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Carg11652 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11652
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane protein
Genome locationCarg_Chr02:3147278..3147859
RNA-Seq ExpressionCarg11652
SyntenyCarg11652
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035234.1 hypothetical protein SDJN02_02029, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-103100Show/hide
Query:  MADYGNQTPNQIKNQYDQLNNRRYIPKDSALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLFLIFLALIFLTQSQSRLQCRHCWIPIALLTLAHLA
        MADYGNQTPNQIKNQYDQLNNRRYIPKDSALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLFLIFLALIFLTQSQSRLQCRHCWIPIALLTLAHLA
Subjt:  MADYGNQTPNQIKNQYDQLNNRRYIPKDSALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLFLIFLALIFLTQSQSRLQCRHCWIPIALLTLAHLA

Query:  FYVSVAHTLRCINGFKYQRRCHKLTLGLATEKLREMKMSSSDGDMEDEELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLLCF
        FYVSVAHTLRCINGFKYQRRCHKLTLGLATEKLREMKMSSSDGDMEDEELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLLCF
Subjt:  FYVSVAHTLRCINGFKYQRRCHKLTLGLATEKLREMKMSSSDGDMEDEELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLLCF
XP_022948147.1 uncharacterized protein LOC111451812 [Cucurbita moschata]3.1e-10197.93Show/hide
Query:  MADYGNQTPNQIKNQYDQLNNRRYIPKDSALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLFLIFLALIFLTQSQSRLQCRHCWIPIALLTLAHLA
        MADYGNQTPNQIKNQYDQLNNRR IPK+SALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLF IFLALIFLTQSQSRLQCRHCWIPIALLTLAHLA
Subjt:  MADYGNQTPNQIKNQYDQLNNRRYIPKDSALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLFLIFLALIFLTQSQSRLQCRHCWIPIALLTLAHLA

Query:  FYVSVAHTLRCINGFKYQRRCHKLTLGLATEKLREMKMSSSDGDMEDEELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLLCF
        FYVSVAHTLRCINGFKYQRRCHKLTLGLATEKLREMKMSSSDGDME+EELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLLCF
Subjt:  FYVSVAHTLRCINGFKYQRRCHKLTLGLATEKLREMKMSSSDGDMEDEELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLLCF
XP_023007278.1 uncharacterized protein LOC111499820 [Cucurbita maxima]8.8e-9692.39Show/hide
Query:  MADYGNQTPNQIKNQYDQLNNRRYIPKDSALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLFLIFLALIFLT----QSQSRLQCRHCWIPIALLTL
        MADYGNQTPNQIKNQYDQLNNRR IPK+SALEAL+TIIHLHFEKALEKKRSIDLQKKELHNQFQLF IFLAL FLT    QSQSRLQCRHCWIPIALLTL
Subjt:  MADYGNQTPNQIKNQYDQLNNRRYIPKDSALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLFLIFLALIFLT----QSQSRLQCRHCWIPIALLTL

Query:  AHLAFYVSVAHTLRCINGFKYQRRCHKLTLGLATEKLREMKMSSSDGDMEDEELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLLCF
        AHLAFYVS+AHTLRCI GFKYQRRCHKLTLGLATEKLREMKMSSSDGDME+E+LEIPHQEPPEIYFGKF+RNWALYFGFLVFIYG MVASSVSLLCF
Subjt:  AHLAFYVSVAHTLRCINGFKYQRRCHKLTLGLATEKLREMKMSSSDGDMEDEELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLLCF
XP_023534702.1 uncharacterized protein LOC111796192 [Cucurbita pepo subsp. pepo]1.2e-9793.91Show/hide
Query:  MADYGNQTPNQIKNQYDQLNNRRYIPKDSALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLFLIFLALIFLT----QSQSRLQCRHCWIPIALLTL
        MADYGNQTPNQIKNQY QLNNRR IPK+SALEALNTIIHLHF+KALEKKRSIDLQKKELHNQFQLF IFLALIFLT    QSQSRLQCRHCWIPIAL+TL
Subjt:  MADYGNQTPNQIKNQYDQLNNRRYIPKDSALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLFLIFLALIFLT----QSQSRLQCRHCWIPIALLTL

Query:  AHLAFYVSVAHTLRCINGFKYQRRCHKLTLGLATEKLREMKMSSSDGDMEDEELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLLCF
        AHLAFYVSVAHTLRCINGFKYQRRCHKL+LGLATEKLREMKMSSSDGDME+EELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLLCF
Subjt:  AHLAFYVSVAHTLRCINGFKYQRRCHKLTLGLATEKLREMKMSSSDGDMEDEELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLLCF
XP_041003153.1 uncharacterized protein LOC121248680 [Juglans microcarpa x Juglans regia]1.1e-6670.3Show/hide
Query:  MADYG--NQTPNQIKNQYDQLNNRRYIPKDSALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLFLIFLALIFLTQSQS-RLQCRHCWIPIALLTLA
        MA+Y   +QT N  + Q+ Q      IPK++A +ALNTII LHFEK LEKKRSIDLQKKELH  FQLF IFL ++FL+QSQS RLQCRHCWIPI +L+L+
Subjt:  MADYG--NQTPNQIKNQYDQLNNRRYIPKDSALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLFLIFLALIFLTQSQS-RLQCRHCWIPIALLTLA

Query:  HLAFYVSVAHTLRCINGFKYQRRCHKLTLGLATEKLREMKM--SSSDGD----MEDEELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLL
        HL FYVSVA TLRCINGFKYQRRCHKLTLGLATEKLREMKM  S++ G+    + D+E EI +QEPPE YFGKFKRNWAL+FGFL+ IYGFMV+SSV LL
Subjt:  HLAFYVSVAHTLRCINGFKYQRRCHKLTLGLATEKLREMKM--SSSDGD----MEDEELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLL

Query:  CF
        CF
Subjt:  CF
TrEMBL top hitse value%identityAlignment
A0A1S2YCN6 uncharacterized protein LOC1015024675.4e-6770.2Show/hide
Query:  MADYGNQTPNQIKNQYDQLNNRRYIPKDSALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLFLIFLALIFLTQSQS-RLQCRHCWIPIALLTLAHL
        MADY N   +Q          ++ + +D+A +ALNTII LHFEK LEKKR+IDLQKKELH  FQLF IFL+L+F+ QSQS RLQCRHCWIPI LL++AHL
Subjt:  MADYGNQTPNQIKNQYDQLNNRRYIPKDSALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLFLIFLALIFLTQSQS-RLQCRHCWIPIALLTLAHL

Query:  AFYVSVAHTLRCINGFKYQRRCHKLTLGLATEKLREMKMS-SSDGDME---DEELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLLCF
         FYVSVA TLRCINGFKYQRRCHKLTLGLATEKLR+MKM  SS GD +   DEE EI +QEPPE YFGKFKRNWAL+FGFL+ IYGFM++SSV LLCF
Subjt:  AFYVSVAHTLRCINGFKYQRRCHKLTLGLATEKLREMKMS-SSDGDME---DEELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLLCF
A0A2N9G8E6 Uncharacterized protein3.2e-6773.8Show/hide
Query:  YDQLNNRRYIPKDSALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLFLIFLALIFLTQSQS-RLQCRHCWIPIALLTLAHLAFYVSVAHTLRCING
        Y+  ++ + IPK++AL+ALNTII LHFEK LEKKRSIDLQKKELH  FQLF IFL+LIFL Q+ S RLQCRHCW+PI LL+L+HL FYVSVA TLRCING
Subjt:  YDQLNNRRYIPKDSALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLFLIFLALIFLTQSQS-RLQCRHCWIPIALLTLAHLAFYVSVAHTLRCING

Query:  FKYQRRCHKLTLGLATEKLREMKMSSS--------DGDMEDEELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLLCF
        FKYQRRCHKLTLGLATEKLREMKM  S        DG + DE+ EI +QEPPE YFGKFKRNWAL+FGFL+FIYGFMV+SSV LLCF
Subjt:  FKYQRRCHKLTLGLATEKLREMKMSSS--------DGDMEDEELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLLCF
A0A6A1VCW3 Uncharacterized protein5.4e-6771Show/hide
Query:  MADYGNQTPNQIKNQYDQLNNRRYIPKDSALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLFLIFLALIFLTQSQS-RLQCRHCWIPIALLTLAHL
        MADY     N       Q ++   IP ++AL+ALNTII LHFEK LEKKRSIDLQKKELH  FQLF IFL LIFL Q+QS RLQCRHCWIPI +L+L+HL
Subjt:  MADYGNQTPNQIKNQYDQLNNRRYIPKDSALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLFLIFLALIFLTQSQS-RLQCRHCWIPIALLTLAHL

Query:  AFYVSVAHTLRCINGFKYQRRCHKLTLGLATEKLREMKMSSSDGDME------DEELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLLCF
         FYVSVA TLRCINGFKYQRRCHKLTLGLATEKLREMKM  S G  E      D++LEI +QEPPE YFGKFKRNWAL+FGFL+ IYGFMV+SSV LLCF
Subjt:  AFYVSVAHTLRCINGFKYQRRCHKLTLGLATEKLREMKMSSSDGDME------DEELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLLCF
A0A6J1G8E2 uncharacterized protein LOC1114518121.5e-10197.93Show/hide
Query:  MADYGNQTPNQIKNQYDQLNNRRYIPKDSALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLFLIFLALIFLTQSQSRLQCRHCWIPIALLTLAHLA
        MADYGNQTPNQIKNQYDQLNNRR IPK+SALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLF IFLALIFLTQSQSRLQCRHCWIPIALLTLAHLA
Subjt:  MADYGNQTPNQIKNQYDQLNNRRYIPKDSALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLFLIFLALIFLTQSQSRLQCRHCWIPIALLTLAHLA

Query:  FYVSVAHTLRCINGFKYQRRCHKLTLGLATEKLREMKMSSSDGDMEDEELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLLCF
        FYVSVAHTLRCINGFKYQRRCHKLTLGLATEKLREMKMSSSDGDME+EELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLLCF
Subjt:  FYVSVAHTLRCINGFKYQRRCHKLTLGLATEKLREMKMSSSDGDMEDEELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLLCF
A0A6J1L793 uncharacterized protein LOC1114998204.3e-9692.39Show/hide
Query:  MADYGNQTPNQIKNQYDQLNNRRYIPKDSALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLFLIFLALIFLT----QSQSRLQCRHCWIPIALLTL
        MADYGNQTPNQIKNQYDQLNNRR IPK+SALEAL+TIIHLHFEKALEKKRSIDLQKKELHNQFQLF IFLAL FLT    QSQSRLQCRHCWIPIALLTL
Subjt:  MADYGNQTPNQIKNQYDQLNNRRYIPKDSALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLFLIFLALIFLT----QSQSRLQCRHCWIPIALLTL

Query:  AHLAFYVSVAHTLRCINGFKYQRRCHKLTLGLATEKLREMKMSSSDGDMEDEELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLLCF
        AHLAFYVS+AHTLRCI GFKYQRRCHKLTLGLATEKLREMKMSSSDGDME+E+LEIPHQEPPEIYFGKF+RNWALYFGFLVFIYG MVASSVSLLCF
Subjt:  AHLAFYVSVAHTLRCINGFKYQRRCHKLTLGLATEKLREMKMSSSDGDMEDEELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLLCF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G18800.1 unknown protein1.4e-6261.65Show/hide
Query:  MADYGNQTPNQIKNQYDQLNNRRYIPKDSALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLFLIFLALIF--LTQSQSRLQCRHCWIPIALLTLAH
        MADY         ++ DQ NN+ +IPK++AL+ALN+II LHFEK LEKKR+ID QKK+LH  FQLF IFLA+IF  L+Q   RL CRHCW PI LL+ +H
Subjt:  MADYGNQTPNQIKNQYDQLNNRRYIPKDSALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLFLIFLALIF--LTQSQSRLQCRHCWIPIALLTLAH

Query:  LAFYVSVAHTLRCINGFKYQRRCHKLTLGLATEKLREMK--------MSSSDGDMEDE---ELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASS
        L FYVSVA TLRCINGFKYQRRCHKLTLGLAT KLR +K        +   DGD       +LE+P+QEPP+ YFGKFKRNWALYFGFL+ +Y FM++ S
Subjt:  LAFYVSVAHTLRCINGFKYQRRCHKLTLGLATEKLREMK--------MSSSDGDMEDE---ELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASS

Query:  VSLLCF
        V +LCF
Subjt:  VSLLCF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACTACGGAAATCAAACGCCGAATCAGATTAAAAATCAGTATGATCAACTCAACAACCGCCGCTACATACCTAAGGATTCAGCTCTCGAAGCCTTGAACACCAT
AATCCATCTACATTTCGAGAAAGCCCTAGAAAAGAAGCGCTCAATCGATCTCCAAAAGAAGGAGCTCCACAACCAATTCCAGCTCTTCCTCATCTTTTTAGCTCTCATTT
TCCTCACTCAATCGCAATCTCGGCTACAGTGCCGGCATTGCTGGATCCCGATCGCTCTCCTAACCCTAGCGCATTTGGCCTTCTACGTATCCGTGGCTCACACACTGCGA
TGCATCAACGGATTCAAGTACCAAAGGCGATGCCACAAGCTGACTCTGGGATTGGCGACGGAGAAGCTTAGGGAGATGAAGATGAGTAGCAGCGACGGAGACATGGAGGA
CGAGGAGTTGGAGATTCCGCACCAGGAGCCTCCTGAGATTTACTTTGGTAAGTTCAAGAGGAATTGGGCGCTGTATTTTGGGTTCTTGGTGTTCATCTATGGATTTATGG
TGGCTTCCTCTGTTTCTCTTCTCTGTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGACTACGGAAATCAAACGCCGAATCAGATTAAAAATCAGTATGATCAACTCAACAACCGCCGCTACATACCTAAGGATTCAGCTCTCGAAGCCTTGAACACCAT
AATCCATCTACATTTCGAGAAAGCCCTAGAAAAGAAGCGCTCAATCGATCTCCAAAAGAAGGAGCTCCACAACCAATTCCAGCTCTTCCTCATCTTTTTAGCTCTCATTT
TCCTCACTCAATCGCAATCTCGGCTACAGTGCCGGCATTGCTGGATCCCGATCGCTCTCCTAACCCTAGCGCATTTGGCCTTCTACGTATCCGTGGCTCACACACTGCGA
TGCATCAACGGATTCAAGTACCAAAGGCGATGCCACAAGCTGACTCTGGGATTGGCGACGGAGAAGCTTAGGGAGATGAAGATGAGTAGCAGCGACGGAGACATGGAGGA
CGAGGAGTTGGAGATTCCGCACCAGGAGCCTCCTGAGATTTACTTTGGTAAGTTCAAGAGGAATTGGGCGCTGTATTTTGGGTTCTTGGTGTTCATCTATGGATTTATGG
TGGCTTCCTCTGTTTCTCTTCTCTGTTTCTGA
Protein sequenceShow/hide protein sequence
MADYGNQTPNQIKNQYDQLNNRRYIPKDSALEALNTIIHLHFEKALEKKRSIDLQKKELHNQFQLFLIFLALIFLTQSQSRLQCRHCWIPIALLTLAHLAFYVSVAHTLR
CINGFKYQRRCHKLTLGLATEKLREMKMSSSDGDMEDEELEIPHQEPPEIYFGKFKRNWALYFGFLVFIYGFMVASSVSLLCF