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Carg11673 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg11673
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr02:3389878..3390373
RNA-Seq ExpressionCarg11673
SyntenyCarg11673
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605297.1 hypothetical protein SDJN03_02614, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3898.91Show/hide
Query:  MFNFEDELIIQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQ
        MFNFEDELIIQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSSTSNSRFVSEI+HNHKNVSMHNIRIDSDPSRNAQ
Subjt:  MFNFEDELIIQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQ

KAG7035255.1 hypothetical protein SDJN02_02050 [Cucurbita argyrosperma subsp. argyrosperma]3.1e-41100Show/hide
Query:  MFNFEDELIIQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQQFLA
        MFNFEDELIIQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQQFLA
Subjt:  MFNFEDELIIQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQQFLA

XP_022948005.1 uncharacterized protein LOC111451714 isoform X1 [Cucurbita moschata]1.1e-3898.91Show/hide
Query:  MFNFEDELIIQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQ
        MFNFEDELI+QPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQ
Subjt:  MFNFEDELIIQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQ

XP_022948006.1 uncharacterized protein LOC111451714 isoform X2 [Cucurbita moschata]8.4e-3995.79Show/hide
Query:  MFNFEDELIIQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQQFL
        MFNFEDELI+QPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQ ++
Subjt:  MFNFEDELIIQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQQFL

XP_023534758.1 uncharacterized protein LOC111796230 [Cucurbita pepo subsp. pepo]6.7e-3694.57Show/hide
Query:  MFNFEDELIIQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQ
        MFNFEDELIIQPRVSWLIWIQLLLLIL+FA YCLTIFAIDFSKI+TVGNSTAAIASSSSTS SRFVSEIAHNHKNVSMHNI IDSDPSRNAQ
Subjt:  MFNFEDELIIQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQ

TrEMBL top hitse value%identityAlignment
A0A6J1G823 uncharacterized protein LOC111451714 isoform X24.1e-3995.79Show/hide
Query:  MFNFEDELIIQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQQFL
        MFNFEDELI+QPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQ ++
Subjt:  MFNFEDELIIQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQQFL

A0A6J1G8H3 uncharacterized protein LOC111451714 isoform X15.3e-3998.91Show/hide
Query:  MFNFEDELIIQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQ
        MFNFEDELI+QPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQ
Subjt:  MFNFEDELIIQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQ

A0A6J1I2P0 uncharacterized protein LOC1114703677.2e-2065.22Show/hide
Query:  MFNFEDELIIQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQ
        MFNFEDELI++P VSWLIWIQLL++IL+FALYCLT+FA+DFSK  T  NS+AAIASSS+T   RFV + A   KN+   N RIDS+  R AQ
Subjt:  MFNFEDELIIQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQ

A0A6J1L017 uncharacterized protein LOC111499795 isoform X22.3e-3492.47Show/hide
Query:  MFNFEDELIIQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAI-ASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQ
        MFNFEDELIIQPRVSWLIWIQLLLLIL+FALYCLTIFAIDFSKI+T  NSTAAI +SSSSTS SRFVSEIAHNHKNVSMHNIRIDSDPSRNAQ
Subjt:  MFNFEDELIIQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAI-ASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQ

A0A6J1L2G9 uncharacterized protein LOC111499795 isoform X12.3e-3492.47Show/hide
Query:  MFNFEDELIIQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAI-ASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQ
        MFNFEDELIIQPRVSWLIWIQLLLLIL+FALYCLTIFAIDFSKI+T  NSTAAI +SSSSTS SRFVSEIAHNHKNVSMHNIRIDSDPSRNAQ
Subjt:  MFNFEDELIIQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAI-ASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAATTTTGAAGATGAGCTCATAATTCAACCCCGAGTTTCGTGGTTAATCTGGATTCAGCTTCTTCTTCTTATCCTCCTCTTCGCGCTTTATTGTCTCACCATCTT
CGCCATTGATTTCTCCAAAATCGATACCGTCGGCAACTCCACTGCCGCCATTGCTTCTTCTTCTTCTACTTCTAATAGTCGCTTCGTTTCTGAAATTGCTCACAACCACA
AGAATGTTTCTATGCACAATATCAGGATTGATTCTGATCCATCGCGGAATGCGCAGCAATTCTTGGCTTGA
mRNA sequenceShow/hide mRNA sequence
AAGAGGATAAGGTAATTTTTGTGAACTTTTCTTAGACCTTCCCCTGTTTAGGTATTGAAATCGGAAGCTGAATCCAAATCATTCTCTCTATGAAATTCTCGTTTGCCCTA
ATATGTTCAATTTTGAAGATGAGCTCATAATTCAACCCCGAGTTTCGTGGTTAATCTGGATTCAGCTTCTTCTTCTTATCCTCCTCTTCGCGCTTTATTGTCTCACCATC
TTCGCCATTGATTTCTCCAAAATCGATACCGTCGGCAACTCCACTGCCGCCATTGCTTCTTCTTCTTCTACTTCTAATAGTCGCTTCGTTTCTGAAATTGCTCACAACCA
CAAGAATGTTTCTATGCACAATATCAGGATTGATTCTGATCCATCGCGGAATGCGCAGCAATTCTTGGCTTGA
Protein sequenceShow/hide protein sequence
MFNFEDELIIQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSSTSNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQQFLA