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Carg11650 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11650
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr02:3131713..3132051
RNA-Seq ExpressionCarg11650
SyntenyCarg11650
Gene Ontology termsGO:0050793 - regulation of developmental process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651918.1 hypothetical protein Csa_006213 [Cucumis sativus]1.5e-1553.64Show/hide
Query:  FLAIATHQIQGRPFKP----QMPLHSSPSVVGFGQSDTGSKDDFRPTMPGNSPGVGHHSVKKSGSGGG-GGGAQSENNMEGVKDDDSRTA-----GSRHA
        +LA  T+QIQGRPFKP     +P HSS    GF +SD GSKDDFRPT PGNSPGVGHHS+++SG+        ++ +  EG+KDD   TA     G  H 
Subjt:  FLAIATHQIQGRPFKP----QMPLHSSPSVVGFGQSDTGSKDDFRPTMPGNSPGVGHHSVKKSGSGGG-GGGAQSENNMEGVKDDDSRTA-----GSRHA

Query:  IHRIASKPNA
         H IASKPNA
Subjt:  IHRIASKPNA

KAG6571310.1 Precursor of CEP6, partial [Cucurbita argyrosperma subsp. sororia]3.8e-1450Show/hide
Query:  THFPILLLAIFLAIATHQIQGRPFKPQMPLHSSPSVVGFGQSDTGSKDDFRPTMPGNSPGVGHHSVKKSGSGGGGGGAQSENNMEGVKDD-----DSRTA
        TH  +LLL IF+AI THQIQGRP KP       P+ V F +SD G KDDF P   GNSPGVGHHSV++ G    G   +S +  EG+K+D        + 
Subjt:  THFPILLLAIFLAIATHQIQGRPFKPQMPLHSSPSVVGFGQSDTGSKDDFRPTMPGNSPGVGHHSVKKSGSGGGGGGAQSENNMEGVKDD-----DSRTA

Query:  GSRHAIHRIASKPN
        G  HA  R ASKPN
Subjt:  GSRHAIHRIASKPN

KAG6605273.1 hypothetical protein SDJN03_02590, partial [Cucurbita argyrosperma subsp. sororia]4.9e-54100Show/hide
Query:  MATHFPILLLAIFLAIATHQIQGRPFKPQMPLHSSPSVVGFGQSDTGSKDDFRPTMPGNSPGVGHHSVKKSGSGGGGGGAQSENNMEGVKDDDSRTAGSR
        MATHFPILLLAIFLAIATHQIQGRPFKPQMPLHSSPSVVGFGQSDTGSKDDFRPTMPGNSPGVGHHSVKKSGSGGGGGGAQSENNMEGVKDDDSRTAGSR
Subjt:  MATHFPILLLAIFLAIATHQIQGRPFKPQMPLHSSPSVVGFGQSDTGSKDDFRPTMPGNSPGVGHHSVKKSGSGGGGGGAQSENNMEGVKDDDSRTAGSR

Query:  HAIHRIASKPNA
        HAIHRIASKPNA
Subjt:  HAIHRIASKPNA

XP_008457955.1 PREDICTED: uncharacterized protein LOC103497520 [Cucumis melo]9.6e-1856.03Show/hide
Query:  ILLLAIFLAIATHQIQGRPFKP----QMPLHSSPSVVGFGQSDTGSKDDFRPTMPGNSPGVGHHSVKKSGSGGG-GGGAQSENNMEGVKDDDSRTA----
        ILLL IF+A  T+QIQGRP KP     +P HSS    GF +S+ GSKDDFRPT PGNSPGVGHHSV++SG+        Q  +N EG+KDD   TA    
Subjt:  ILLLAIFLAIATHQIQGRPFKP----QMPLHSSPSVVGFGQSDTGSKDDFRPTMPGNSPGVGHHSVKKSGSGGG-GGGAQSENNMEGVKDDDSRTA----

Query:  -GSRHAIHRIASKPNA
         G  H +H IASKPNA
Subjt:  -GSRHAIHRIASKPNA

XP_011650158.1 precursor of CEP9 [Cucumis sativus]1.2e-1755.17Show/hide
Query:  ILLLAIFLAIATHQIQGRPFKP----QMPLHSSPSVVGFGQSDTGSKDDFRPTMPGNSPGVGHHSVKKSGSGGG-GGGAQSENNMEGVKDDDSRTA----
        ILLL IF+A  T+QIQGRPFKP     +P HSS    GF +SD GSKDDFRPT PGNSPGVGHHS+++SG+        ++ +  EG+KDD   TA    
Subjt:  ILLLAIFLAIATHQIQGRPFKP----QMPLHSSPSVVGFGQSDTGSKDDFRPTMPGNSPGVGHHSVKKSGSGGG-GGGAQSENNMEGVKDDDSRTA----

Query:  -GSRHAIHRIASKPNA
         G  H  H IASKPNA
Subjt:  -GSRHAIHRIASKPNA

TrEMBL top hitse value%identityAlignment
A0A0A0LMN4 Uncharacterized protein6.0e-1855.17Show/hide
Query:  ILLLAIFLAIATHQIQGRPFKP----QMPLHSSPSVVGFGQSDTGSKDDFRPTMPGNSPGVGHHSVKKSGSGGG-GGGAQSENNMEGVKDDDSRTA----
        ILLL IF+A  T+QIQGRPFKP     +P HSS    GF +SD GSKDDFRPT PGNSPGVGHHS+++SG+        ++ +  EG+KDD   TA    
Subjt:  ILLLAIFLAIATHQIQGRPFKP----QMPLHSSPSVVGFGQSDTGSKDDFRPTMPGNSPGVGHHSVKKSGSGGG-GGGAQSENNMEGVKDDDSRTA----

Query:  -GSRHAIHRIASKPNA
         G  H  H IASKPNA
Subjt:  -GSRHAIHRIASKPNA

A0A1S3C7Z6 uncharacterized protein LOC1034975204.6e-1856.03Show/hide
Query:  ILLLAIFLAIATHQIQGRPFKP----QMPLHSSPSVVGFGQSDTGSKDDFRPTMPGNSPGVGHHSVKKSGSGGG-GGGAQSENNMEGVKDDDSRTA----
        ILLL IF+A  T+QIQGRP KP     +P HSS    GF +S+ GSKDDFRPT PGNSPGVGHHSV++SG+        Q  +N EG+KDD   TA    
Subjt:  ILLLAIFLAIATHQIQGRPFKP----QMPLHSSPSVVGFGQSDTGSKDDFRPTMPGNSPGVGHHSVKKSGSGGG-GGGAQSENNMEGVKDDDSRTA----

Query:  -GSRHAIHRIASKPNA
         G  H +H IASKPNA
Subjt:  -GSRHAIHRIASKPNA

A0A5A7TR16 Uncharacterized protein4.6e-1856.03Show/hide
Query:  ILLLAIFLAIATHQIQGRPFKP----QMPLHSSPSVVGFGQSDTGSKDDFRPTMPGNSPGVGHHSVKKSGSGGG-GGGAQSENNMEGVKDDDSRTA----
        ILLL IF+A  T+QIQGRP KP     +P HSS    GF +S+ GSKDDFRPT PGNSPGVGHHSV++SG+        Q  +N EG+KDD   TA    
Subjt:  ILLLAIFLAIATHQIQGRPFKP----QMPLHSSPSVVGFGQSDTGSKDDFRPTMPGNSPGVGHHSVKKSGSGGG-GGGAQSENNMEGVKDDDSRTA----

Query:  -GSRHAIHRIASKPNA
         G  H +H IASKPNA
Subjt:  -GSRHAIHRIASKPNA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACCCATTTCCCTATCCTTCTACTCGCCATCTTCCTAGCCATTGCAACTCACCAAATCCAGGGAAGGCCTTTCAAACCTCAAATGCCTCTCCACTCCTCTCCGAG
CGTCGTCGGTTTTGGCCAGTCTGATACCGGTAGCAAAGACGATTTTCGCCCGACAATGCCTGGAAACAGCCCTGGAGTTGGCCATCATTCAGTCAAGAAAAGCGGCAGCG
GCGGAGGCGGTGGCGGTGCCCAATCGGAGAACAATATGGAAGGGGTGAAGGATGATGATTCAAGGACCGCCGGCAGCCGCCATGCTATCCACCGCATTGCTTCAAAACCA
AATGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAACCCATTTCCCTATCCTTCTACTCGCCATCTTCCTAGCCATTGCAACTCACCAAATCCAGGGAAGGCCTTTCAAACCTCAAATGCCTCTCCACTCCTCTCCGAG
CGTCGTCGGTTTTGGCCAGTCTGATACCGGTAGCAAAGACGATTTTCGCCCGACAATGCCTGGAAACAGCCCTGGAGTTGGCCATCATTCAGTCAAGAAAAGCGGCAGCG
GCGGAGGCGGTGGCGGTGCCCAATCGGAGAACAATATGGAAGGGGTGAAGGATGATGATTCAAGGACCGCCGGCAGCCGCCATGCTATCCACCGCATTGCTTCAAAACCA
AATGCTTAG
Protein sequenceShow/hide protein sequence
MATHFPILLLAIFLAIATHQIQGRPFKPQMPLHSSPSVVGFGQSDTGSKDDFRPTMPGNSPGVGHHSVKKSGSGGGGGGAQSENNMEGVKDDDSRTAGSRHAIHRIASKP
NA