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Carg11664 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11664
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionWD_REPEATS_REGION domain-containing protein
Genome locationCarg_Chr02:3301134..3301824
RNA-Seq ExpressionCarg11664
SyntenyCarg11664
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605288.1 S-adenosylmethionine carrier 1, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]6.9e-9598.88Show/hide
Query:  NNCKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKVTNFCPLTIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQ
        NNC NLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKVTNFCPLTIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQ
Subjt:  NNCKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKVTNFCPLTIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQ

Query:  YDAKADNVLENERLCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCTLVYDIRVYSIADC
        YDAKA+NVLENERLCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCTLVYDIRVYSIADC
Subjt:  YDAKADNVLENERLCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCTLVYDIRVYSIADC

KAG7035246.1 hypothetical protein SDJN02_02041, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-96100Show/hide
Query:  NNCKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKVTNFCPLTIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQ
        NNCKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKVTNFCPLTIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQ
Subjt:  NNCKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKVTNFCPLTIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQ

Query:  YDAKADNVLENERLCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCTLVYDIRVYSIADC
        YDAKADNVLENERLCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCTLVYDIRVYSIADC
Subjt:  YDAKADNVLENERLCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCTLVYDIRVYSIADC

XP_022947738.1 uncharacterized protein LOC111451512 [Cucurbita moschata]4.8e-96100Show/hide
Query:  NNCKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKVTNFCPLTIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQ
        NNCKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKVTNFCPLTIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQ
Subjt:  NNCKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKVTNFCPLTIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQ

Query:  YDAKADNVLENERLCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCTLVYDIRVYSIADC
        YDAKADNVLENERLCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCTLVYDIRVYSIADC
Subjt:  YDAKADNVLENERLCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCTLVYDIRVYSIADC

XP_023007549.1 uncharacterized protein LOC111500010 [Cucurbita maxima]1.0e-9397.75Show/hide
Query:  NNCKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKVTNFCPLTIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQ
        NNCKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKV NFCPLTIEMNPLITFNPPA ESL+MEEQTVVECLRVVGLKIWQ
Subjt:  NNCKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKVTNFCPLTIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQ

Query:  YDAKADNVLENERLCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCTLVYDIRVYSIADC
        YDAKA NVLENERLCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCTLVYDIRVYSIADC
Subjt:  YDAKADNVLENERLCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCTLVYDIRVYSIADC

XP_023534521.1 uncharacterized protein LOC111796064 [Cucurbita pepo subsp. pepo]4.8e-96100Show/hide
Query:  NNCKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKVTNFCPLTIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQ
        NNCKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKVTNFCPLTIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQ
Subjt:  NNCKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKVTNFCPLTIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQ

Query:  YDAKADNVLENERLCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCTLVYDIRVYSIADC
        YDAKADNVLENERLCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCTLVYDIRVYSIADC
Subjt:  YDAKADNVLENERLCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCTLVYDIRVYSIADC

TrEMBL top hitse value%identityAlignment
A0A1U8NWR3 uncharacterized protein LOC107952744 isoform X21.9e-0539.58Show/hide
Query:  VGLKIWQYDAKADNVLENE---RLCIPNVVLNCERSADISPCGKFL---VACVVNRQKADEKIFKLFYEQLDDSTLCT--------LVYDIRVYSI
        V LK+W YD K    L N    RL IP+ VL  E  A  SPCGKFL   VACV+   +AD ++  L ++     T  T        +VY++R+YS+
Subjt:  VGLKIWQYDAKADNVLENE---RLCIPNVVLNCERSADISPCGKFL---VACVVNRQKADEKIFKLFYEQLDDSTLCT--------LVYDIRVYSI

A0A1U8NX08 uncharacterized protein LOC107952744 isoform X11.9e-0539.58Show/hide
Query:  VGLKIWQYDAKADNVLENE---RLCIPNVVLNCERSADISPCGKFL---VACVVNRQKADEKIFKLFYEQLDDSTLCT--------LVYDIRVYSI
        V LK+W YD K    L N    RL IP+ VL  E  A  SPCGKFL   VACV+   +AD ++  L ++     T  T        +VY++R+YS+
Subjt:  VGLKIWQYDAKADNVLENE---RLCIPNVVLNCERSADISPCGKFL---VACVVNRQKADEKIFKLFYEQLDDSTLCT--------LVYDIRVYSI

A0A6J1G7S8 uncharacterized protein LOC1114515122.3e-96100Show/hide
Query:  NNCKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKVTNFCPLTIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQ
        NNCKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKVTNFCPLTIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQ
Subjt:  NNCKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKVTNFCPLTIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQ

Query:  YDAKADNVLENERLCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCTLVYDIRVYSIADC
        YDAKADNVLENERLCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCTLVYDIRVYSIADC
Subjt:  YDAKADNVLENERLCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCTLVYDIRVYSIADC

A0A6J1L591 uncharacterized protein LOC1115000104.8e-9497.75Show/hide
Query:  NNCKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKVTNFCPLTIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQ
        NNCKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKV NFCPLTIEMNPLITFNPPA ESL+MEEQTVVECLRVVGLKIWQ
Subjt:  NNCKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKVTNFCPLTIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQ

Query:  YDAKADNVLENERLCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCTLVYDIRVYSIADC
        YDAKA NVLENERLCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCTLVYDIRVYSIADC
Subjt:  YDAKADNVLENERLCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCTLVYDIRVYSIADC

A0A7J9DC79 WD_REPEATS_REGION domain-containing protein1.9e-0539.58Show/hide
Query:  VGLKIWQYDAKADNVLENE---RLCIPNVVLNCERSADISPCGKFL---VACVVNRQKADEKIFKLFYEQLDDSTLCT--------LVYDIRVYSI
        V LK+W YD K    L N    RL IP+ VL  E  A  SPCGKFL   VACV+   +AD ++  L ++     T  T        +VY++R+YS+
Subjt:  VGLKIWQYDAKADNVLENE---RLCIPNVVLNCERSADISPCGKFL---VACVVNRQKADEKIFKLFYEQLDDSTLCT--------LVYDIRVYSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04140.1 Transducin family protein / WD-40 repeat family protein1.9e-0533.33Show/hide
Query:  VGLKIWQYDAKAD-NVLENE--RLCIPNVVLNCERSADISPCGKFL---VACVVNRQKADEKIFKLFYEQLDDSTLCT-----------LVYDIRVYSI
        V L++W +D K   ++L+++  RL I + VL  E  A  SPCG++L   VACV+   + D  +  L  +   DS L T           ++Y++RVYS+
Subjt:  VGLKIWQYDAKAD-NVLENE--RLCIPNVVLNCERSADISPCGKFL---VACVVNRQKADEKIFKLFYEQLDDSTLCT-----------LVYDIRVYSI

AT1G04140.2 Transducin family protein / WD-40 repeat family protein1.9e-0533.33Show/hide
Query:  VGLKIWQYDAKAD-NVLENE--RLCIPNVVLNCERSADISPCGKFL---VACVVNRQKADEKIFKLFYEQLDDSTLCT-----------LVYDIRVYSI
        V L++W +D K   ++L+++  RL I + VL  E  A  SPCG++L   VACV+   + D  +  L  +   DS L T           ++Y++RVYS+
Subjt:  VGLKIWQYDAKAD-NVLENE--RLCIPNVVLNCERSADISPCGKFL---VACVVNRQKADEKIFKLFYEQLDDSTLCT-----------LVYDIRVYSI

AT5G43930.1 Transducin family protein / WD-40 repeat family protein1.6e-0433.33Show/hide
Query:  VGLKIWQYDAKADNV-LENER--LCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCT-----------LVYDIRVYSI
        V L++W +D K     L+++R    IP+ VL  E  A  SPCG++L ACV       E    L  +   DS L T           ++Y++RVYS+
Subjt:  VGLKIWQYDAKADNV-LENER--LCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCT-----------LVYDIRVYSI

AT5G43930.2 Transducin family protein / WD-40 repeat family protein1.6e-0433.33Show/hide
Query:  VGLKIWQYDAKADNV-LENER--LCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCT-----------LVYDIRVYSI
        V L++W +D K     L+++R    IP+ VL  E  A  SPCG++L ACV       E    L  +   DS L T           ++Y++RVYS+
Subjt:  VGLKIWQYDAKADNV-LENER--LCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCT-----------LVYDIRVYSI

AT5G43930.3 Transducin family protein / WD-40 repeat family protein1.6e-0433.33Show/hide
Query:  VGLKIWQYDAKADNV-LENER--LCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCT-----------LVYDIRVYSI
        V L++W +D K     L+++R    IP+ VL  E  A  SPCG++L ACV       E    L  +   DS L T           ++Y++RVYS+
Subjt:  VGLKIWQYDAKADNV-LENER--LCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCT-----------LVYDIRVYSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATAATTGTAAAAACCTCAAACGTAGCGTGCTAATTACGTTTAGATCTTATCATCCAGAAGGGTCAAATGATATACTGTTGACCACTACATCTACTGCACCAGATTTTTC
AATCGTTGTGGATGAAAGTGCTGAGGCTGCATCAACATTCCGGATTCGTCGAAAAGTTACTAATTTTTGTCCATTAACTATTGAGATGAACCCTCTTATTACCTTCAATC
CACCCGCAAGCGAGAGCTTGATTATGGAGGAACAAACTGTGGTGGAATGCCTCCGTGTTGTGGGACTGAAGATTTGGCAATATGATGCCAAAGCTGACAATGTGCTTGAA
AACGAACGTTTATGCATACCAAACGTCGTTCTGAACTGTGAAAGGAGTGCAGACATCTCCCCATGCGGCAAATTCCTGGTTGCTTGTGTTGTTAATCGACAGAAAGCCGA
CGAGAAGATCTTCAAATTATTTTACGAGCAGCTTGATGATTCTACACTTTGTACGCTCGTATATGATATAAGGGTGTATTCTATAGCAGATTGC
mRNA sequenceShow/hide mRNA sequence
AATAATTGTAAAAACCTCAAACGTAGCGTGCTAATTACGTTTAGATCTTATCATCCAGAAGGGTCAAATGATATACTGTTGACCACTACATCTACTGCACCAGATTTTTC
AATCGTTGTGGATGAAAGTGCTGAGGCTGCATCAACATTCCGGATTCGTCGAAAAGTTACTAATTTTTGTCCATTAACTATTGAGATGAACCCTCTTATTACCTTCAATC
CACCCGCAAGCGAGAGCTTGATTATGGAGGAACAAACTGTGGTGGAATGCCTCCGTGTTGTGGGACTGAAGATTTGGCAATATGATGCCAAAGCTGACAATGTGCTTGAA
AACGAACGTTTATGCATACCAAACGTCGTTCTGAACTGTGAAAGGAGTGCAGACATCTCCCCATGCGGCAAATTCCTGGTTGCTTGTGTTGTTAATCGACAGAAAGCCGA
CGAGAAGATCTTCAAATTATTTTACGAGCAGCTTGATGATTCTACACTTTGTACGCTCGTATATGATATAAGGGTGTATTCTATAGCAGATTGC
Protein sequenceShow/hide protein sequence
NNCKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKVTNFCPLTIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQYDAKADNVLE
NERLCIPNVVLNCERSADISPCGKFLVACVVNRQKADEKIFKLFYEQLDDSTLCTLVYDIRVYSIADC