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Carg11637 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11637
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionBranched-chain amino acid aminotransferase
Genome locationCarg_Chr02:2970097..2970870
RNA-Seq ExpressionCarg11637
SyntenyCarg11637
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605256.1 hypothetical protein SDJN03_02573, partial [Cucurbita argyrosperma subsp. sororia]1.8e-3998.72Show/hide
Query:  MCYLVECKTCNKTSWKGCGNHLPDLYNRIEKGKHCTCRPWPGVVVVPLQDSADMKTAPPSMANSKSSVPKGKTIDKKA
        MCYLVECKTCNKTSWKGCGNHLPDLYNRIEKGKHCTCRPWPGVVVVPLQDSADMKTAPPSMANSKSSVP+GKTIDKKA
Subjt:  MCYLVECKTCNKTSWKGCGNHLPDLYNRIEKGKHCTCRPWPGVVVVPLQDSADMKTAPPSMANSKSSVPKGKTIDKKA

KAG7035219.1 hypothetical protein SDJN02_02014 [Cucurbita argyrosperma subsp. argyrosperma]6.2e-40100Show/hide
Query:  MCYLVECKTCNKTSWKGCGNHLPDLYNRIEKGKHCTCRPWPGVVVVPLQDSADMKTAPPSMANSKSSVPKGKTIDKKA
        MCYLVECKTCNKTSWKGCGNHLPDLYNRIEKGKHCTCRPWPGVVVVPLQDSADMKTAPPSMANSKSSVPKGKTIDKKA
Subjt:  MCYLVECKTCNKTSWKGCGNHLPDLYNRIEKGKHCTCRPWPGVVVVPLQDSADMKTAPPSMANSKSSVPKGKTIDKKA

KGN62035.1 hypothetical protein Csa_006238 [Cucumis sativus]3.7e-1659.46Show/hide
Query:  MCYLVECKTCNKTSWKGCGNHLPDLYNRIEKGKHCTCRPWPGVVVVPLQDSADMKTAPPSMANSKSSVPKGKTI
        MC LV CK C+K +WKGCG HLP LY  +EKGKHC C PWPGVVV P +D  D  T  PS     SSV  GKT+
Subjt:  MCYLVECKTCNKTSWKGCGNHLPDLYNRIEKGKHCTCRPWPGVVVVPLQDSADMKTAPPSMANSKSSVPKGKTI

RQO92453.1 hypothetical protein POPTR_007G034000 [Populus trichocarpa]1.5e-1457.81Show/hide
Query:  MCYLVECKTCNKTSWKGCGNHLPDLYNRIEKGKHCTCRPWPGVVVVPLQDSADMKTAPPSMANS
        MCY V CK CNK SW GCGNHL  +Y  IEKGKHCTC+PWPGVV++  + +A+ +      ANS
Subjt:  MCYLVECKTCNKTSWKGCGNHLPDLYNRIEKGKHCTCRPWPGVVVVPLQDSADMKTAPPSMANS

XP_006380739.1 uncharacterized protein LOC7473128 isoform X2 [Populus trichocarpa]1.5e-1457.81Show/hide
Query:  MCYLVECKTCNKTSWKGCGNHLPDLYNRIEKGKHCTCRPWPGVVVVPLQDSADMKTAPPSMANS
        MCY V CK CNK SW GCGNHL  +Y  IEKGKHCTC+PWPGVV++  + +A+ +      ANS
Subjt:  MCYLVECKTCNKTSWKGCGNHLPDLYNRIEKGKHCTCRPWPGVVVVPLQDSADMKTAPPSMANS

TrEMBL top hitse value%identityAlignment
A0A0A0LJK5 Uncharacterized protein1.8e-1659.46Show/hide
Query:  MCYLVECKTCNKTSWKGCGNHLPDLYNRIEKGKHCTCRPWPGVVVVPLQDSADMKTAPPSMANSKSSVPKGKTI
        MC LV CK C+K +WKGCG HLP LY  +EKGKHC C PWPGVVV P +D  D  T  PS     SSV  GKT+
Subjt:  MCYLVECKTCNKTSWKGCGNHLPDLYNRIEKGKHCTCRPWPGVVVVPLQDSADMKTAPPSMANSKSSVPKGKTI

A0A2P5FXW5 Uncharacterized protein1.7e-1470.59Show/hide
Query:  MCYLVECKTCNKTSWKGCGNHLPDLYNRIEKGKHCTCRPWPGVVVVPLQDS
        MCY VEC+TC K +W GCG HLP LYN IEKGKHC CR WPG VV+P Q S
Subjt:  MCYLVECKTCNKTSWKGCGNHLPDLYNRIEKGKHCTCRPWPGVVVVPLQDS

A0A3N7F5W7 Uncharacterized protein7.4e-1557.81Show/hide
Query:  MCYLVECKTCNKTSWKGCGNHLPDLYNRIEKGKHCTCRPWPGVVVVPLQDSADMKTAPPSMANS
        MCY V CK CNK SW GCGNHL  +Y  IEKGKHCTC+PWPGVV++  + +A+ +      ANS
Subjt:  MCYLVECKTCNKTSWKGCGNHLPDLYNRIEKGKHCTCRPWPGVVVVPLQDSADMKTAPPSMANS

U5G557 Uncharacterized protein9.7e-1550Show/hide
Query:  MCYLVECKTCNKTSWKGCGNHLPDLYNRIEKGKHCTCRPWPGVVVVPLQDSADMKTAPPSMANSKSSVPKGKTIDKKA
        MCY V CK CNK SW GCGNHL  +Y  IEKGKHCTC+PWPGVV++  + +A+ +   P  A S +S  K   + + +
Subjt:  MCYLVECKTCNKTSWKGCGNHLPDLYNRIEKGKHCTCRPWPGVVVVPLQDSADMKTAPPSMANSKSSVPKGKTIDKKA

U5G8E8 Uncharacterized protein7.4e-1557.81Show/hide
Query:  MCYLVECKTCNKTSWKGCGNHLPDLYNRIEKGKHCTCRPWPGVVVVPLQDSADMKTAPPSMANS
        MCY V CK CNK SW GCGNHL  +Y  IEKGKHCTC+PWPGVV++  + +A+ +      ANS
Subjt:  MCYLVECKTCNKTSWKGCGNHLPDLYNRIEKGKHCTCRPWPGVVVVPLQDSADMKTAPPSMANS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTATCTCGTGGAGTGCAAGACGTGCAACAAGACCTCCTGGAAGGGCTGTGGCAATCACCTGCCTGATCTCTATAACCGAATTGAGAAGGGAAAGCACTGCACTTG
CCGCCCCTGGCCCGGCGTCGTCGTCGTGCCCCTTCAGGATTCTGCTGACATGAAAACCGCACCGCCATCGATGGCTAACTCGAAATCATCTGTCCCTAAAGGTAAGACAA
TTGATAAGAAAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATATTCCCAAAGCTTTTTGTGCTGTTAAATTGCTCAAACCATTGGTGGGTTCACAAATTGCTATCTAAAAAACTCAGCCCTCCCCATATCTTCACAGCCTTGCAACCCTC
TGGACATCATGTGTTATCTCGTGGAGTGCAAGACGTGCAACAAGACCTCCTGGAAGGGCTGTGGCAATCACCTGCCTGATCTCTATAACCGAATTGAGAAGGGAAAGCAC
TGCACTTGCCGCCCCTGGCCCGGCGTCGTCGTCGTGCCCCTTCAGGATTCTGCTGACATGAAAACCGCACCGCCATCGATGGCTAACTCGAAATCATCTGTCCCTAAAGG
TAAGACAATTGATAAGAAAGCTTAGGGAAACGTGGAGTGGCTAAGTTTGAGAGGTTTGAGTCATTTAAGCAATTTCATATGAATTATTGTTATATAAAATAAAG
Protein sequenceShow/hide protein sequence
MCYLVECKTCNKTSWKGCGNHLPDLYNRIEKGKHCTCRPWPGVVVVPLQDSADMKTAPPSMANSKSSVPKGKTIDKKA