MEEDKRSAKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK
        +EED+R AKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK
Subjt:  MEEDKRSAKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK

A0A6J1L4K1 protein DA1-related 1-like isoform X23.6e-4690Show/hide
Query:  MEEDKRSAKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK
        +EED+R AKAQHEEDE ILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYR CAGCHTEIGYG FLSSM AFWHPECFRCN  NEPITDY+
Subjt:  MEEDKRSAKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK

A0A6J1L7B2 protein DA1-related 1-like isoform X13.2e-4792Show/hide
Query:  MEEDKRSAKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK
        MEED+RSAKAQHEEDE ILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYR CAGCHTEIGYG FLSSM AFWHPECFRCN  NEPITDY+
Subjt:  MEEDKRSAKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK

SwissProt top hitse value%identityAlignment
P0C7Q8 Protein DA13.2e-1535.45Show/hide
Query:  EEDEQLARAFQESLNIDPPPPRY---------------------------------IFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCN
        +EDEQLARA QES+ +   P                                    I+ P P+ +   +R+CAGC+ EIG+GRFL+ + + WHPECFRC 
Subjt:  EEDEQLARAFQESLNIDPPPPRY---------------------------------IFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCN

Query:  YCNEPITDYK
         C++PI++Y+
Subjt:  YCNEPITDYK

Q8W4F0 Protein DA1-related 16.3e-2450.43Show/hide
Query:  EEDKRSAKAQHEEDEMIL-------------KFQAEEDEQLARAFQESLNIDPPP---PRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPE
        EE+KR A+AQ EE E +L             K Q EEDE LA+A QES+N+  PP   P  I  P P   PS +R+C GC  EIG+GRFLS M   WHPE
Subjt:  EEDKRSAKAQHEEDEMIL-------------KFQAEEDEQLARAFQESLNIDPPP---PRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPE

Query:  CFRCNYCNEPITDYK
        CF CN C++PI DY+
Subjt:  CFRCNYCNEPITDYK

Q9FJX8 Protein DA1-related 66.6e-0528.42Show/hide
Query:  EEDEMILKFQAEEDEQLARAFQESL-----------NIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPI
        E + +  +   +EDEQLA+A +ESL            ++        NP P        +C GC+  + +G  ++ +   WHP CF C  C++PI
Subjt:  EEDEMILKFQAEEDEQLARAFQESL-----------NIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPI

Q9FJX9 Protein DA1-related 74.6e-0633.33Show/hide
Query:  MEEDKR-SAKAQHEEDEMILK--FQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPI
        +EEDK  S      ED  + K  +++ + +     F++ +  D   PR   N N   +P  + +C GC + I YGR + ++   WHPECF C YC++PI
Subjt:  MEEDKR-SAKAQHEEDEMILK--FQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPI

Arabidopsis top hitse value%identityAlignment
AT1G19270.1 DA12.2e-1635.45Show/hide
Query:  EEDEQLARAFQESLNIDPPPPRY---------------------------------IFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCN
        +EDEQLARA QES+ +   P                                    I+ P P+ +   +R+CAGC+ EIG+GRFL+ + + WHPECFRC 
Subjt:  EEDEQLARAFQESLNIDPPPPRY---------------------------------IFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCN

Query:  YCNEPITDYK
         C++PI++Y+
Subjt:  YCNEPITDYK

AT4G36860.1 LIM domain-containing protein4.5e-2550.43Show/hide
Query:  EEDKRSAKAQHEEDEMIL-------------KFQAEEDEQLARAFQESLNIDPPP---PRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPE
        EE+KR A+AQ EE E +L             K Q EEDE LA+A QES+N+  PP   P  I  P P   PS +R+C GC  EIG+GRFLS M   WHPE
Subjt:  EEDKRSAKAQHEEDEMIL-------------KFQAEEDEQLARAFQESLNIDPPP---PRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPE

Query:  CFRCNYCNEPITDYK
        CF CN C++PI DY+
Subjt:  CFRCNYCNEPITDYK

AT5G66610.1 DA1-related protein 73.2e-0733.33Show/hide
Query:  MEEDKR-SAKAQHEEDEMILK--FQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPI
        +EEDK  S      ED  + K  +++ + +     F++ +  D   PR   N N   +P  + +C GC + I YGR + ++   WHPECF C YC++PI
Subjt:  MEEDKR-SAKAQHEEDEMILK--FQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPI

AT5G66610.2 DA1-related protein 73.2e-0733.33Show/hide
Query:  MEEDKR-SAKAQHEEDEMILK--FQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPI
        +EEDK  S      ED  + K  +++ + +     F++ +  D   PR   N N   +P  + +C GC + I YGR + ++   WHPECF C YC++PI
Subjt:  MEEDKR-SAKAQHEEDEMILK--FQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPI

AT5G66620.1 DA1-related protein 64.7e-0628.42Show/hide
Query:  EEDEMILKFQAEEDEQLARAFQESL-----------NIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPI
        E + +  +   +EDEQLA+A +ESL            ++        NP P        +C GC+  + +G  ++ +   WHP CF C  C++PI
Subjt:  EEDEMILKFQAEEDEQLARAFQESL-----------NIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGACAAGCGATCTGCCAAAGCTCAACACGAGGAAGATGAGATGATTTTGAAATTTCAAGCTGAAGAAGATGAACAGTTAGCTAGAGCTTTCCAAGAAAGTCT
AAACATAGATCCACCACCTCCTAGATATATTTTCAATCCTAATCCTGTCTTCTATCCATCTGGATACAGGGTTTGTGCCGGGTGCCACACTGAGATTGGTTATGGGCGGT
TTCTAAGTAGCATGGAAGCTTTTTGGCATCCAGAATGTTTTCGCTGCAATTATTGCAATGAACCCATTACAGACTATAAG
mRNA sequenceShow/hide mRNA sequence
TTTGGTCGTTTTGTTATCAACTCCTGGTGACGTTTTGTGAAACCAGAAAATTTAAAAATGCAAATGGGACCAATGACGTTTTGTGGGTTGTCGTGGAAATTTTGCAAGAG
TACCTACTTTCGGAGGAGGATCGAGAGAAATTTGATGAACTCTACAGAATCTTCTCTCTTCTGGGAAAAAGTATAGCAGCCAAACAATCCAATCGTATTAAAGTATGGGT
TGGTGGACTAAATTCTTCAAAGGCCATGAAAGCCAATACAAGGAAACATATGGAAATGATAGAATTTGGGATCAACCTCAAACCTCTGTGGTAGGAAACATGTTTTACTT
CTCTTCTTATTTTTATGTGGCTGTTTCTGCTGATCTGTCATAGATCGATGCCGATCTGTGTTTGTCGAAAACTTGACTGCAGGGTGAATTAGCGGAGTTCGAACAAGAGG
ACATTGATTTTGCAACTGCACTATCACTTTCGGAAGAAGATCAAAAAGTGGAAGCAGTGATAGTACCAAAGATGAATCAGAGGATGATGAACAAGGTAGCATAGCCCAGG
CAGAGGATGACAATCAAATTACTAAGTCTCAATTGGAGGAAGATGAGAGACTTGCCAAAGCTCGAATGGAGGAAGACAAGCGATCTGCCAAAGCTCAACACGAGGAAGAT
GAGATGATTTTGAAATTTCAAGCTGAAGAAGATGAACAGTTAGCTAGAGCTTTCCAAGAAAGTCTAAACATAGATCCACCACCTCCTAGATATATTTTCAATCCTAATCC
TGTCTTCTATCCATCTGGATACAGGGTTTGTGCCGGGTGCCACACTGAGATTGGTTATGGGCGGTTTCTAAGTAGCATGGAAGCTTTTTGGCATCCAGAATGTTTTCGCT
GCAATTATTGCAATGAACCCATTACAGACTATAAG
Protein sequenceShow/hide protein sequence
MEEDKRSAKAQHEEDEMILKFQAEEDEQLARAFQESLNIDPPPPRYIFNPNPVFYPSGYRVCAGCHTEIGYGRFLSSMEAFWHPECFRCNYCNEPITDYK