; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg11659 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11659
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiongolgin candidate 5-like
Genome locationCarg_Chr02:3229461..3232302
RNA-Seq ExpressionCarg11659
SyntenyCarg11659
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR022091 - TATA element modulatory factor 1, TATA binding


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605279.1 Golgin candidate 5, partial [Cucurbita argyrosperma subsp. sororia]1.3e-70100Show/hide
Query:  MEESYFLQTSLGSSDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRH
        MEESYFLQTSLGSSDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRH
Subjt:  MEESYFLQTSLGSSDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRH

Query:  SAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA
        SAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA
Subjt:  SAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA

KAG7035241.1 Golgin candidate 5, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-70100Show/hide
Query:  MEESYFLQTSLGSSDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRH
        MEESYFLQTSLGSSDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRH
Subjt:  MEESYFLQTSLGSSDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRH

Query:  SAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA
        SAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA
Subjt:  SAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA

XP_023007438.1 golgin candidate 5-like [Cucurbita maxima]9.3e-6997.99Show/hide
Query:  MEESYFLQTSLGSSDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRH
        MEESYFLQ SLGSSDRKITGDI MGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRH
Subjt:  MEESYFLQTSLGSSDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRH

Query:  SAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA
        +AALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA
Subjt:  SAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA

XP_023533524.1 golgin candidate 5-like isoform X1 [Cucurbita pepo subsp. pepo]8.4e-7098.66Show/hide
Query:  MEESYFLQTSLGSSDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRH
        MEESYFLQ SLGSSDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSR+KSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRH
Subjt:  MEESYFLQTSLGSSDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRH

Query:  SAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA
        SAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA
Subjt:  SAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA

XP_023533525.1 golgin candidate 5-like isoform X2 [Cucurbita pepo subsp. pepo]8.4e-7098.66Show/hide
Query:  MEESYFLQTSLGSSDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRH
        MEESYFLQ SLGSSDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSR+KSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRH
Subjt:  MEESYFLQTSLGSSDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRH

Query:  SAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA
        SAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA
Subjt:  SAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA

TrEMBL top hitse value%identityAlignment
A0A0A0LQ56 TMF_TATA_bd domain-containing protein2.6e-6190.6Show/hide
Query:  MEESYFLQTSLGS----SDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEAL
        MEESYFLQ SLGS    SDRKITGD+PM PYYMKSM   S EAALRQKEGEL SYVSRLKSIE IRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEAL
Subjt:  MEESYFLQTSLGS----SDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEAL

Query:  RRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSS
        RRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQ+MSSS
Subjt:  RRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSS

A0A1S3CE12 golgin candidate 55.3e-6290.26Show/hide
Query:  MEESYFLQTSLGS----SDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEAL
        MEESYFLQ SLGS    SDRKITGD+PM PYYMKSM   S EAALRQKEGEL SYVSRLKSIE IRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEAL
Subjt:  MEESYFLQTSLGS----SDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEAL

Query:  RRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVM-SSSMGTA
        RRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQ+M SSSMGTA
Subjt:  RRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVM-SSSMGTA

A0A6J1G6X1 golgin candidate 5-like isoform X12.2e-6898.66Show/hide
Query:  MEESYFLQTSLGSSDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRH
        MEESYFL  SLGSSDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRH
Subjt:  MEESYFLQTSLGSSDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRH

Query:  SAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA
        SAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA
Subjt:  SAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA

A0A6J1G7A8 golgin candidate 5-like isoform X22.2e-6898.66Show/hide
Query:  MEESYFLQTSLGSSDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRH
        MEESYFL  SLGSSDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRH
Subjt:  MEESYFLQTSLGSSDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRH

Query:  SAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA
        SAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA
Subjt:  SAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA

A0A6J1L7N6 golgin candidate 5-like4.5e-6997.99Show/hide
Query:  MEESYFLQTSLGSSDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRH
        MEESYFLQ SLGSSDRKITGDI MGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRH
Subjt:  MEESYFLQTSLGSSDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRH

Query:  SAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA
        +AALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA
Subjt:  SAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA

SwissProt top hitse value%identityAlignment
B9EKI3 TATA element modulatory factor8.3e-1234.95Show/hide
Query:  SFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLL
        + ++ L+ +EGE++     + ++E  R  ++EELVKLT+Q+++L  +   +P +R +L  L +R++  L++ GE+ EE EELR D+ D+K MY+ Q++ L
Subjt:  SFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLL

Query:  VNK
        + +
Subjt:  VNK

P82094 TATA element modulatory factor2.2e-1236.89Show/hide
Query:  SFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLL
        + ++ L+ +EGE+T     + ++E  R  +AEELVKLT+Q+++L  +   +P +R +L  L +R++  L++ GE+ EE EELR D+ D+K MY+ Q++ L
Subjt:  SFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLL

Query:  VNK
        + +
Subjt:  VNK

Q0WVL7 Golgin candidate 51.7e-4973.61Show/hide
Query:  MEESYFLQTSLGSSD----RKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEAL
        MEESYFLQ SL SSD    ++   +  M PYYMKS+ PS++EA LRQKEGEL SY++RL S+E IRDSLAEELVK+T++ EKLR EA  +PGI+AELEAL
Subjt:  MEESYFLQTSLGSSD----RKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEAL

Query:  RRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQ
        R+RH+AALELMGERDEELEELRADIVDLKEMYREQVN+LVNKIQ
Subjt:  RRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQ

Arabidopsis top hitse value%identityAlignment
AT1G79830.1 golgin candidate 51.2e-5073.61Show/hide
Query:  MEESYFLQTSLGSSD----RKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEAL
        MEESYFLQ SL SSD    ++   +  M PYYMKS+ PS++EA LRQKEGEL SY++RL S+E IRDSLAEELVK+T++ EKLR EA  +PGI+AELEAL
Subjt:  MEESYFLQTSLGSSD----RKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEAL

Query:  RRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQ
        R+RH+AALELMGERDEELEELRADIVDLKEMYREQVN+LVNKIQ
Subjt:  RRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQ

AT1G79830.2 golgin candidate 51.2e-5073.61Show/hide
Query:  MEESYFLQTSLGSSD----RKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEAL
        MEESYFLQ SL SSD    ++   +  M PYYMKS+ PS++EA LRQKEGEL SY++RL S+E IRDSLAEELVK+T++ EKLR EA  +PGI+AELEAL
Subjt:  MEESYFLQTSLGSSD----RKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEAL

Query:  RRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQ
        R+RH+AALELMGERDEELEELRADIVDLKEMYREQVN+LVNKIQ
Subjt:  RRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQ

AT1G79830.3 golgin candidate 51.2e-5073.61Show/hide
Query:  MEESYFLQTSLGSSD----RKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEAL
        MEESYFLQ SL SSD    ++   +  M PYYMKS+ PS++EA LRQKEGEL SY++RL S+E IRDSLAEELVK+T++ EKLR EA  +PGI+AELEAL
Subjt:  MEESYFLQTSLGSSD----RKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEAL

Query:  RRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQ
        R+RH+AALELMGERDEELEELRADIVDLKEMYREQVN+LVNKIQ
Subjt:  RRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQ

AT1G79830.4 golgin candidate 51.2e-5073.61Show/hide
Query:  MEESYFLQTSLGSSD----RKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEAL
        MEESYFLQ SL SSD    ++   +  M PYYMKS+ PS++EA LRQKEGEL SY++RL S+E IRDSLAEELVK+T++ EKLR EA  +PGI+AELEAL
Subjt:  MEESYFLQTSLGSSD----RKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEAL

Query:  RRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQ
        R+RH+AALELMGERDEELEELRADIVDLKEMYREQVN+LVNKIQ
Subjt:  RRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAAGCTATTTTCTTCAAACATCTTTAGGCTCGTCTGATAGAAAAATCACTGGGGACATACCCATGGGTCCATACTATATGAAGAGCATGAATCCTAGTTCTTT
TGAGGCTGCCCTTCGTCAGAAGGAAGGGGAACTTACATCTTATGTCTCTCGACTGAAATCAATTGAAATGATCCGTGACTCTCTTGCTGAGGAGCTAGTGAAACTGACCT
CTCAGAGTGAGAAGTTAAGGGCAGAGGCCGGTATGTTACCAGGCATACGAGCAGAACTTGAAGCACTGAGGAGAAGGCACTCTGCTGCGTTAGAGCTCATGGGAGAACGT
GATGAGGAGCTGGAGGAACTTCGTGCAGATATTGTTGACTTGAAGGAGATGTACAGAGAACAAGTAAACTTGCTTGTGAACAAGATTCAGGTAATGAGTTCATCAATGGG
TACAGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAAGCTATTTTCTTCAAACATCTTTAGGCTCGTCTGATAGAAAAATCACTGGGGACATACCCATGGGTCCATACTATATGAAGAGCATGAATCCTAGTTCTTT
TGAGGCTGCCCTTCGTCAGAAGGAAGGGGAACTTACATCTTATGTCTCTCGACTGAAATCAATTGAAATGATCCGTGACTCTCTTGCTGAGGAGCTAGTGAAACTGACCT
CTCAGAGTGAGAAGTTAAGGGCAGAGGCCGGTATGTTACCAGGCATACGAGCAGAACTTGAAGCACTGAGGAGAAGGCACTCTGCTGCGTTAGAGCTCATGGGAGAACGT
GATGAGGAGCTGGAGGAACTTCGTGCAGATATTGTTGACTTGAAGGAGATGTACAGAGAACAAGTAAACTTGCTTGTGAACAAGATTCAGGTAATGAGTTCATCAATGGG
TACAGCCTGATAAGTGACTTCATATAGCGCCCAACAAAGCTAAGCGAGTGGTTAAAACTCGGCCATTAAGATTGAGATGGGCGGTAAGATGGTTGGTATTGAGATTTTTG
TGCATGGACTGAATACTTGAACGGAAACTACATTTTTGAAAGCGTTACACACAAGTTCCAATAGCGTTGTATTTGACAGTATACCTTCATTTTTAGTGTACATTAGAGAA
TCGAGTGATAGTTTCAAGACGTTAATAAGATTCCATTTTGGCCTTACCAAAAGTTGCTACATCAATATCCAGCTGTGTATAGGTTTAAATCTATGATCAGAGTAGAGATT
TGTAAGAACTTGGTATCCCATTGTTGCTTTTGATGGAAATGAAGAACAATGTATTTGATCTTTGAAGCTGTAGAGAATCAAGGCAAACAAAATTCAAAATATTCATAACC
CACTTCTTTATGTTCATTTTTTTTTT
Protein sequenceShow/hide protein sequence
MEESYFLQTSLGSSDRKITGDIPMGPYYMKSMNPSSFEAALRQKEGELTSYVSRLKSIEMIRDSLAEELVKLTSQSEKLRAEAGMLPGIRAELEALRRRHSAALELMGER
DEELEELRADIVDLKEMYREQVNLLVNKIQVMSSSMGTA